SRR13207070.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 13738923 lines in total Total number of methylation call strings processed: 27477846 Final Cytosine Methylation Report ================================= Total number of C's analysed: 388854286 Total methylated C's in CpG context: 5267414 Total methylated C's in CHG context: 572217 Total methylated C's in CHH context: 3867961 Total C to T conversions in CpG context: 43539933 Total C to T conversions in CHG context: 66318381 Total C to T conversions in CHH context: 269288380 C methylated in CpG context: 10.8% C methylated in non-CpG context: 1.3%