SRR13207065.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 14580569 lines in total Total number of methylation call strings processed: 29161138 Final Cytosine Methylation Report ================================= Total number of C's analysed: 417794447 Total methylated C's in CpG context: 5564245 Total methylated C's in CHG context: 604653 Total methylated C's in CHH context: 4137499 Total C to T conversions in CpG context: 46590238 Total C to T conversions in CHG context: 70903006 Total C to T conversions in CHH context: 289994806 C methylated in CpG context: 10.7% C methylated in non-CpG context: 1.3%