SRR13207068.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 13636552 lines in total Total number of methylation call strings processed: 27273104 Final Cytosine Methylation Report ================================= Total number of C's analysed: 383673321 Total methylated C's in CpG context: 5231678 Total methylated C's in CHG context: 574115 Total methylated C's in CHH context: 3897136 Total C to T conversions in CpG context: 43002158 Total C to T conversions in CHG context: 65558276 Total C to T conversions in CHH context: 265409958 C methylated in CpG context: 10.8% C methylated in non-CpG context: 1.3%