CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 162212 382282 29.79 544494 2 116698 443420 20.83 560118 3 181220 665251 21.41 846471 4 171047 605512 22.03 776559 5 166059 575545 22.39 741604 6 160226 581362 21.61 741588 7 189900 583293 24.56 773193 8 195549 699025 21.86 894574 9 166510 598584 21.76 765094 10 177570 656550 21.29 834120 11 206177 694481 22.89 900658 12 177880 609570 22.59 787450 13 176217 622392 22.07 798609 14 170663 599474 22.16 770137 15 176377 584526 23.18 760903 16 188173 618980 23.31 807153 17 181492 598850 23.26 780342 18 187077 611556 23.42 798633 19 187652 623150 23.14 810802 20 188979 621999 23.30 810978 21 194131 640882 23.25 835013 22 189957 623774 23.34 813731 23 195598 636251 23.51 831849 24 196336 626648 23.86 822984 25 197096 618859 24.16 815955 26 195510 621063 23.94 816573 27 201561 636463 24.05 838024 28 197685 635919 23.71 833604 29 198104 639933 23.64 838037 30 205892 661631 23.73 867523 31 205771 664172 23.65 869943 32 205912 660508 23.77 866420 33 210570 666790 24.00 877360 34 212660 661291 24.33 873951 35 210257 658325 24.21 868582 36 217608 673617 24.42 891225 37 211855 674334 23.91 886189 38 215739 673758 24.25 889497 39 214293 686263 23.80 900556 40 216861 675282 24.31 892143 41 214192 682074 23.90 896266 42 221216 698561 24.05 919777 43 220216 697816 23.99 918032 44 226108 702811 24.34 928919 45 226481 708233 24.23 934714 46 229262 704361 24.56 933623 47 226937 703797 24.38 930734 48 226543 713232 24.11 939775 49 226244 711326 24.13 937570 50 227524 709851 24.27 937375 51 231812 721007 24.33 952819 52 229909 719186 24.22 949095 53 232657 728287 24.21 960944 54 237669 732975 24.49 970644 55 236358 731743 24.41 968101 56 237138 732372 24.46 969510 57 239597 741852 24.41 981449 58 237954 737431 24.40 975385 59 237196 735661 24.38 972857 60 243803 749155 24.55 992958 61 239795 737112 24.55 976907 62 238161 735999 24.45 974160 63 242923 750173 24.46 993096 64 247375 752673 24.74 1000048 65 244179 753399 24.48 997578 66 246984 759810 24.53 1006794 67 247539 751847 24.77 999386 68 246916 755011 24.64 1001927 69 247816 761082 24.56 1008898 70 246979 758697 24.56 1005676 71 247209 757432 24.61 1004641 72 249131 767889 24.50 1017020 73 246585 760527 24.48 1007112 74 246986 762264 24.47 1009250 75 249624 766222 24.57 1015846 76 251137 760205 24.83 1011342 77 249479 762518 24.65 1011997 78 251103 774556 24.48 1025659 79 250543 772015 24.50 1022558 80 250404 773139 24.46 1023543 81 252594 775658 24.57 1028252 82 248978 764893 24.56 1013871 83 248382 766558 24.47 1014940 84 249507 775438 24.34 1024945 85 248369 768191 24.43 1016560 86 249209 766232 24.54 1015441 87 249626 770443 24.47 1020069 88 248806 765103 24.54 1013909 89 245092 762890 24.32 1007982 90 247651 772724 24.27 1020375 91 246042 762959 24.38 1009001 92 244647 755146 24.47 999793 93 244950 764950 24.25 1009900 94 245900 764615 24.33 1010515 95 243626 760395 24.27 1004021 96 243458 758285 24.30 1001743 97 240450 750534 24.26 990984 98 240201 745967 24.36 986168 99 239547 753642 24.12 993189 100 237605 746247 24.15 983852 101 235948 741727 24.13 977675 102 236579 744145 24.12 980724 103 235680 739583 24.17 975263 104 235133 739832 24.12 974965 105 232824 741133 23.90 973957 106 229765 726716 24.02 956481 107 227906 723042 23.97 950948 108 230042 727854 24.02 957896 109 225235 720751 23.81 945986 110 222986 713431 23.81 936417 111 223867 717842 23.77 941709 112 222305 708816 23.87 931121 113 219740 708256 23.68 927996 114 221189 710902 23.73 932091 115 217882 708975 23.51 926857 116 217559 706098 23.55 923657 117 216092 704702 23.47 920794 118 213568 695466 23.49 909034 119 210224 687277 23.42 897501 120 209650 688580 23.34 898230 121 208170 682599 23.37 890769 122 206173 672126 23.47 878299 123 205905 678006 23.29 883911 124 203790 674613 23.20 878403 125 202636 672513 23.15 875149 126 199374 673678 22.84 873052 127 197903 669567 22.81 867470 128 196822 665500 22.82 862322 129 194193 665415 22.59 859608 130 191459 651814 22.70 843273 131 188972 643655 22.70 832627 132 188427 639524 22.76 827951 133 184505 629792 22.66 814297 134 184762 629097 22.70 813859 135 182817 632949 22.41 815766 136 181681 633167 22.30 814848 137 179285 627822 22.21 807107 138 177539 628432 22.03 805971 139 176407 617936 22.21 794343 140 172158 611700 21.96 783858 141 171593 607491 22.02 779084 142 168941 591337 22.22 760278 143 164227 582786 21.98 747013 144 164308 584051 21.96 748359 145 162086 578702 21.88 740788 146 160251 580057 21.65 740308 147 160070 588486 21.38 748556 148 158599 580354 21.46 738953 149 155395 574330 21.30 729725 150 151468 570044 20.99 721512 151 141888 516661 21.55 658549 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 26215 679253 3.72 705468 2 26445 830995 3.08 857440 3 37437 1168199 3.11 1205636 4 33530 1029582 3.15 1063112 5 27044 894489 2.93 921533 6 29417 970405 2.94 999822 7 35648 1087900 3.17 1123548 8 31856 987794 3.12 1019650 9 31232 1004176 3.02 1035408 10 32518 1049213 3.01 1081731 11 34940 1048555 3.22 1083495 12 36308 1060845 3.31 1097153 13 33774 992672 3.29 1026446 14 31983 974967 3.18 1006950 15 34368 1032377 3.22 1066745 16 35053 1033127 3.28 1068180 17 31761 974796 3.16 1006557 18 32868 983009 3.24 1015877 19 33148 989001 3.24 1022149 20 32962 996602 3.20 1029564 21 33802 1002084 3.26 1035886 22 34041 1018863 3.23 1052904 23 34682 1033598 3.25 1068280 24 36893 1038568 3.43 1075461 25 36025 1052904 3.31 1088929 26 35838 1045118 3.32 1080956 27 35334 1040400 3.28 1075734 28 35180 1035321 3.29 1070501 29 36023 1035209 3.36 1071232 30 34712 1051176 3.20 1085888 31 36548 1069671 3.30 1106219 32 37340 1064453 3.39 1101793 33 36934 1087927 3.28 1124861 34 37885 1106784 3.31 1144669 35 39951 1117236 3.45 1157187 36 39086 1126030 3.35 1165116 37 38808 1108033 3.38 1146841 38 37290 1097620 3.29 1134910 39 36512 1106628 3.19 1143140 40 36905 1118658 3.19 1155563 41 39150 1121832 3.37 1160982 42 38137 1129690 3.27 1167827 43 40696 1139401 3.45 1180097 44 40027 1149027 3.37 1189054 45 41179 1177543 3.38 1218722 46 42409 1171239 3.49 1213648 47 40833 1172682 3.36 1213515 48 38933 1155279 3.26 1194212 49 39979 1157687 3.34 1197666 50 38924 1167519 3.23 1206443 51 41084 1167511 3.40 1208595 52 40489 1172927 3.34 1213416 53 40829 1167207 3.38 1208036 54 43391 1192299 3.51 1235690 55 42745 1207637 3.42 1250382 56 42836 1212715 3.41 1255551 57 44638 1201222 3.58 1245860 58 41793 1201311 3.36 1243104 59 43081 1195041 3.48 1238122 60 41577 1196384 3.36 1237961 61 42414 1207850 3.39 1250264 62 42567 1198371 3.43 1240938 63 43483 1212602 3.46 1256085 64 43729 1211804 3.48 1255533 65 44702 1218990 3.54 1263692 66 43922 1227893 3.45 1271815 67 45578 1237071 3.55 1282649 68 42821 1231154 3.36 1273975 69 42939 1221803 3.40 1264742 70 43861 1225591 3.46 1269452 71 44011 1233806 3.44 1277817 72 43727 1234627 3.42 1278354 73 44020 1232183 3.45 1276203 74 42943 1227552 3.38 1270495 75 45790 1241770 3.56 1287560 76 45506 1256688 3.49 1302194 77 44418 1254587 3.42 1299005 78 42882 1259567 3.29 1302449 79 44479 1249378 3.44 1293857 80 45861 1250814 3.54 1296675 81 43770 1251075 3.38 1294845 82 44377 1246454 3.44 1290831 83 43494 1240669 3.39 1284163 84 44527 1238937 3.47 1283464 85 44754 1243076 3.48 1287830 86 43972 1247179 3.41 1291151 87 44021 1251789 3.40 1295810 88 45183 1240950 3.51 1286133 89 44898 1243813 3.48 1288711 90 43326 1245099 3.36 1288425 91 43606 1243476 3.39 1287082 92 44719 1237739 3.49 1282458 93 43746 1234791 3.42 1278537 94 43685 1229538 3.43 1273223 95 44122 1212264 3.51 1256386 96 43306 1209982 3.46 1253288 97 44772 1215400 3.55 1260172 98 43822 1210642 3.49 1254464 99 43666 1213986 3.47 1257652 100 43708 1210400 3.49 1254108 101 43181 1210152 3.45 1253333 102 43156 1205980 3.45 1249136 103 43082 1201377 3.46 1244459 104 44362 1187567 3.60 1231929 105 42897 1182300 3.50 1225197 106 43439 1172949 3.57 1216388 107 42356 1169932 3.49 1212288 108 43393 1174088 3.56 1217481 109 43104 1169470 3.55 1212574 110 42616 1173848 3.50 1216464 111 42087 1172038 3.47 1214125 112 42507 1177245 3.48 1219752 113 42194 1163849 3.50 1206043 114 40101 1150712 3.37 1190813 115 41191 1142217 3.48 1183408 116 40335 1129475 3.45 1169810 117 41006 1132303 3.49 1173309 118 39966 1128959 3.42 1168925 119 40911 1119421 3.53 1160332 120 40163 1123650 3.45 1163813 121 39927 1123510 3.43 1163437 122 40503 1127267 3.47 1167770 123 39013 1117013 3.37 1156026 124 38887 1106523 3.40 1145410 125 38459 1091029 3.40 1129488 126 38242 1076598 3.43 1114840 127 38931 1072978 3.50 1111909 128 38857 1062512 3.53 1101369 129 37728 1059303 3.44 1097031 130 37454 1055849 3.43 1093303 131 37465 1053177 3.44 1090642 132 37612 1058642 3.43 1096254 133 36780 1045805 3.40 1082585 134 35830 1025549 3.38 1061379 135 36097 1016907 3.43 1053004 136 35827 1007801 3.43 1043628 137 35331 999424 3.41 1034755 138 36130 992545 3.51 1028675 139 35127 981772 3.45 1016899 140 35223 976058 3.48 1011281 141 35321 970935 3.51 1006256 142 34747 965993 3.47 1000740 143 34397 956223 3.47 990620 144 33964 944677 3.47 978641 145 33684 940373 3.46 974057 146 34595 935626 3.57 970221 147 34402 929735 3.57 964137 148 34421 919442 3.61 953863 149 33896 909321 3.59 943217 150 32874 896489 3.54 929363 151 32528 835909 3.75 868437 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 95893 2829470 3.28 2925363 2 84874 3212015 2.57 3296889 3 112164 4053021 2.69 4165185 4 87606 3382042 2.52 3469648 5 84159 3211905 2.55 3296064 6 86859 3435339 2.47 3522198 7 92732 3598731 2.51 3691463 8 104073 3953101 2.57 4057174 9 101738 3917995 2.53 4019733 10 100372 3827135 2.56 3927507 11 110122 4161776 2.58 4271898 12 104775 3923915 2.60 4028690 13 99440 3735525 2.59 3834965 14 96480 3769494 2.50 3865974 15 96254 3761758 2.49 3858012 16 96116 3760047 2.49 3856163 17 91170 3564459 2.49 3655629 18 89700 3614239 2.42 3703939 19 90616 3663540 2.41 3754156 20 90217 3714777 2.37 3804994 21 96776 3786080 2.49 3882856 22 92732 3810602 2.38 3903334 23 95189 3803359 2.44 3898548 24 90496 3796154 2.33 3886650 25 94678 3767354 2.45 3862032 26 86927 3704762 2.29 3791689 27 91662 3725562 2.40 3817224 28 87264 3731176 2.29 3818440 29 90860 3766039 2.36 3856899 30 88432 3843036 2.25 3931468 31 95725 3875763 2.41 3971488 32 94218 3888872 2.37 3983090 33 97332 3941489 2.41 4038821 34 96596 3911555 2.41 4008151 35 90946 3873158 2.29 3964104 36 91945 3880476 2.31 3972421 37 92631 3865264 2.34 3957895 38 89923 3854220 2.28 3944143 39 92727 3922809 2.31 4015536 40 94226 3927002 2.34 4021228 41 94167 3937619 2.34 4031786 42 96369 3972950 2.37 4069319 43 96017 3962816 2.37 4058833 44 96126 3974317 2.36 4070443 45 94709 4000140 2.31 4094849 46 95955 3963798 2.36 4059753 47 93046 3944505 2.30 4037551 48 92848 3956813 2.29 4049661 49 92583 3948103 2.29 4040686 50 96325 3973625 2.37 4069950 51 93809 3998378 2.29 4092187 52 97066 3968553 2.39 4065619 53 94546 3978373 2.32 4072919 54 96979 4013758 2.36 4110737 55 96528 4024868 2.34 4121396 56 97619 4027948 2.37 4125567 57 94124 4042067 2.28 4136191 58 94991 4032841 2.30 4127832 59 94132 4003519 2.30 4097651 60 97160 4053454 2.34 4150614 61 95985 4033952 2.32 4129937 62 97166 4032335 2.35 4129501 63 98203 4031557 2.38 4129760 64 98544 4027298 2.39 4125842 65 96841 4032533 2.35 4129374 66 98390 4080797 2.35 4179187 67 96496 4091020 2.30 4187516 68 97304 4082314 2.33 4179618 69 99421 4104454 2.36 4203875 70 98101 4081011 2.35 4179112 71 100996 4109239 2.40 4210235 72 98801 4116635 2.34 4215436 73 100574 4078757 2.41 4179331 74 99009 4056623 2.38 4155632 75 100120 4091436 2.39 4191556 76 97408 4083515 2.33 4180923 77 98922 4090208 2.36 4189130 78 97245 4092797 2.32 4190042 79 98532 4071906 2.36 4170438 80 97511 4060779 2.34 4158290 81 98599 4096164 2.35 4194763 82 99426 4099221 2.37 4198647 83 99135 4054500 2.39 4153635 84 99985 4070119 2.40 4170104 85 97549 4043400 2.36 4140949 86 97923 4049437 2.36 4147360 87 96681 4066407 2.32 4163088 88 97344 4042479 2.35 4139823 89 96938 4012314 2.36 4109252 90 97612 4041093 2.36 4138705 91 96877 4054011 2.33 4150888 92 98007 4030997 2.37 4129004 93 100735 4047616 2.43 4148351 94 98609 4026611 2.39 4125220 95 97822 3995280 2.39 4093102 96 98030 4005395 2.39 4103425 97 97858 3997746 2.39 4095604 98 97993 3991911 2.40 4089904 99 96710 3993038 2.36 4089748 100 96341 3974929 2.37 4071270 101 96167 3959374 2.37 4055541 102 98221 4002112 2.40 4100333 103 96672 3965388 2.38 4062060 104 96510 3963523 2.38 4060033 105 95883 3951234 2.37 4047117 106 97509 3932893 2.42 4030402 107 96809 3923982 2.41 4020791 108 97531 3935512 2.42 4033043 109 97333 3911498 2.43 4008831 110 96052 3874518 2.42 3970570 111 98172 3869498 2.47 3967670 112 98350 3856159 2.49 3954509 113 97730 3814657 2.50 3912387 114 97156 3813615 2.48 3910771 115 96290 3805155 2.47 3901445 116 97564 3797804 2.50 3895368 117 98445 3817028 2.51 3915473 118 98818 3816076 2.52 3914894 119 95366 3788741 2.46 3884107 120 96876 3773496 2.50 3870372 121 96796 3735155 2.53 3831951 122 96099 3695304 2.53 3791403 123 94870 3672662 2.52 3767532 124 94145 3628405 2.53 3722550 125 92307 3593442 2.50 3685749 126 95186 3619892 2.56 3715078 127 95155 3628488 2.56 3723643 128 94309 3630440 2.53 3724749 129 92491 3631422 2.48 3723913 130 92398 3599692 2.50 3692090 131 93122 3558399 2.55 3651521 132 92594 3534787 2.55 3627381 133 90171 3473812 2.53 3563983 134 89112 3423260 2.54 3512372 135 89082 3405811 2.55 3494893 136 88490 3402179 2.54 3490669 137 89992 3404108 2.58 3494100 138 88868 3433013 2.52 3521881 139 88922 3407396 2.54 3496318 140 87188 3383413 2.51 3470601 141 87824 3349276 2.56 3437100 142 86568 3299300 2.56 3385868 143 84913 3240304 2.55 3325217 144 84679 3211753 2.57 3296432 145 84237 3177343 2.58 3261580 146 84219 3175197 2.58 3259416 147 85809 3202181 2.61 3287990 148 86596 3212551 2.62 3299147 149 85997 3182410 2.63 3268407 150 84259 3149995 2.61 3234254 151 81127 2957026 2.67 3038153 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 24230 816866 2.88 841096 2 41117 609864 6.32 650981 3 34177 372022 8.41 406199 4 60656 528513 10.30 589169 5 53804 524663 9.30 578467 6 55866 483509 10.36 539375 7 53973 473828 10.23 527801 8 63042 487313 11.45 550355 9 83776 545550 13.31 629326 10 82607 449634 15.52 532241 11 89839 485058 15.63 574897 12 105880 507255 17.27 613135 13 90638 436044 17.21 526682 14 91841 442209 17.20 534050 15 86970 418785 17.20 505755 16 90374 403766 18.29 494140 17 95559 423134 18.42 518693 18 91562 403927 18.48 495489 19 94691 402954 19.03 497645 20 94082 406369 18.80 500451 21 93529 398718 19.00 492247 22 95859 404248 19.17 500107 23 93386 394011 19.16 487397 24 94766 392624 19.44 487390 25 94249 382685 19.76 476934 26 94902 377109 20.11 472011 27 92106 370800 19.90 462906 28 93857 372689 20.12 466546 29 91650 369853 19.86 461503 30 90645 367067 19.80 457712 31 92221 371901 19.87 464122 32 92337 372949 19.85 465286 33 90795 362430 20.03 453225 34 92077 359354 20.40 451431 35 92302 353739 20.69 446041 36 89460 346631 20.51 436091 37 91844 347685 20.90 439529 38 88652 348367 20.29 437019 39 88098 342070 20.48 430168 40 86793 341130 20.28 427923 41 86996 335367 20.60 422363 42 84736 331113 20.38 415849 43 86425 333120 20.60 419545 44 85849 331023 20.59 416872 45 85973 324987 20.92 410960 46 84370 323566 20.68 407936 47 85304 317303 21.19 402607 48 81568 312636 20.69 394204 49 81395 312310 20.67 393705 50 81067 312115 20.62 393182 51 79831 307003 20.64 386834 52 80201 305763 20.78 385964 53 79428 304378 20.69 383806 54 78390 301044 20.66 379434 55 79412 297688 21.06 377100 56 78918 295125 21.10 374043 57 77577 289823 21.12 367400 58 77730 291573 21.05 369303 59 77093 287938 21.12 365031 60 75993 283689 21.13 359682 61 76168 286137 21.02 362305 62 75828 281970 21.19 357798 63 74059 276062 21.15 350121 64 75093 276696 21.35 351789 65 75153 276647 21.36 351800 66 73519 270785 21.35 344304 67 73340 270548 21.33 343888 68 73532 266207 21.64 339739 69 72712 264164 21.58 336876 70 72066 264325 21.42 336391 71 71026 260330 21.43 331356 72 70405 258086 21.43 328491 73 69951 258657 21.29 328608 74 69678 256656 21.35 326334 75 68698 250824 21.50 319522 76 68853 248664 21.68 317517 77 69468 244785 22.11 314253 78 68331 241563 22.05 309894 79 67930 243424 21.82 311354 80 66879 241641 21.68 308520 81 65693 238967 21.56 304660 82 65877 236537 21.78 302414 83 65056 233824 21.77 298880 84 63848 230885 21.66 294733 85 64118 229431 21.84 293549 86 63944 225455 22.10 289399 87 63282 222373 22.15 285655 88 62663 220597 22.12 283260 89 62459 219331 22.17 281790 90 60882 214946 22.07 275828 91 60770 215569 21.99 276339 92 59501 212427 21.88 271928 93 58838 208372 22.02 267210 94 58362 208008 21.91 266370 95 58400 204284 22.23 262684 96 57420 200519 22.26 257939 97 57407 199638 22.33 257045 98 55774 196931 22.07 252705 99 55816 192430 22.48 248246 100 54345 191615 22.10 245960 101 54586 190622 22.26 245208 102 53258 187375 22.13 240633 103 52554 185805 22.05 238359 104 52501 182583 22.33 235084 105 51269 178932 22.27 230201 106 50742 178349 22.15 229091 107 49723 174660 22.16 224383 108 49106 170282 22.38 219388 109 48552 169635 22.25 218187 110 48120 167287 22.34 215407 111 46945 164139 22.24 211084 112 47003 163518 22.33 210521 113 45882 160750 22.20 206632 114 45686 158394 22.39 204080 115 45023 156797 22.31 201820 116 44082 154491 22.20 198573 117 44039 153065 22.34 197104 118 43549 150370 22.46 193919 119 42561 147230 22.43 189791 120 41880 144848 22.43 186728 121 41632 143274 22.52 184906 122 40891 141270 22.45 182161 123 40348 138064 22.62 178412 124 40138 137620 22.58 177758 125 39287 134853 22.56 174140 126 38758 133064 22.56 171822 127 37817 131201 22.37 169018 128 37627 130215 22.42 167842 129 36793 127644 22.38 164437 130 36342 125872 22.40 162214 131 35744 123169 22.49 158913 132 35149 120337 22.61 155486 133 34562 119424 22.44 153986 134 33995 116361 22.61 150356 135 33358 115055 22.48 148413 136 33206 114918 22.42 148124 137 33169 113589 22.60 146758 138 32112 111189 22.41 143301 139 31717 109985 22.38 141702 140 31634 108204 22.62 139838 141 30389 106027 22.28 136416 142 30411 103746 22.67 134157 143 29775 101889 22.61 131664 144 29349 99319 22.81 128668 145 28448 97919 22.51 126367 146 28018 95798 22.63 123816 147 28001 95505 22.67 123506 148 27506 94768 22.50 122274 149 26690 90694 22.74 117384 150 26307 78956 24.99 105263 151 22949 0 100.00 22949 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 17705 690392 2.50 708097 2 28418 1118776 2.48 1147194 3 25886 761373 3.29 787259 4 28522 583493 4.66 612015 5 28078 860376 3.16 888454 6 23506 801428 2.85 824934 7 20166 666348 2.94 686514 8 21461 696977 2.99 718438 9 23775 777298 2.97 801073 10 22245 693088 3.11 715333 11 19882 681901 2.83 701783 12 21261 718031 2.88 739292 13 21643 711577 2.95 733220 14 21404 703599 2.95 725003 15 21753 656802 3.21 678555 16 19855 632629 3.04 652484 17 20452 655631 3.03 676083 18 22514 665238 3.27 687752 19 19120 618588 3.00 637708 20 19811 611545 3.14 631356 21 19935 615562 3.14 635497 22 18668 606171 2.99 624839 23 19739 604227 3.16 623966 24 18895 604021 3.03 622916 25 19106 605781 3.06 624887 26 20079 605527 3.21 625606 27 19589 608151 3.12 627740 28 19115 593887 3.12 613002 29 19207 584744 3.18 603951 30 18741 575830 3.15 594571 31 18758 571348 3.18 590106 32 17783 567471 3.04 585254 33 18691 573912 3.15 592603 34 17849 557887 3.10 575736 35 17720 564240 3.04 581960 36 18920 570664 3.21 589584 37 18400 564543 3.16 582943 38 19118 563503 3.28 582621 39 18829 553384 3.29 572213 40 17739 536788 3.20 554527 41 17139 537313 3.09 554452 42 17340 532590 3.15 549930 43 18044 523715 3.33 541759 44 17701 524797 3.26 542498 45 17521 523368 3.24 540889 46 18134 518832 3.38 536966 47 17707 523037 3.27 540744 48 18746 517629 3.49 536375 49 17912 511014 3.39 528926 50 16997 499986 3.29 516983 51 16870 492934 3.31 509804 52 16547 490114 3.27 506661 53 17230 482765 3.45 499995 54 16751 478575 3.38 495326 55 16220 473498 3.31 489718 56 17667 477056 3.57 494723 57 17343 477155 3.51 494498 58 16879 475829 3.43 492708 59 17242 465094 3.57 482336 60 17001 461480 3.55 478481 61 16254 453161 3.46 469415 62 16377 448530 3.52 464907 63 15917 448241 3.43 464158 64 16112 440116 3.53 456228 65 15739 440439 3.45 456178 66 16211 438797 3.56 455008 67 15914 435195 3.53 451109 68 16665 436979 3.67 453644 69 15954 434195 3.54 450149 70 15660 424173 3.56 439833 71 15629 418951 3.60 434580 72 15701 416650 3.63 432351 73 15270 410949 3.58 426219 74 14999 408775 3.54 423774 75 14974 405999 3.56 420973 76 14614 399908 3.53 414522 77 15123 402329 3.62 417452 78 15669 402701 3.75 418370 79 15130 397253 3.67 412383 80 14949 395176 3.64 410125 81 15199 389320 3.76 404519 82 14201 383696 3.57 397897 83 14630 377682 3.73 392312 84 13932 374932 3.58 388864 85 13656 368093 3.58 381749 86 14217 365972 3.74 380189 87 13941 362391 3.70 376332 88 13592 362103 3.62 375695 89 14214 358682 3.81 372896 90 14055 355036 3.81 369091 91 13928 349702 3.83 363630 92 13199 344989 3.68 358188 93 12969 343184 3.64 356153 94 12889 334125 3.71 347014 95 12505 329404 3.66 341909 96 12650 329311 3.70 341961 97 12572 322130 3.76 334702 98 12403 318537 3.75 330940 99 12780 317917 3.86 330697 100 12189 311790 3.76 323979 101 11874 308953 3.70 320827 102 12401 306861 3.88 319262 103 11648 300836 3.73 312484 104 11515 295325 3.75 306840 105 11449 292224 3.77 303673 106 11391 286151 3.83 297542 107 11338 283777 3.84 295115 108 11502 279687 3.95 291189 109 10767 274953 3.77 285720 110 11133 271694 3.94 282827 111 10948 268923 3.91 279871 112 10556 266267 3.81 276823 113 10127 264338 3.69 274465 114 10055 261484 3.70 271539 115 10073 256267 3.78 266340 116 9600 251148 3.68 260748 117 9652 247715 3.75 257367 118 9414 243491 3.72 252905 119 9642 240929 3.85 250571 120 9219 237598 3.74 246817 121 9333 232728 3.86 242061 122 8729 232146 3.62 240875 123 8742 228504 3.68 237246 124 8711 226811 3.70 235522 125 8647 222720 3.74 231367 126 8457 218865 3.72 227322 127 8265 213205 3.73 221470 128 8142 210212 3.73 218354 129 8421 206512 3.92 214933 130 8038 202733 3.81 210771 131 7614 200337 3.66 207951 132 7940 197173 3.87 205113 133 7726 193991 3.83 201717 134 7551 193138 3.76 200689 135 7408 191171 3.73 198579 136 7200 186899 3.71 194099 137 7391 184467 3.85 191858 138 7132 181655 3.78 188787 139 7124 176975 3.87 184099 140 7184 174608 3.95 181792 141 6951 170680 3.91 177631 142 6685 167752 3.83 174437 143 6826 166400 3.94 173226 144 6698 164355 3.92 171053 145 6657 161425 3.96 168082 146 6450 156500 3.96 162950 147 6328 155172 3.92 161500 148 6090 152537 3.84 158627 149 6175 146550 4.04 152725 150 5807 132740 4.19 138547 151 3855 0 100.00 3855 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 71076 3386236 2.06 3457312 2 72434 3134532 2.26 3206966 3 57691 2599293 2.17 2656984 4 65500 2797233 2.29 2862733 5 62198 2867990 2.12 2930188 6 68805 3032599 2.22 3101404 7 66757 2955964 2.21 3022721 8 66613 2915711 2.23 2982324 9 69396 3045650 2.23 3115046 10 61698 2635431 2.29 2697129 11 65978 2739019 2.35 2804997 12 59861 2627815 2.23 2687676 13 56308 2393803 2.30 2450111 14 58004 2486648 2.28 2544652 15 56195 2388077 2.30 2444272 16 54832 2301390 2.33 2356222 17 57854 2354445 2.40 2412299 18 57874 2386523 2.37 2444397 19 60408 2428128 2.43 2488536 20 58331 2408075 2.37 2466406 21 58646 2376851 2.41 2435497 22 57681 2341275 2.40 2398956 23 54239 2277659 2.33 2331898 24 53684 2231545 2.35 2285229 25 53186 2216880 2.34 2270066 26 53658 2201405 2.38 2255063 27 55507 2209367 2.45 2264874 28 55006 2208475 2.43 2263481 29 55150 2199506 2.45 2254656 30 55857 2179292 2.50 2235149 31 55621 2161922 2.51 2217543 32 53031 2122320 2.44 2175351 33 50869 2071871 2.40 2122740 34 50807 2045275 2.42 2096082 35 50662 2016504 2.45 2067166 36 50007 2009600 2.43 2059607 37 50697 2020672 2.45 2071369 38 51073 2006936 2.48 2058009 39 50157 1991048 2.46 2041205 40 53405 1983972 2.62 2037377 41 48875 1942391 2.45 1991266 42 49418 1927112 2.50 1976530 43 47886 1900254 2.46 1948140 44 48614 1862430 2.54 1911044 45 46270 1837571 2.46 1883841 46 47207 1820824 2.53 1868031 47 46057 1812333 2.48 1858390 48 47440 1795937 2.57 1843377 49 46983 1790089 2.56 1837072 50 48513 1780237 2.65 1828750 51 45240 1754202 2.51 1799442 52 45607 1743584 2.55 1789191 53 45157 1720151 2.56 1765308 54 43590 1688875 2.52 1732465 55 42976 1686415 2.49 1729391 56 43366 1668490 2.53 1711856 57 43048 1646111 2.55 1689159 58 43657 1646604 2.58 1690261 59 42588 1615119 2.57 1657707 60 42273 1604587 2.57 1646860 61 42139 1600787 2.56 1642926 62 41045 1565764 2.55 1606809 63 40452 1555014 2.54 1595466 64 39672 1535892 2.52 1575564 65 39383 1523952 2.52 1563335 66 39268 1507684 2.54 1546952 67 39521 1508363 2.55 1547884 68 39169 1490353 2.56 1529522 69 39701 1478808 2.61 1518509 70 38611 1463024 2.57 1501635 71 38372 1447323 2.58 1485695 72 37766 1426371 2.58 1464137 73 37595 1414442 2.59 1452037 74 37193 1396465 2.59 1433658 75 35685 1372650 2.53 1408335 76 34871 1362113 2.50 1396984 77 36166 1352466 2.60 1388632 78 35557 1349499 2.57 1385056 79 36591 1344239 2.65 1380830 80 35046 1335558 2.56 1370604 81 35101 1321613 2.59 1356714 82 35593 1314457 2.64 1350050 83 34955 1295225 2.63 1330180 84 33351 1271852 2.56 1305203 85 33145 1260703 2.56 1293848 86 32253 1237939 2.54 1270192 87 32860 1226153 2.61 1259013 88 32704 1218901 2.61 1251605 89 32451 1210867 2.61 1243318 90 32186 1203930 2.60 1236116 91 32785 1194084 2.67 1226869 92 31814 1175527 2.64 1207341 93 31317 1160252 2.63 1191569 94 30510 1146051 2.59 1176561 95 29950 1130403 2.58 1160353 96 29305 1112600 2.57 1141905 97 29339 1105044 2.59 1134383 98 29228 1092454 2.61 1121682 99 29048 1080657 2.62 1109705 100 28692 1071527 2.61 1100219 101 28531 1056994 2.63 1085525 102 28264 1042845 2.64 1071109 103 28316 1030768 2.67 1059084 104 27565 1012593 2.65 1040158 105 26974 1000037 2.63 1027011 106 26841 987152 2.65 1013993 107 26043 970393 2.61 996436 108 26226 959139 2.66 985365 109 25880 946056 2.66 971936 110 26101 937592 2.71 963693 111 25807 924220 2.72 950027 112 25692 915620 2.73 941312 113 24523 904096 2.64 928619 114 24624 893484 2.68 918108 115 24188 885035 2.66 909223 116 24103 873640 2.68 897743 117 23281 859521 2.64 882802 118 23210 848238 2.66 871448 119 22722 833657 2.65 856379 120 22801 819005 2.71 841806 121 22339 808341 2.69 830680 122 22094 792459 2.71 814553 123 21414 782207 2.66 803621 124 21545 777422 2.70 798967 125 21515 769011 2.72 790526 126 21481 761269 2.74 782750 127 20647 751201 2.68 771848 128 20464 739037 2.69 759501 129 20126 723505 2.71 743631 130 20346 715497 2.76 735843 131 19496 701328 2.70 720824 132 19491 687077 2.76 706568 133 18693 676561 2.69 695254 134 18994 669697 2.76 688691 135 18480 664471 2.71 682951 136 18780 661287 2.76 680067 137 18369 648710 2.75 667079 138 17859 639022 2.72 656881 139 18076 628119 2.80 646195 140 17200 616050 2.72 633250 141 17275 602891 2.79 620166 142 16653 594102 2.73 610755 143 16398 582521 2.74 598919 144 15881 574264 2.69 590145 145 16424 569788 2.80 586212 146 15708 557818 2.74 573526 147 15818 553117 2.78 568935 148 15109 543923 2.70 559032 149 15086 526393 2.79 541479 150 13582 472360 2.79 485942 151 10160 0 100.00 10160