SRR13207063.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 13324890 lines in total Total number of methylation call strings processed: 26649780 Final Cytosine Methylation Report ================================= Total number of C's analysed: 369800741 Total methylated C's in CpG context: 4850676 Total methylated C's in CHG context: 528409 Total methylated C's in CHH context: 3584921 Total C to T conversions in CpG context: 41375345 Total C to T conversions in CHG context: 62634244 Total C to T conversions in CHH context: 256827146 C methylated in CpG context: 10.5% C methylated in non-CpG context: 1.3%