SRR13207073.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 13971298 lines in total Total number of methylation call strings processed: 27942596 Final Cytosine Methylation Report ================================= Total number of C's analysed: 386217710 Total methylated C's in CpG context: 5524441 Total methylated C's in CHG context: 592152 Total methylated C's in CHH context: 4087589 Total C to T conversions in CpG context: 43288736 Total C to T conversions in CHG context: 66417259 Total C to T conversions in CHH context: 266307533 C methylated in CpG context: 11.3% C methylated in non-CpG context: 1.4%