CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 77109 264618 22.56 341727 2 83195 365285 18.55 448480 3 104075 511634 16.90 615709 4 101642 453873 18.30 555515 5 98606 443540 18.19 542146 6 98115 449643 17.91 547758 7 102316 435677 19.02 537993 8 105543 471111 18.30 576654 9 100756 452373 18.22 553129 10 102188 472050 17.80 574238 11 106092 474034 18.29 580126 12 97567 443105 18.05 540672 13 99427 442652 18.34 542079 14 95928 432962 18.14 528890 15 96615 428724 18.39 525339 16 100000 447390 18.27 547390 17 98141 441417 18.19 539558 18 98294 441777 18.20 540071 19 97802 445312 18.01 543114 20 98285 444352 18.11 542637 21 99449 446716 18.21 546165 22 97461 442059 18.06 539520 23 99975 448715 18.22 548690 24 99436 439459 18.45 538895 25 98760 435883 18.47 534643 26 96753 436539 18.14 533292 27 100998 445425 18.48 546423 28 98735 443099 18.22 541834 29 98424 442013 18.21 540437 30 100394 446810 18.35 547204 31 100116 447617 18.28 547733 32 100752 447886 18.36 548638 33 101983 450903 18.45 552886 34 102059 449646 18.50 551705 35 101902 447264 18.56 549166 36 103411 451360 18.64 554771 37 101977 453144 18.37 555121 38 103775 455084 18.57 558859 39 103006 459378 18.32 562384 40 103080 458400 18.36 561480 41 103864 458387 18.47 562251 42 104659 461328 18.49 565987 43 104286 460616 18.46 564902 44 104809 459838 18.56 564647 45 105599 458814 18.71 564413 46 105955 460831 18.69 566786 47 105709 462198 18.61 567907 48 104289 461670 18.43 565959 49 105749 462558 18.61 568307 50 105225 463336 18.51 568561 51 105557 464663 18.51 570220 52 105308 461906 18.57 567214 53 106207 465431 18.58 571638 54 106197 462410 18.68 568607 55 105250 459962 18.62 565212 56 106503 461790 18.74 568293 57 106292 464338 18.63 570630 58 106556 463272 18.70 569828 59 105469 461036 18.62 566505 60 106622 463541 18.70 570163 61 105227 462013 18.55 567240 62 106737 465026 18.67 571763 63 106682 467083 18.59 573765 64 107526 468324 18.67 575850 65 106697 466033 18.63 572730 66 107404 466038 18.73 573442 67 106013 462818 18.64 568831 68 107093 463639 18.76 570732 69 105299 462151 18.56 567450 70 104903 462633 18.48 567536 71 105204 464551 18.46 569755 72 106270 463186 18.66 569456 73 105638 464529 18.53 570167 74 104963 465271 18.41 570234 75 104801 461547 18.50 566348 76 105771 461567 18.64 567338 77 105941 464188 18.58 570129 78 104650 463957 18.40 568607 79 104596 464796 18.37 569392 80 105783 467806 18.44 573589 81 104197 463779 18.35 567976 82 104456 463301 18.40 567757 83 103735 461365 18.36 565100 84 103351 460260 18.34 563611 85 103566 460672 18.36 564238 86 104286 465840 18.29 570126 87 102908 457821 18.35 560729 88 102266 459923 18.19 562189 89 102209 459408 18.20 561617 90 101844 465231 17.96 567075 91 101202 459306 18.06 560508 92 100443 451934 18.18 552377 93 100690 455474 18.10 556164 94 100696 458078 18.02 558774 95 100492 454820 18.10 555312 96 99142 452086 17.99 551228 97 98193 446432 18.03 544625 98 98974 446042 18.16 545016 99 97907 450160 17.86 548067 100 97836 446701 17.97 544537 101 96619 445279 17.83 541898 102 96361 444119 17.83 540480 103 94581 442357 17.61 536938 104 96227 443419 17.83 539646 105 94136 440350 17.61 534486 106 93166 431913 17.74 525079 107 92526 433348 17.59 525874 108 92009 431869 17.56 523878 109 90678 430878 17.39 521556 110 91299 428327 17.57 519626 111 90444 432846 17.28 523290 112 89192 427180 17.27 516372 113 89333 426996 17.30 516329 114 89270 426989 17.29 516259 115 88308 425828 17.18 514136 116 87587 425306 17.08 512893 117 86840 421973 17.07 508813 118 85992 416335 17.12 502327 119 84652 414298 16.97 498950 120 84227 413386 16.93 497613 121 83284 410445 16.87 493729 122 82854 408179 16.87 491033 123 81836 409557 16.65 491393 124 81135 406302 16.65 487437 125 80235 402926 16.61 483161 126 79383 398816 16.60 478199 127 78820 398737 16.50 477557 128 78251 398000 16.43 476251 129 77179 392089 16.45 469268 130 75558 385498 16.39 461056 131 74823 386262 16.23 461085 132 74498 383397 16.27 457895 133 73277 377312 16.26 450589 134 73442 376320 16.33 449762 135 72046 372806 16.20 444852 136 71459 372580 16.09 444039 137 71149 370977 16.09 442126 138 70001 369222 15.94 439223 139 69358 367266 15.89 436624 140 67709 362269 15.75 429978 141 67408 358642 15.82 426050 142 66557 352128 15.90 418685 143 65644 347377 15.89 413021 144 64091 344567 15.68 408658 145 63658 341386 15.72 405044 146 62462 340836 15.49 403298 147 63392 344275 15.55 407667 148 61371 338613 15.34 399984 149 60795 335319 15.35 396114 150 58521 335123 14.87 393644 151 54901 304459 15.28 359360 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 22772 508416 4.29 531188 2 29009 651343 4.26 680352 3 33726 803618 4.03 837344 4 29336 672011 4.18 701347 5 26725 641040 4.00 667765 6 28034 639812 4.20 667846 7 29519 666256 4.24 695775 8 28534 639856 4.27 668390 9 27976 653100 4.11 681076 10 27722 657574 4.05 685296 11 28168 664079 4.07 692247 12 28300 652304 4.16 680604 13 26958 628577 4.11 655535 14 26121 639013 3.93 665134 15 27004 660743 3.93 687747 16 26129 650112 3.86 676241 17 24975 631494 3.80 656469 18 25082 641899 3.76 666981 19 25166 638712 3.79 663878 20 24026 639261 3.62 663287 21 24655 638614 3.72 663269 22 24173 651748 3.58 675921 23 24389 660587 3.56 684976 24 25069 660883 3.65 685952 25 23990 662137 3.50 686127 26 24182 663040 3.52 687222 27 23914 661928 3.49 685842 28 23610 654902 3.48 678512 29 23395 655889 3.44 679284 30 23236 659554 3.40 682790 31 23986 673329 3.44 697315 32 24309 670573 3.50 694882 33 23670 681604 3.36 705274 34 24461 675597 3.49 700058 35 24521 685904 3.45 710425 36 24302 685141 3.43 709443 37 24608 676242 3.51 700850 38 23795 672258 3.42 696053 39 24058 683517 3.40 707575 40 24321 683852 3.43 708173 41 24565 691566 3.43 716131 42 24334 688195 3.42 712529 43 24621 687918 3.46 712539 44 24744 692111 3.45 716855 45 24815 698151 3.43 722966 46 25826 694222 3.59 720048 47 24993 694490 3.47 719483 48 24083 690019 3.37 714102 49 25146 689267 3.52 714413 50 25017 686964 3.51 711981 51 24381 688114 3.42 712495 52 25204 691111 3.52 716315 53 24700 691945 3.45 716645 54 25696 701801 3.53 727497 55 25876 701549 3.56 727425 56 25373 693375 3.53 718748 57 25584 687317 3.59 712901 58 24895 679905 3.53 704800 59 25311 678830 3.59 704141 60 24725 679968 3.51 704693 61 25424 687180 3.57 712604 62 25533 690791 3.56 716324 63 25078 704896 3.44 729974 64 25579 696982 3.54 722561 65 25842 698608 3.57 724450 66 25348 699566 3.50 724914 67 25830 703000 3.54 728830 68 25346 700778 3.49 726124 69 24985 684999 3.52 709984 70 25398 690664 3.55 716062 71 25180 694225 3.50 719405 72 25068 698741 3.46 723809 73 25586 696549 3.54 722135 74 24913 696808 3.45 721721 75 26089 704523 3.57 730612 76 26046 705691 3.56 731737 77 25215 706407 3.45 731622 78 24939 712915 3.38 737854 79 25689 696087 3.56 721776 80 25499 696770 3.53 722269 81 25056 699667 3.46 724723 82 25108 687350 3.52 712458 83 25269 688540 3.54 713809 84 25911 696351 3.59 722262 85 25642 700699 3.53 726341 86 25290 705263 3.46 730553 87 25187 699409 3.48 724596 88 25895 687635 3.63 713530 89 25074 691267 3.50 716341 90 24204 681720 3.43 705924 91 24846 675203 3.55 700049 92 25234 671705 3.62 696939 93 24328 674653 3.48 698981 94 24894 671415 3.58 696309 95 25136 668414 3.62 693550 96 24647 663775 3.58 688422 97 24894 662543 3.62 687437 98 24761 658550 3.62 683311 99 24336 661807 3.55 686143 100 25305 657308 3.71 682613 101 24848 653644 3.66 678492 102 24250 652649 3.58 676899 103 24511 650829 3.63 675340 104 24694 648395 3.67 673089 105 23996 647001 3.58 670997 106 24035 644488 3.60 668523 107 23977 643022 3.59 666999 108 24124 638827 3.64 662951 109 24356 642530 3.65 666886 110 23614 649189 3.51 672803 111 23557 637098 3.57 660655 112 23486 638967 3.55 662453 113 23495 635020 3.57 658515 114 22743 632370 3.47 655113 115 23160 622789 3.59 645949 116 22736 622427 3.52 645163 117 23029 625370 3.55 648399 118 22589 622590 3.50 645179 119 22485 612853 3.54 635338 120 22355 609382 3.54 631737 121 22543 607055 3.58 629598 122 22229 607073 3.53 629302 123 22323 600932 3.58 623255 124 21800 595009 3.53 616809 125 21715 590961 3.54 612676 126 21736 578839 3.62 600575 127 22005 575292 3.68 597297 128 21365 571406 3.60 592771 129 21353 562980 3.65 584333 130 21265 558785 3.67 580050 131 20784 554217 3.61 575001 132 20838 555168 3.62 576006 133 20352 547439 3.58 567791 134 19748 539503 3.53 559251 135 19888 535904 3.58 555792 136 20160 533671 3.64 553831 137 19580 529150 3.57 548730 138 19583 523722 3.60 543305 139 19478 516853 3.63 536331 140 19348 511774 3.64 531122 141 19140 505603 3.65 524743 142 18969 500255 3.65 519224 143 18657 496320 3.62 514977 144 18299 492939 3.58 511238 145 18726 491413 3.67 510139 146 19264 488729 3.79 507993 147 19399 483945 3.85 503344 148 19057 477465 3.84 496522 149 18816 474812 3.81 493628 150 17966 469224 3.69 487190 151 17391 435869 3.84 453260 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 89879 2407912 3.60 2497791 2 103533 2802342 3.56 2905875 3 118711 3161802 3.62 3280513 4 97331 2642178 3.55 2739509 5 94689 2585735 3.53 2680424 6 95756 2633070 3.51 2728826 7 97458 2726590 3.45 2824048 8 101457 2834623 3.46 2936080 9 102086 2882286 3.42 2984372 10 100227 2878144 3.37 2978371 11 102554 2928179 3.38 3030733 12 96395 2875265 3.24 2971660 13 94321 2863344 3.19 2957665 14 90286 2861577 3.06 2951863 15 87072 2818415 3.00 2905487 16 84771 2822830 2.92 2907601 17 81950 2784817 2.86 2866767 18 78646 2809367 2.72 2888013 19 77342 2822333 2.67 2899675 20 75629 2849084 2.59 2924713 21 74481 2873427 2.53 2947908 22 72393 2898921 2.44 2971314 23 71491 2911360 2.40 2982851 24 68694 2901356 2.31 2970050 25 68602 2879408 2.33 2948010 26 65217 2839319 2.25 2904536 27 65142 2852066 2.23 2917208 28 64115 2871910 2.18 2936025 29 64541 2894239 2.18 2958780 30 64281 2914368 2.16 2978649 31 65016 2939736 2.16 3004752 32 65004 2952178 2.15 3017182 33 64480 2952636 2.14 3017116 34 63945 2920604 2.14 2984549 35 62064 2903651 2.09 2965715 36 62224 2904257 2.10 2966481 37 62117 2902886 2.10 2965003 38 61076 2907760 2.06 2968836 39 61898 2940016 2.06 3001914 40 62173 2931128 2.08 2993301 41 62064 2942275 2.07 3004339 42 62615 2951144 2.08 3013759 43 62121 2951111 2.06 3013232 44 62313 2947753 2.07 3010066 45 61899 2940961 2.06 3002860 46 61672 2921086 2.07 2982758 47 60492 2906122 2.04 2966614 48 60161 2914490 2.02 2974651 49 61434 2913867 2.06 2975301 50 62047 2942769 2.06 3004816 51 60847 2944595 2.02 3005442 52 62182 2915090 2.09 2977272 53 62337 2948526 2.07 3010863 54 61958 2940466 2.06 3002424 55 61964 2929519 2.07 2991483 56 62057 2933123 2.07 2995180 57 60002 2917569 2.02 2977571 58 61140 2930573 2.04 2991713 59 61839 2929864 2.07 2991703 60 61880 2952208 2.05 3014088 61 62024 2973347 2.04 3035371 62 63203 2983453 2.07 3046656 63 62962 2961744 2.08 3024706 64 63100 2945731 2.10 3008831 65 61989 2947734 2.06 3009723 66 61987 2950647 2.06 3012634 67 61527 2950771 2.04 3012298 68 62102 2947977 2.06 3010079 69 63088 2968124 2.08 3031212 70 62320 2967015 2.06 3029335 71 63311 2990224 2.07 3053535 72 62593 2996403 2.05 3058996 73 63108 2971366 2.08 3034474 74 63117 2973157 2.08 3036274 75 62189 2960183 2.06 3022372 76 62270 2944038 2.07 3006308 77 61854 2936864 2.06 2998718 78 61607 2920910 2.07 2982517 79 61637 2903815 2.08 2965452 80 61720 2918056 2.07 2979776 81 61189 2923512 2.05 2984701 82 62798 2926463 2.10 2989261 83 62260 2910550 2.09 2972810 84 62427 2897835 2.11 2960262 85 61267 2875290 2.09 2936557 86 61723 2877424 2.10 2939147 87 61294 2870309 2.09 2931603 88 61205 2841855 2.11 2903060 89 61206 2851573 2.10 2912779 90 61007 2870697 2.08 2931704 91 60884 2879884 2.07 2940768 92 61696 2858087 2.11 2919783 93 62485 2868523 2.13 2931008 94 62437 2859060 2.14 2921497 95 61702 2843800 2.12 2905502 96 61429 2822855 2.13 2884284 97 60633 2806007 2.12 2866640 98 60655 2802118 2.12 2862773 99 60604 2795122 2.12 2855726 100 60618 2797409 2.12 2858027 101 60374 2794137 2.12 2854511 102 60843 2816125 2.11 2876968 103 60603 2782960 2.13 2843563 104 61313 2791664 2.15 2852977 105 60166 2773852 2.12 2834018 106 60582 2745737 2.16 2806319 107 60751 2730367 2.18 2791118 108 59954 2704753 2.17 2764707 109 59753 2690622 2.17 2750375 110 59914 2677970 2.19 2737884 111 59826 2671007 2.19 2730833 112 59933 2668394 2.20 2728327 113 59726 2652143 2.20 2711869 114 59461 2647220 2.20 2706681 115 59143 2642444 2.19 2701587 116 59794 2624865 2.23 2684659 117 59924 2607692 2.25 2667616 118 59327 2591763 2.24 2651090 119 58304 2566513 2.22 2624817 120 58676 2540005 2.26 2598681 121 58122 2525513 2.25 2583635 122 58105 2516038 2.26 2574143 123 57037 2499708 2.23 2556745 124 56450 2470861 2.23 2527311 125 56817 2450304 2.27 2507121 126 57330 2447438 2.29 2504768 127 56902 2442640 2.28 2499542 128 55618 2419396 2.25 2475014 129 55891 2398426 2.28 2454317 130 55381 2383216 2.27 2438597 131 55825 2357784 2.31 2413609 132 54969 2349855 2.29 2404824 133 53457 2321133 2.25 2374590 134 53539 2293663 2.28 2347202 135 54451 2285447 2.33 2339898 136 53199 2281675 2.28 2334874 137 53306 2267147 2.30 2320453 138 51884 2244051 2.26 2295935 139 51808 2206578 2.29 2258386 140 51379 2189888 2.29 2241267 141 51437 2164086 2.32 2215523 142 51006 2130641 2.34 2181647 143 50506 2115201 2.33 2165707 144 50824 2099168 2.36 2149992 145 50890 2081582 2.39 2132472 146 51253 2080338 2.40 2131591 147 52470 2085933 2.45 2138403 148 52940 2081986 2.48 2134926 149 52327 2058621 2.48 2110948 150 50519 2014118 2.45 2064637 151 47434 1893731 2.44 1941165 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14576 409081 3.44 423657 2 17113 315434 5.15 332547 3 19362 265163 6.81 284525 4 29441 351654 7.73 381095 5 27502 326773 7.76 354275 6 27938 312812 8.20 340750 7 26993 304791 8.14 331784 8 28048 293988 8.71 322036 9 31288 308616 9.20 339904 10 30806 292878 9.52 323684 11 31413 299445 9.49 330858 12 33337 298529 10.05 331866 13 31535 273991 10.32 305526 14 32537 274796 10.59 307333 15 31283 264237 10.59 295520 16 31916 259535 10.95 291451 17 33032 265620 11.06 298652 18 32511 256421 11.25 288932 19 33769 251670 11.83 285439 20 32680 249151 11.60 281831 21 32582 245592 11.71 278174 22 32914 244865 11.85 277779 23 32517 238110 12.02 270627 24 32610 239057 12.00 271667 25 32981 234580 12.33 267561 26 33005 230400 12.53 263405 27 32388 228359 12.42 260747 28 32910 226657 12.68 259567 29 32628 222994 12.76 255622 30 32230 219251 12.82 251481 31 32594 216601 13.08 249195 32 32590 214877 13.17 247467 33 32168 211898 13.18 244066 34 32527 210173 13.40 242700 35 32249 207010 13.48 239259 36 31801 203172 13.53 234973 37 32108 201220 13.76 233328 38 31206 200959 13.44 232165 39 31692 197438 13.83 229130 40 31007 195269 13.70 226276 41 30570 192125 13.73 222695 42 30185 189145 13.76 219330 43 30146 187143 13.87 217289 44 30589 185819 14.13 216408 45 30331 182780 14.23 213111 46 29513 179599 14.11 209112 47 29892 176734 14.47 206626 48 29332 174109 14.42 203441 49 28675 171312 14.34 199987 50 28733 169879 14.47 198612 51 28066 167246 14.37 195312 52 28160 163812 14.67 191972 53 27712 162560 14.56 190272 54 28006 160660 14.84 188666 55 27282 156672 14.83 183954 56 26908 154619 14.82 181527 57 26748 151965 14.97 178713 58 26539 150752 14.97 177291 59 26461 149480 15.04 175941 60 25628 144724 15.04 170352 61 25920 143935 15.26 169855 62 25500 141368 15.28 166868 63 25562 141266 15.32 166828 64 25333 138701 15.44 164034 65 25557 139338 15.50 164895 66 24595 135509 15.36 160104 67 24859 133820 15.67 158679 68 24071 131077 15.51 155148 69 24310 128386 15.92 152696 70 23721 126483 15.79 150204 71 23389 124261 15.84 147650 72 23019 122450 15.82 145469 73 23202 122179 15.96 145381 74 23207 120801 16.12 144008 75 22574 118580 15.99 141154 76 22424 116476 16.14 138900 77 22498 115448 16.31 137946 78 22446 114585 16.38 137031 79 22183 112698 16.45 134881 80 21903 111382 16.43 133285 81 21793 110630 16.46 132423 82 21326 107267 16.58 128593 83 20651 106195 16.28 126846 84 20503 104607 16.39 125110 85 20742 103688 16.67 124430 86 20484 101443 16.80 121927 87 20777 101310 17.02 122087 88 19961 98664 16.83 118625 89 19891 98639 16.78 118530 90 19622 97116 16.81 116738 91 19500 96165 16.86 115665 92 19041 94441 16.78 113482 93 19015 91662 17.18 110677 94 18592 91203 16.93 109795 95 18534 90644 16.98 109178 96 18412 89365 17.08 107777 97 18280 87948 17.21 106228 98 17964 85909 17.29 103873 99 17916 85528 17.32 103444 100 17620 84635 17.23 102255 101 17207 83272 17.12 100479 102 17219 82659 17.24 99878 103 17051 81092 17.37 98143 104 16782 79143 17.49 95925 105 16692 79319 17.39 96011 106 16422 77646 17.46 94068 107 15756 75974 17.18 91730 108 15730 75329 17.27 91059 109 15764 74163 17.53 89927 110 15686 72704 17.75 88390 111 15045 72262 17.23 87307 112 15367 71618 17.67 86985 113 14896 70329 17.48 85225 114 15054 70498 17.60 85552 115 14706 69069 17.55 83775 116 14508 68147 17.55 82655 117 14322 68109 17.37 82431 118 14276 67641 17.43 81917 119 13908 65190 17.58 79098 120 13854 65207 17.52 79061 121 13665 63833 17.63 77498 122 13340 62863 17.51 76203 123 13131 61655 17.56 74786 124 13237 62130 17.56 75367 125 12989 59705 17.87 72694 126 12827 59823 17.66 72650 127 12718 57859 18.02 70577 128 12667 58136 17.89 70803 129 12482 57172 17.92 69654 130 12167 55475 17.99 67642 131 12027 54796 18.00 66823 132 12027 54241 18.15 66268 133 11607 53870 17.73 65477 134 11650 52813 18.07 64463 135 11456 52131 18.02 63587 136 11366 51463 18.09 62829 137 11196 51267 17.92 62463 138 11135 50658 18.02 61793 139 11144 49901 18.26 61045 140 11110 49746 18.26 60856 141 10663 48188 18.12 58851 142 10890 47611 18.62 58501 143 10317 45898 18.35 56215 144 10215 45448 18.35 55663 145 10090 44520 18.48 54610 146 9896 44278 18.27 54174 147 9763 43592 18.30 53355 148 9932 43160 18.71 53092 149 9565 41423 18.76 50988 150 9497 36357 20.71 45854 151 8282 0 100.00 8282 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14518 477164 2.95 491682 2 14804 480835 2.99 495639 3 14583 438530 3.22 453113 4 18312 394785 4.43 413097 5 16192 504033 3.11 520225 6 13645 440753 3.00 454398 7 12109 396352 2.96 408461 8 12285 382680 3.11 394965 9 12536 387420 3.13 399956 10 12479 365342 3.30 377821 11 11473 369393 3.01 380866 12 11477 373786 2.98 385263 13 11316 365124 3.01 376440 14 11352 357192 3.08 368544 15 11389 343783 3.21 355172 16 11178 342082 3.16 353260 17 11151 347718 3.11 358869 18 11959 348075 3.32 360034 19 10898 331400 3.18 342298 20 11123 329707 3.26 340830 21 11009 323997 3.29 335006 22 10385 318918 3.15 329303 23 10449 317416 3.19 327865 24 9733 315270 2.99 325003 25 10227 319106 3.11 329333 26 10324 322025 3.11 332349 27 9958 317587 3.04 327545 28 9681 312510 3.00 322191 29 9933 305108 3.15 315041 30 9731 299211 3.15 308942 31 9313 298947 3.02 308260 32 9089 291029 3.03 300118 33 9322 291686 3.10 301008 34 9242 287679 3.11 296921 35 9407 291407 3.13 300814 36 9336 285788 3.16 295124 37 9354 283267 3.20 292621 38 9356 280212 3.23 289568 39 9112 274115 3.22 283227 40 8912 267789 3.22 276701 41 8475 268168 3.06 276643 42 8530 264924 3.12 273454 43 8886 262069 3.28 270955 44 8724 261602 3.23 270326 45 8772 256346 3.31 265118 46 8743 254383 3.32 263126 47 8653 247714 3.38 256367 48 9089 247301 3.54 256390 49 8515 241771 3.40 250286 50 8147 239157 3.29 247304 51 8361 233204 3.46 241565 52 8337 231030 3.48 239367 53 8417 226794 3.58 235211 54 8146 224810 3.50 232956 55 8011 222329 3.48 230340 56 8365 221139 3.64 229504 57 7810 215226 3.50 223036 58 8016 212970 3.63 220986 59 7802 205865 3.65 213667 60 7558 201703 3.61 209261 61 7261 197945 3.54 205206 62 7488 197114 3.66 204602 63 7379 196172 3.63 203551 64 7713 196164 3.78 203877 65 7392 195253 3.65 202645 66 7468 192960 3.73 200428 67 7142 192315 3.58 199457 68 7404 189492 3.76 196896 69 7090 184589 3.70 191679 70 6983 181499 3.70 188482 71 6955 176294 3.80 183249 72 6704 174445 3.70 181149 73 6632 172856 3.69 179488 74 6636 173290 3.69 179926 75 6610 171273 3.72 177883 76 6511 168457 3.72 174968 77 6706 168123 3.84 174829 78 6718 165667 3.90 172385 79 6327 163583 3.72 169910 80 6328 161579 3.77 167907 81 6420 158116 3.90 164536 82 6217 156154 3.83 162371 83 6226 153579 3.90 159805 84 6065 150394 3.88 156459 85 5792 147616 3.78 153408 86 6065 147620 3.95 153685 87 5868 147422 3.83 153290 88 5818 146851 3.81 152669 89 5781 144625 3.84 150406 90 5914 140529 4.04 146443 91 5849 138261 4.06 144110 92 5616 135332 3.98 140948 93 5260 133398 3.79 138658 94 5488 129408 4.07 134896 95 5291 128480 3.96 133771 96 5255 127957 3.94 133212 97 5299 127139 4.00 132438 98 5134 124438 3.96 129572 99 5265 123660 4.08 128925 100 5146 121066 4.08 126212 101 5081 119667 4.07 124748 102 5015 117584 4.09 122599 103 4983 115158 4.15 120141 104 4873 113002 4.13 117875 105 4776 110915 4.13 115691 106 4774 110306 4.15 115080 107 4723 108160 4.18 112883 108 4632 108098 4.11 112730 109 4631 107034 4.15 111665 110 4739 105609 4.29 110348 111 4592 104867 4.20 109459 112 4443 104300 4.09 108743 113 4141 102689 3.88 106830 114 4254 100091 4.08 104345 115 4299 100110 4.12 104409 116 3963 98545 3.87 102508 117 4205 96475 4.18 100680 118 4031 95541 4.05 99572 119 4174 94406 4.23 98580 120 4011 94033 4.09 98044 121 4077 92096 4.24 96173 122 3859 90458 4.09 94317 123 3859 89327 4.14 93186 124 3945 88802 4.25 92747 125 3718 87387 4.08 91105 126 3618 85029 4.08 88647 127 3660 84019 4.17 87679 128 3682 82626 4.27 86308 129 3632 81839 4.25 85471 130 3514 80567 4.18 84081 131 3460 79002 4.20 82462 132 3423 77769 4.22 81192 133 3541 76896 4.40 80437 134 3435 75664 4.34 79099 135 3405 74955 4.35 78360 136 3295 73825 4.27 77120 137 3415 72699 4.49 76114 138 3463 71335 4.63 74798 139 3254 70909 4.39 74163 140 3346 69546 4.59 72892 141 3136 68446 4.38 71582 142 3044 66808 4.36 69852 143 3060 66536 4.40 69596 144 2987 64861 4.40 67848 145 2989 64480 4.43 67469 146 2975 62402 4.55 65377 147 2875 62177 4.42 65052 148 2830 61366 4.41 64196 149 2942 58938 4.75 61880 150 2635 53440 4.70 56075 151 1707 0 100.00 1707 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 53984 2163687 2.43 2217671 2 47408 1856392 2.49 1903800 3 41130 1740357 2.31 1781487 4 41640 1799411 2.26 1841051 5 39437 1867351 2.07 1906788 6 40778 1908308 2.09 1949086 7 40156 1864615 2.11 1904771 8 38444 1766649 2.13 1805093 9 38362 1764790 2.13 1803152 10 36495 1661558 2.15 1698053 11 37164 1669916 2.18 1707080 12 34796 1624145 2.10 1658941 13 33765 1549318 2.13 1583083 14 33682 1541408 2.14 1575090 15 33275 1503889 2.16 1537164 16 32952 1468886 2.19 1501838 17 33756 1488978 2.22 1522734 18 33465 1484998 2.20 1518463 19 33862 1487605 2.23 1521467 20 32749 1470310 2.18 1503059 21 32642 1456399 2.19 1489041 22 32697 1415076 2.26 1447773 23 31337 1390977 2.20 1422314 24 30913 1363340 2.22 1394253 25 29784 1360560 2.14 1390344 26 30440 1340351 2.22 1370791 27 30695 1360668 2.21 1391363 28 30428 1340330 2.22 1370758 29 30044 1338237 2.20 1368281 30 30180 1308513 2.25 1338693 31 30309 1298562 2.28 1328871 32 28646 1268211 2.21 1296857 33 27440 1237998 2.17 1265438 34 27658 1212435 2.23 1240093 35 27493 1203617 2.23 1231110 36 26699 1203159 2.17 1229858 37 27403 1201933 2.23 1229336 38 27252 1191280 2.24 1218532 39 27460 1175251 2.28 1202711 40 27652 1158293 2.33 1185945 41 26134 1146520 2.23 1172654 42 25609 1131161 2.21 1156770 43 25607 1113105 2.25 1138712 44 25329 1083870 2.28 1109199 45 24707 1069842 2.26 1094549 46 24566 1061036 2.26 1085602 47 24472 1054878 2.27 1079350 48 24550 1036351 2.31 1060901 49 24485 1026308 2.33 1050793 50 24329 1016623 2.34 1040952 51 23642 995128 2.32 1018770 52 23145 983183 2.30 1006328 53 22962 970263 2.31 993225 54 22615 955500 2.31 978115 55 22293 942811 2.31 965104 56 21950 931252 2.30 953202 57 22082 919590 2.34 941672 58 21693 917716 2.31 939409 59 21686 904694 2.34 926380 60 21156 882821 2.34 903977 61 21451 869703 2.41 891154 62 20461 844502 2.37 864963 63 20219 834867 2.36 855086 64 19605 822514 2.33 842119 65 19595 820010 2.33 839605 66 19372 807730 2.34 827102 67 19516 806853 2.36 826369 68 19399 797613 2.37 817012 69 19516 790131 2.41 809647 70 18450 770906 2.34 789356 71 19079 759169 2.45 778248 72 18176 744516 2.38 762692 73 18098 732631 2.41 750729 74 17812 722655 2.41 740467 75 17442 712839 2.39 730281 76 17207 703343 2.39 720550 77 17294 694444 2.43 711738 78 16716 692994 2.36 709710 79 17001 688564 2.41 705565 80 16468 675736 2.38 692204 81 16506 665634 2.42 682140 82 16805 661128 2.48 677933 83 16581 653954 2.47 670535 84 15707 643966 2.38 659673 85 15647 638137 2.39 653784 86 15671 628275 2.43 643946 87 15441 623618 2.42 639059 88 15056 617526 2.38 632582 89 14875 613150 2.37 628025 90 14810 605353 2.39 620163 91 15093 593891 2.48 608984 92 14860 582766 2.49 597626 93 14541 571658 2.48 586199 94 14124 565304 2.44 579428 95 14024 554211 2.47 568235 96 13721 552270 2.42 565991 97 13584 545620 2.43 559204 98 13108 543086 2.36 556194 99 13306 536646 2.42 549952 100 13364 529620 2.46 542984 101 13190 519534 2.48 532724 102 12880 509684 2.46 522564 103 12723 500892 2.48 513615 104 12627 494816 2.49 507443 105 12283 490844 2.44 503127 106 12332 483525 2.49 495857 107 12225 477373 2.50 489598 108 12129 472727 2.50 484856 109 12004 464066 2.52 476070 110 12101 460248 2.56 472349 111 11789 455997 2.52 467786 112 11824 448666 2.57 460490 113 11436 445670 2.50 457106 114 11335 439361 2.51 450696 115 11177 435070 2.50 446247 116 11183 430703 2.53 441886 117 10835 424719 2.49 435554 118 10909 419172 2.54 430081 119 10665 415674 2.50 426339 120 10818 410954 2.56 421772 121 10527 402104 2.55 412631 122 10369 396502 2.55 406871 123 10194 387730 2.56 397924 124 10264 383587 2.61 393851 125 10148 378941 2.61 389089 126 10112 375481 2.62 385593 127 9939 368433 2.63 378372 128 9857 364401 2.63 374258 129 9925 361481 2.67 371406 130 9994 358448 2.71 368442 131 9575 352654 2.64 362229 132 9451 345688 2.66 355139 133 9077 339258 2.61 348335 134 9314 336278 2.70 345592 135 9279 333576 2.71 342855 136 9016 328356 2.67 337372 137 8866 322596 2.67 331462 138 8681 318639 2.65 327320 139 8751 315109 2.70 323860 140 8562 310466 2.68 319028 141 8751 305994 2.78 314745 142 8604 300760 2.78 309364 143 8127 296764 2.67 304891 144 8115 290437 2.72 298552 145 8155 287358 2.76 295513 146 7765 281962 2.68 289727 147 7737 277065 2.72 284802 148 7634 271066 2.74 278700 149 7540 264247 2.77 271787 150 6708 239559 2.72 246267 151 4655 0 100.00 4655