CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 136429 637830 17.62 774259 2 130348 764876 14.56 895224 3 154032 978362 13.60 1132394 4 157102 952184 14.16 1109286 5 150944 928783 13.98 1079727 6 153051 951112 13.86 1104163 7 151977 911327 14.29 1063304 8 157513 957157 14.13 1114670 9 154342 941277 14.09 1095619 10 154858 956772 13.93 1111630 11 157542 958201 14.12 1115743 12 152278 930106 14.07 1082384 13 153650 938123 14.07 1091773 14 153281 935029 14.08 1088310 15 153659 927989 14.21 1081648 16 156614 936794 14.32 1093408 17 156516 932015 14.38 1088531 18 156234 934743 14.32 1090977 19 155728 935274 14.27 1091002 20 156791 937360 14.33 1094151 21 157429 936981 14.38 1094410 22 156987 933911 14.39 1090898 23 157789 939250 14.38 1097039 24 157220 937488 14.36 1094708 25 157302 934667 14.41 1091969 26 157722 935913 14.42 1093635 27 157868 939932 14.38 1097800 28 157296 937726 14.36 1095022 29 158636 939756 14.44 1098392 30 158809 940832 14.44 1099641 31 158181 939248 14.41 1097429 32 158310 940666 14.41 1098976 33 159563 942193 14.48 1101756 34 158418 940400 14.42 1098818 35 159372 941749 14.47 1101121 36 158710 943346 14.40 1102056 37 159471 940050 14.50 1099521 38 159017 943801 14.42 1102818 39 159325 944845 14.43 1104170 40 159495 940175 14.50 1099670 41 159710 945245 14.45 1104955 42 159556 943934 14.46 1103490 43 159253 943743 14.44 1102996 44 159910 942688 14.50 1102598 45 159860 945783 14.46 1105643 46 159145 943888 14.43 1103033 47 159409 943704 14.45 1103113 48 159894 946799 14.45 1106693 49 159077 942957 14.43 1102034 50 159871 943657 14.49 1103528 51 159627 945214 14.45 1104841 52 159383 944669 14.44 1104052 53 159416 944480 14.44 1103896 54 159494 943697 14.46 1103191 55 158955 942910 14.43 1101865 56 159154 942837 14.44 1101991 57 158490 945299 14.36 1103789 58 159153 942046 14.45 1101199 59 158546 942812 14.40 1101358 60 158572 944305 14.38 1102877 61 158240 941421 14.39 1099661 62 158154 943778 14.35 1101932 63 158438 944299 14.37 1102737 64 158470 943185 14.38 1101655 65 157699 942348 14.34 1100047 66 158131 942517 14.37 1100648 67 158252 941024 14.40 1099276 68 157987 940595 14.38 1098582 69 157201 939706 14.33 1096907 70 156727 937037 14.33 1093764 71 156642 940675 14.27 1097317 72 157150 940384 14.32 1097534 73 156966 938799 14.32 1095765 74 156568 937863 14.31 1094431 75 155586 938068 14.23 1093654 76 155794 937347 14.25 1093141 77 155951 938959 14.24 1094910 78 155610 935567 14.26 1091177 79 155219 936514 14.22 1091733 80 154453 934917 14.18 1089370 81 154683 934159 14.21 1088842 82 153707 930375 14.18 1084082 83 154645 931298 14.24 1085943 84 153799 931967 14.17 1085766 85 152836 930990 14.10 1083826 86 152726 931163 14.09 1083889 87 152132 930593 14.05 1082725 88 152324 928244 14.10 1080568 89 151036 926272 14.02 1077308 90 151443 926180 14.05 1077623 91 150080 923248 13.98 1073328 92 149826 920248 14.00 1070074 93 150031 922392 13.99 1072423 94 149452 918441 14.00 1067893 95 149428 919004 13.99 1068432 96 148250 914719 13.95 1062969 97 147729 914710 13.90 1062439 98 147269 913859 13.88 1061128 99 147130 912513 13.88 1059643 100 146074 908709 13.85 1054783 101 145357 909863 13.78 1055220 102 144997 905312 13.81 1050309 103 144714 903206 13.81 1047920 104 143364 902031 13.71 1045395 105 143287 900892 13.72 1044179 106 142828 895805 13.75 1038633 107 141831 894762 13.68 1036593 108 141549 893831 13.67 1035380 109 140381 891020 13.61 1031401 110 140330 888919 13.63 1029249 111 139667 886958 13.60 1026625 112 137747 884171 13.48 1021918 113 138081 882675 13.53 1020756 114 136846 880032 13.46 1016878 115 136790 877012 13.49 1013802 116 135983 875488 13.44 1011471 117 135701 872707 13.46 1008408 118 133741 868421 13.35 1002162 119 134178 865717 13.42 999895 120 133212 863496 13.37 996708 121 132088 858519 13.33 990607 122 131780 856480 13.33 988260 123 131195 855117 13.30 986312 124 130135 851968 13.25 982103 125 130075 848069 13.30 978144 126 128622 845199 13.21 973821 127 128083 840986 13.22 969069 128 127664 838308 13.22 965972 129 126139 835941 13.11 962080 130 124887 830980 13.07 955867 131 124547 825977 13.10 950524 132 123334 823710 13.02 947044 133 122649 818346 13.03 940995 134 122754 816316 13.07 939070 135 121809 813480 13.02 935289 136 120828 809695 12.98 930523 137 120417 806643 12.99 927060 138 119426 802449 12.95 921875 139 117704 798099 12.85 915803 140 117146 795962 12.83 913108 141 116782 792060 12.85 908842 142 116157 786428 12.87 902585 143 114348 781802 12.76 896150 144 114165 777041 12.81 891206 145 112975 772574 12.76 885549 146 112525 771293 12.73 883818 147 111926 772569 12.65 884495 148 111054 766610 12.65 877664 149 108977 762015 12.51 870992 150 106358 756216 12.33 862574 151 99647 697539 12.50 797186 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 10805 1233080 0.87 1243885 2 14306 1426152 0.99 1440458 3 16128 1658019 0.96 1674147 4 14268 1513015 0.93 1527283 5 13336 1480130 0.89 1493466 6 14093 1485982 0.94 1500075 7 14589 1504718 0.96 1519307 8 14617 1492705 0.97 1507322 9 15170 1524874 0.99 1540044 10 15066 1509761 0.99 1524827 11 14978 1501918 0.99 1516896 12 15619 1500532 1.03 1516151 13 15482 1482466 1.03 1497948 14 15272 1487900 1.02 1503172 15 15579 1492869 1.03 1508448 16 15580 1491941 1.03 1507521 17 15887 1484603 1.06 1500490 18 15782 1489955 1.05 1505737 19 15978 1489689 1.06 1505667 20 15890 1494389 1.05 1510279 21 16236 1494038 1.08 1510274 22 16217 1494022 1.07 1510239 23 16169 1495245 1.07 1511414 24 16602 1499383 1.10 1515985 25 16161 1493511 1.07 1509672 26 16232 1497068 1.07 1513300 27 16572 1497735 1.09 1514307 28 16441 1494780 1.09 1511221 29 16555 1498792 1.09 1515347 30 16635 1500237 1.10 1516872 31 16584 1500164 1.09 1516748 32 16727 1499576 1.10 1516303 33 16354 1502739 1.08 1519093 34 16885 1501212 1.11 1518097 35 16958 1505961 1.11 1522919 36 17118 1504384 1.13 1521502 37 16835 1502316 1.11 1519151 38 17030 1502839 1.12 1519869 39 16925 1507814 1.11 1524739 40 16825 1501748 1.11 1518573 41 17243 1506832 1.13 1524075 42 17387 1508274 1.14 1525661 43 17251 1502312 1.14 1519563 44 16902 1509263 1.11 1526165 45 17228 1508418 1.13 1525646 46 17475 1503055 1.15 1520530 47 17291 1507465 1.13 1524756 48 17320 1507948 1.14 1525268 49 17055 1503569 1.12 1520624 50 17078 1505733 1.12 1522811 51 17575 1509179 1.15 1526754 52 17562 1504862 1.15 1522424 53 17218 1508325 1.13 1525543 54 17398 1508245 1.14 1525643 55 17450 1506169 1.15 1523619 56 17613 1505368 1.16 1522981 57 17604 1507381 1.15 1524985 58 17445 1502864 1.15 1520309 59 17530 1504076 1.15 1521606 60 17750 1505130 1.17 1522880 61 17507 1500727 1.15 1518234 62 17843 1504733 1.17 1522576 63 17839 1507678 1.17 1525517 64 17663 1500289 1.16 1517952 65 17779 1500547 1.17 1518326 66 17460 1504001 1.15 1521461 67 17818 1499502 1.17 1517320 68 17918 1501913 1.18 1519831 69 17745 1500730 1.17 1518475 70 17324 1498324 1.14 1515648 71 17572 1499342 1.16 1516914 72 17969 1499753 1.18 1517722 73 17821 1494282 1.18 1512103 74 17737 1498850 1.17 1516587 75 18174 1498620 1.20 1516794 76 17789 1491974 1.18 1509763 77 17964 1494672 1.19 1512636 78 17851 1494207 1.18 1512058 79 17827 1489639 1.18 1507466 80 17996 1491962 1.19 1509958 81 17790 1493239 1.18 1511029 82 17678 1485275 1.18 1502953 83 17965 1488355 1.19 1506320 84 17971 1489076 1.19 1507047 85 17704 1481867 1.18 1499571 86 17738 1482764 1.18 1500502 87 17697 1481963 1.18 1499660 88 17725 1475535 1.19 1493260 89 17769 1478563 1.19 1496332 90 17541 1475533 1.17 1493074 91 17916 1467890 1.21 1485806 92 17744 1469224 1.19 1486968 93 17572 1469593 1.18 1487165 94 17545 1462909 1.19 1480454 95 17620 1460720 1.19 1478340 96 17298 1460526 1.17 1477824 97 17549 1456751 1.19 1474300 98 17560 1454727 1.19 1472287 99 17592 1451295 1.20 1468887 100 17534 1443850 1.20 1461384 101 17382 1445430 1.19 1462812 102 17459 1441715 1.20 1459174 103 17364 1435794 1.19 1453158 104 17600 1436022 1.21 1453622 105 17215 1429547 1.19 1446762 106 17375 1425226 1.20 1442601 107 17285 1424473 1.20 1441758 108 17185 1421059 1.19 1438244 109 17281 1413435 1.21 1430716 110 17196 1412389 1.20 1429585 111 16693 1409796 1.17 1426489 112 17186 1404259 1.21 1421445 113 16943 1401173 1.19 1418116 114 16592 1395402 1.18 1411994 115 16838 1387233 1.20 1404071 116 16680 1390386 1.19 1407066 117 16541 1384560 1.18 1401101 118 16736 1376065 1.20 1392801 119 16545 1373172 1.19 1389717 120 16474 1369110 1.19 1385584 121 16439 1362363 1.19 1378802 122 16345 1360997 1.19 1377342 123 16400 1356275 1.19 1372675 124 16372 1348248 1.20 1364620 125 15996 1344200 1.18 1360196 126 16088 1336746 1.19 1352834 127 16243 1333266 1.20 1349509 128 16143 1326376 1.20 1342519 129 15902 1322912 1.19 1338814 130 15715 1313486 1.18 1329201 131 15718 1309504 1.19 1325222 132 15908 1303583 1.21 1319491 133 15664 1294760 1.20 1310424 134 15528 1292805 1.19 1308333 135 15551 1287833 1.19 1303384 136 15713 1278084 1.21 1293797 137 15609 1274210 1.21 1289819 138 15431 1267013 1.20 1282444 139 15159 1260765 1.19 1275924 140 15206 1252750 1.20 1267956 141 15151 1249180 1.20 1264331 142 15309 1239926 1.22 1255235 143 15141 1236048 1.21 1251189 144 15077 1230361 1.21 1245438 145 15177 1223665 1.23 1238842 146 15523 1220558 1.26 1236081 147 16353 1214126 1.33 1230479 148 16795 1204617 1.38 1221412 149 16159 1198653 1.33 1214812 150 15325 1185670 1.28 1200995 151 14545 1112108 1.29 1126653 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 39087 5463176 0.71 5502263 2 50702 6173107 0.81 6223809 3 57142 6637915 0.85 6695057 4 46977 6161961 0.76 6208938 5 45424 6140707 0.73 6186131 6 45414 6298934 0.72 6344348 7 46272 6291893 0.73 6338165 8 47629 6461727 0.73 6509356 9 48941 6477358 0.75 6526299 10 48300 6413594 0.75 6461894 11 49608 6458619 0.76 6508227 12 48775 6371009 0.76 6419784 13 49845 6340780 0.78 6390625 14 49326 6375744 0.77 6425070 15 49765 6360736 0.78 6410501 16 50893 6368481 0.79 6419374 17 50887 6350789 0.79 6401676 18 50794 6372837 0.79 6423631 19 51170 6367886 0.80 6419056 20 51920 6378539 0.81 6430459 21 52147 6381586 0.81 6433733 22 52186 6368518 0.81 6420704 23 52733 6382045 0.82 6434778 24 52632 6382487 0.82 6435119 25 53663 6366870 0.84 6420533 26 53847 6372199 0.84 6426046 27 54203 6383680 0.84 6437883 28 54352 6373276 0.85 6427628 29 54469 6393328 0.84 6447797 30 54595 6393728 0.85 6448323 31 55108 6386985 0.86 6442093 32 55586 6394827 0.86 6450413 33 55132 6393219 0.85 6448351 34 55720 6382580 0.87 6438300 35 55681 6393953 0.86 6449634 36 55780 6399045 0.86 6454825 37 56106 6390361 0.87 6446467 38 56099 6405952 0.87 6462051 39 55994 6410242 0.87 6466236 40 55636 6396144 0.86 6451780 41 56352 6403103 0.87 6459455 42 55800 6402138 0.86 6457938 43 56109 6397099 0.87 6453208 44 56415 6406295 0.87 6462710 45 56583 6406817 0.88 6463400 46 56406 6394630 0.87 6451036 47 56025 6400995 0.87 6457020 48 56255 6408589 0.87 6464844 49 56496 6399081 0.88 6455577 50 56790 6407020 0.88 6463810 51 56311 6407221 0.87 6463532 52 56468 6390855 0.88 6447323 53 56412 6399114 0.87 6455526 54 56452 6404333 0.87 6460785 55 56537 6392576 0.88 6449113 56 56773 6401169 0.88 6457942 57 56235 6408308 0.87 6464543 58 56934 6397760 0.88 6454694 59 56686 6401977 0.88 6458663 60 56903 6403527 0.88 6460430 61 56941 6395371 0.88 6452312 62 56738 6397648 0.88 6454386 63 57076 6394015 0.88 6451091 64 56733 6382658 0.88 6439391 65 56808 6389984 0.88 6446792 66 56515 6392109 0.88 6448624 67 57049 6385845 0.89 6442894 68 56750 6397652 0.88 6454402 69 57007 6391189 0.88 6448196 70 56689 6380543 0.88 6437232 71 57174 6388631 0.89 6445805 72 57070 6382801 0.89 6439871 73 57285 6368757 0.89 6426042 74 57149 6372741 0.89 6429890 75 56761 6373119 0.88 6429880 76 57077 6363023 0.89 6420100 77 57280 6362758 0.89 6420038 78 56912 6357640 0.89 6414552 79 57177 6350078 0.89 6407255 80 56726 6349624 0.89 6406350 81 56282 6348703 0.88 6404985 82 56880 6331347 0.89 6388227 83 57052 6331406 0.89 6388458 84 57401 6322557 0.90 6379958 85 56790 6313002 0.89 6369792 86 56415 6312109 0.89 6368524 87 57386 6307725 0.90 6365111 88 56808 6296292 0.89 6353100 89 57216 6298687 0.90 6355903 90 56115 6290962 0.88 6347077 91 55744 6278950 0.88 6334694 92 56498 6271191 0.89 6327689 93 56322 6259672 0.89 6315994 94 56315 6245794 0.89 6302109 95 56302 6242725 0.89 6299027 96 55963 6227201 0.89 6283164 97 56206 6215784 0.90 6271990 98 56074 6206007 0.90 6262081 99 55788 6200816 0.89 6256604 100 55593 6181739 0.89 6237332 101 55710 6174537 0.89 6230247 102 56047 6164793 0.90 6220840 103 55309 6143058 0.89 6198367 104 55673 6137343 0.90 6193016 105 55312 6119892 0.90 6175204 106 55272 6099356 0.90 6154628 107 55173 6094548 0.90 6149721 108 55163 6078568 0.90 6133731 109 54793 6057673 0.90 6112466 110 54405 6047184 0.89 6101589 111 54990 6029239 0.90 6084229 112 54922 6006190 0.91 6061112 113 54934 5990158 0.91 6045092 114 54424 5978077 0.90 6032501 115 54398 5955280 0.91 6009678 116 54419 5944701 0.91 5999120 117 54185 5922640 0.91 5976825 118 54256 5893651 0.91 5947907 119 53661 5880726 0.90 5934387 120 53067 5858529 0.90 5911596 121 53135 5834928 0.90 5888063 122 52926 5820342 0.90 5873268 123 52730 5800811 0.90 5853541 124 52320 5764157 0.90 5816477 125 52618 5751015 0.91 5803633 126 52446 5724813 0.91 5777259 127 52026 5702812 0.90 5754838 128 51812 5686300 0.90 5738112 129 52116 5664676 0.91 5716792 130 51323 5635710 0.90 5687033 131 51329 5612634 0.91 5663963 132 50987 5589045 0.90 5640032 133 50875 5555053 0.91 5605928 134 50302 5534485 0.90 5584787 135 50787 5506652 0.91 5557439 136 50176 5482489 0.91 5532665 137 50158 5463398 0.91 5513556 138 49957 5438658 0.91 5488615 139 49509 5409624 0.91 5459133 140 49439 5386878 0.91 5436317 141 49673 5353359 0.92 5403032 142 49268 5318804 0.92 5368072 143 49523 5299822 0.93 5349345 144 49519 5272714 0.93 5322233 145 50031 5246822 0.94 5296853 146 50655 5231089 0.96 5281744 147 52327 5219492 0.99 5271819 148 53359 5197839 1.02 5251198 149 52533 5157826 1.01 5210359 150 50600 5096648 0.98 5147248 151 46746 4833920 0.96 4880666 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 10661 976745 1.08 987406 2 35010 801557 4.18 836567 3 54939 630526 8.01 685465 4 75742 783065 8.82 858807 5 74986 782995 8.74 857981 6 73050 759629 8.77 832679 7 76067 768052 9.01 844119 8 75234 734282 9.29 809516 9 80453 761872 9.55 842325 10 82143 739971 9.99 822114 11 82399 746903 9.94 829302 12 84878 743673 10.24 828551 13 82877 711469 10.43 794346 14 82918 716675 10.37 799593 15 82906 706019 10.51 788925 16 83273 697774 10.66 781047 17 84310 696933 10.79 781243 18 83704 691437 10.80 775141 19 84534 687367 10.95 771901 20 83785 682282 10.94 766067 21 83787 680679 10.96 764466 22 83698 676543 11.01 760241 23 83021 667510 11.06 750531 24 83933 664283 11.22 748216 25 82801 660045 11.15 742846 26 82986 656809 11.22 739795 27 82519 651105 11.25 733624 28 82838 649198 11.32 732036 29 81715 641009 11.31 722724 30 81603 639999 11.31 721602 31 81418 634319 11.38 715737 32 81515 630962 11.44 712477 33 80895 625022 11.46 705917 34 81244 620238 11.58 701482 35 81036 616065 11.62 697101 36 80558 612740 11.62 693298 37 80109 608616 11.63 688725 38 80137 605255 11.69 685392 39 78789 598410 11.63 677199 40 78382 595556 11.63 673938 41 78193 590431 11.69 668624 42 77956 586074 11.74 664030 43 77633 583449 11.74 661082 44 77432 580645 11.77 658077 45 76237 572250 11.76 648487 46 76485 569352 11.84 645837 47 76267 565347 11.89 641614 48 75417 561938 11.83 637355 49 75102 558185 11.86 633287 50 74654 552863 11.90 627517 51 74084 548255 11.90 622339 52 73886 542347 11.99 616233 53 73553 539769 11.99 613322 54 73599 534503 12.10 608102 55 71855 530196 11.94 602051 56 71690 526512 11.98 598202 57 71240 522148 12.01 593388 58 70812 518610 12.01 589422 59 70360 513544 12.05 583904 60 69860 510398 12.04 580258 61 69438 505793 12.07 575231 62 69137 501161 12.12 570298 63 68987 497759 12.17 566746 64 67765 493893 12.07 561658 65 67429 488830 12.12 556259 66 67328 485413 12.18 552741 67 66914 481922 12.19 548836 68 66333 476723 12.21 543056 69 65935 472780 12.24 538715 70 65017 468991 12.18 534008 71 64795 464939 12.23 529734 72 64337 460430 12.26 524767 73 63843 457030 12.26 520873 74 63375 454003 12.25 517378 75 63640 448269 12.43 511909 76 62656 445829 12.32 508485 77 62236 441786 12.35 504022 78 61909 438709 12.37 500618 79 61217 433785 12.37 495002 80 60706 429124 12.39 489830 81 60496 426553 12.42 487049 82 59552 421749 12.37 481301 83 59060 418305 12.37 477365 84 59295 413723 12.54 473018 85 58659 411945 12.46 470604 86 57805 406633 12.45 464438 87 57843 402837 12.56 460680 88 57025 400795 12.46 457820 89 56813 397694 12.50 454507 90 55736 392613 12.43 448349 91 55737 388811 12.54 444548 92 55069 386718 12.47 441787 93 54899 382175 12.56 437074 94 54176 379087 12.50 433263 95 54041 377078 12.54 431119 96 53562 371424 12.60 424986 97 52931 368964 12.55 421895 98 52259 367199 12.46 419458 99 52050 361932 12.57 413982 100 51733 359031 12.59 410764 101 50998 355394 12.55 406392 102 50452 352048 12.53 402500 103 50056 348499 12.56 398555 104 49720 343788 12.64 393508 105 49508 342077 12.64 391585 106 48718 338812 12.57 387530 107 48494 335194 12.64 383688 108 47576 331459 12.55 379035 109 47599 329886 12.61 377485 110 46918 326610 12.56 373528 111 46661 322476 12.64 369137 112 46157 319259 12.63 365416 113 46081 317099 12.69 363180 114 45487 314226 12.65 359713 115 44860 310580 12.62 355440 116 44514 307238 12.65 351752 117 44417 305116 12.71 349533 118 43677 302993 12.60 346670 119 43518 299761 12.68 343279 120 42862 296072 12.65 338934 121 42353 293110 12.63 335463 122 42384 289630 12.77 332014 123 41540 286390 12.67 327930 124 41354 284510 12.69 325864 125 41002 280635 12.75 321637 126 40577 279094 12.69 319671 127 39939 275456 12.66 315395 128 39747 272855 12.71 312602 129 39293 269768 12.71 309061 130 39062 266841 12.77 305903 131 38574 264810 12.71 303384 132 38118 262185 12.69 300303 133 37506 259391 12.63 296897 134 37086 255235 12.69 292321 135 37473 253212 12.89 290685 136 36515 251579 12.67 288094 137 36358 249498 12.72 285856 138 36127 246261 12.79 282388 139 35618 244268 12.73 279886 140 35130 241308 12.71 276438 141 35134 236653 12.93 271787 142 34585 234630 12.85 269215 143 34522 233088 12.90 267610 144 33602 229475 12.77 263077 145 33264 226397 12.81 259661 146 32545 223670 12.70 256215 147 32588 220779 12.86 253367 148 31875 218195 12.75 250070 149 31687 211935 13.01 243622 150 31183 187195 14.28 218378 151 26060 0 100.00 26060 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 11850 1368120 0.86 1379970 2 11848 1299893 0.90 1311741 3 18327 1183987 1.52 1202314 4 33855 1037221 3.16 1071076 5 16610 1276090 1.28 1292700 6 12296 1195300 1.02 1207596 7 11668 1141599 1.01 1153267 8 12754 1135830 1.11 1148584 9 12544 1138097 1.09 1150641 10 12170 1114171 1.08 1126341 11 11581 1131567 1.01 1143148 12 11240 1117386 1.00 1128626 13 11110 1099979 1.00 1111089 14 11135 1090767 1.01 1101902 15 11139 1074157 1.03 1085296 16 10876 1069084 1.01 1079960 17 10748 1066614 1.00 1077362 18 11312 1061908 1.05 1073220 19 10959 1049197 1.03 1060156 20 10926 1046569 1.03 1057495 21 10750 1037728 1.03 1048478 22 10757 1030745 1.03 1041502 23 10847 1025245 1.05 1036092 24 10434 1019955 1.01 1030389 25 10652 1015858 1.04 1026510 26 10447 1010682 1.02 1021129 27 10422 1000276 1.03 1010698 28 10351 995577 1.03 1005928 29 10360 990759 1.03 1001119 30 10223 979928 1.03 990151 31 10241 975272 1.04 985513 32 10484 969854 1.07 980338 33 10156 961058 1.05 971214 34 10189 954558 1.06 964747 35 10190 948861 1.06 959051 36 10099 941992 1.06 952091 37 10108 939314 1.06 949422 38 10217 932511 1.08 942728 39 10072 925204 1.08 935276 40 9796 916365 1.06 926161 41 9955 913488 1.08 923443 42 9850 902960 1.08 912810 43 9943 897854 1.10 907797 44 9867 889670 1.10 899537 45 9744 887286 1.09 897030 46 9854 879874 1.11 889728 47 9694 873550 1.10 883244 48 9679 866933 1.10 876612 49 9575 859623 1.10 869198 50 9470 853741 1.10 863211 51 9591 845946 1.12 855537 52 9333 839561 1.10 848894 53 9483 834020 1.12 843503 54 9352 828390 1.12 837742 55 9229 820526 1.11 829755 56 9275 815191 1.12 824466 57 9010 805663 1.11 814673 58 9296 801145 1.15 810441 59 8975 795383 1.12 804358 60 9120 786226 1.15 795346 61 8882 780157 1.13 789039 62 8831 777308 1.12 786139 63 8768 770701 1.12 779469 64 8838 764708 1.14 773546 65 8832 759528 1.15 768360 66 8877 751274 1.17 760151 67 8780 746369 1.16 755149 68 8660 739501 1.16 748161 69 8558 734225 1.15 742783 70 8653 727213 1.18 735866 71 8407 721198 1.15 729605 72 8518 715299 1.18 723817 73 8223 711010 1.14 719233 74 8313 705973 1.16 714286 75 8162 698101 1.16 706263 76 8034 693220 1.15 701254 77 8095 687527 1.16 695622 78 8047 680098 1.17 688145 79 8139 674577 1.19 682716 80 7884 668314 1.17 676198 81 7869 662908 1.17 670777 82 7900 658044 1.19 665944 83 7834 650262 1.19 658096 84 7765 644889 1.19 652654 85 7630 639128 1.18 646758 86 7660 635021 1.19 642681 87 7623 629556 1.20 637179 88 7409 623527 1.17 630936 89 7360 619687 1.17 627047 90 7418 612677 1.20 620095 91 7230 606906 1.18 614136 92 7284 601422 1.20 608706 93 7146 595753 1.19 602899 94 7147 589000 1.20 596147 95 6974 584353 1.18 591327 96 7092 579969 1.21 587061 97 6840 574679 1.18 581519 98 6841 570486 1.18 577327 99 6900 562721 1.21 569621 100 6803 558184 1.20 564987 101 6632 553870 1.18 560502 102 6660 547414 1.20 554074 103 6454 542230 1.18 548684 104 6542 537113 1.20 543655 105 6517 532251 1.21 538768 106 6424 527466 1.20 533890 107 6425 520878 1.22 527303 108 6295 517238 1.20 523533 109 6353 510632 1.23 516985 110 6304 508309 1.22 514613 111 6170 502854 1.21 509024 112 6030 497655 1.20 503685 113 6012 493105 1.20 499117 114 5972 487983 1.21 493955 115 5886 483272 1.20 489158 116 5984 477846 1.24 483830 117 5750 474064 1.20 479814 118 5936 469665 1.25 475601 119 5880 465330 1.25 471210 120 5618 461222 1.20 466840 121 5637 456323 1.22 461960 122 5597 451227 1.23 456824 123 5612 446063 1.24 451675 124 5408 443005 1.21 448413 125 5429 438679 1.22 444108 126 5525 433473 1.26 438998 127 5497 427466 1.27 432963 128 5386 422399 1.26 427785 129 5318 417933 1.26 423251 130 5380 414732 1.28 420112 131 5203 412261 1.25 417464 132 5202 405798 1.27 411000 133 5056 401404 1.24 406460 134 5058 396668 1.26 401726 135 5010 392541 1.26 397551 136 4963 389546 1.26 394509 137 4910 387073 1.25 391983 138 5101 380558 1.32 385659 139 4878 377953 1.27 382831 140 4767 373828 1.26 378595 141 4932 369585 1.32 374517 142 4714 364040 1.28 368754 143 4781 362087 1.30 366868 144 4606 355528 1.28 360134 145 4659 351287 1.31 355946 146 4570 345798 1.30 350368 147 4541 340637 1.32 345178 148 4390 337360 1.28 341750 149 4468 328026 1.34 332494 150 4069 299559 1.34 303628 151 2808 0 100.00 2808 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 38825 5153793 0.75 5192618 2 40775 5105525 0.79 5146300 3 38264 4694889 0.81 4733153 4 42119 4948619 0.84 4990738 5 38748 5079840 0.76 5118588 6 36443 5106807 0.71 5143250 7 36763 5067599 0.72 5104362 8 36612 4916193 0.74 4952805 9 36657 4949335 0.74 4985992 10 36218 4771539 0.75 4807757 11 36563 4796263 0.76 4832826 12 36230 4718639 0.76 4754869 13 35665 4636523 0.76 4672188 14 36201 4645292 0.77 4681493 15 36127 4595219 0.78 4631346 16 35838 4543674 0.78 4579512 17 36148 4549421 0.79 4585569 18 36188 4522482 0.79 4558670 19 35955 4504905 0.79 4540860 20 36282 4478555 0.80 4514837 21 35967 4447280 0.80 4483247 22 36624 4410347 0.82 4446971 23 35790 4384556 0.81 4420346 24 36030 4347700 0.82 4383730 25 35841 4324266 0.82 4360107 26 35793 4303463 0.82 4339256 27 36074 4279211 0.84 4315285 28 35960 4247906 0.84 4283866 29 35986 4226284 0.84 4262270 30 35989 4196112 0.85 4232101 31 36053 4167337 0.86 4203390 32 35422 4139328 0.85 4174750 33 35348 4107057 0.85 4142405 34 35104 4071538 0.85 4106642 35 35489 4052824 0.87 4088313 36 34948 4020469 0.86 4055417 37 35056 3995757 0.87 4030813 38 35058 3975236 0.87 4010294 39 34425 3942509 0.87 3976934 40 34509 3913302 0.87 3947811 41 34460 3890404 0.88 3924864 42 34343 3856771 0.88 3891114 43 34171 3822158 0.89 3856329 44 34111 3802473 0.89 3836584 45 33547 3769638 0.88 3803185 46 33767 3747271 0.89 3781038 47 33596 3726754 0.89 3760350 48 33466 3694226 0.90 3727692 49 32955 3663097 0.89 3696052 50 33294 3643480 0.91 3676774 51 32738 3604006 0.90 3636744 52 32575 3581052 0.90 3613627 53 32461 3556223 0.90 3588684 54 32276 3528583 0.91 3560859 55 31831 3500914 0.90 3532745 56 31612 3482917 0.90 3514529 57 31560 3445934 0.91 3477494 58 31262 3427857 0.90 3459119 59 30814 3400833 0.90 3431647 60 30799 3368010 0.91 3398809 61 30836 3337282 0.92 3368118 62 30319 3312597 0.91 3342916 63 30087 3285634 0.91 3315721 64 29784 3256862 0.91 3286646 65 29501 3238333 0.90 3267834 66 29110 3210786 0.90 3239896 67 29177 3188366 0.91 3217543 68 29002 3164314 0.91 3193316 69 28722 3135087 0.91 3163809 70 28462 3105738 0.91 3134200 71 28389 3082285 0.91 3110674 72 28139 3055816 0.91 3083955 73 28128 3026195 0.92 3054323 74 27648 3009916 0.91 3037564 75 27216 2981936 0.90 3009152 76 27402 2958031 0.92 2985433 77 26944 2934239 0.91 2961183 78 26771 2912080 0.91 2938851 79 26713 2883218 0.92 2909931 80 26618 2864917 0.92 2891535 81 26053 2836081 0.91 2862134 82 26037 2811791 0.92 2837828 83 25665 2793012 0.91 2818677 84 25249 2767184 0.90 2792433 85 25646 2742335 0.93 2767981 86 25225 2722808 0.92 2748033 87 24928 2697179 0.92 2722107 88 24750 2673526 0.92 2698276 89 24433 2652019 0.91 2676452 90 24445 2625873 0.92 2650318 91 24128 2599536 0.92 2623664 92 24124 2581286 0.93 2605410 93 23635 2557045 0.92 2580680 94 23436 2532861 0.92 2556297 95 23386 2508770 0.92 2532156 96 23101 2490060 0.92 2513161 97 23085 2469868 0.93 2492953 98 22731 2447227 0.92 2469958 99 22413 2425068 0.92 2447481 100 22124 2401340 0.91 2423464 101 22231 2381573 0.92 2403804 102 21943 2356096 0.92 2378039 103 21765 2336310 0.92 2358075 104 21516 2316569 0.92 2338085 105 21265 2293557 0.92 2314822 106 20888 2272417 0.91 2293305 107 21001 2254962 0.92 2275963 108 20831 2231807 0.92 2252638 109 20536 2208915 0.92 2229451 110 20462 2188278 0.93 2208740 111 20322 2170628 0.93 2190950 112 20374 2147130 0.94 2167504 113 19774 2126315 0.92 2146089 114 19581 2107431 0.92 2127012 115 19504 2088386 0.93 2107890 116 19394 2072283 0.93 2091677 117 19177 2052297 0.93 2071474 118 18874 2030620 0.92 2049494 119 18616 2011208 0.92 2029824 120 18695 1992854 0.93 2011549 121 18642 1968126 0.94 1986768 122 18469 1949836 0.94 1968305 123 18119 1929872 0.93 1947991 124 18146 1913579 0.94 1931725 125 17820 1895562 0.93 1913382 126 17722 1875740 0.94 1893462 127 17472 1852225 0.93 1869697 128 17767 1837678 0.96 1855445 129 17411 1815742 0.95 1833153 130 17282 1799383 0.95 1816665 131 17227 1781536 0.96 1798763 132 17103 1761723 0.96 1778826 133 16698 1740242 0.95 1756940 134 16729 1727281 0.96 1744010 135 16787 1710008 0.97 1726795 136 16248 1694129 0.95 1710377 137 16172 1677716 0.95 1693888 138 16240 1655196 0.97 1671436 139 15770 1639520 0.95 1655290 140 15742 1622417 0.96 1638159 141 15552 1600946 0.96 1616498 142 15450 1582642 0.97 1598092 143 15176 1568195 0.96 1583371 144 15193 1550696 0.97 1565889 145 15110 1530724 0.98 1545834 146 15182 1509611 1.00 1524793 147 14947 1491688 0.99 1506635 148 14552 1470343 0.98 1484895 149 14232 1439509 0.98 1453741 150 13410 1306467 1.02 1319877 151 9348 0 100.00 9348