SRR13207057.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 12838953 lines in total Total number of methylation call strings processed: 25677906 Final Cytosine Methylation Report ================================= Total number of C's analysed: 337570873 Total methylated C's in CpG context: 4888855 Total methylated C's in CHG context: 533226 Total methylated C's in CHH context: 3750226 Total C to T conversions in CpG context: 38045604 Total C to T conversions in CHG context: 58287501 Total C to T conversions in CHH context: 232065461 C methylated in CpG context: 11.4% C methylated in non-CpG context: 1.5%