ERR10684020.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 55408043 lines in total Total number of methylation call strings processed: 110816086 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2139057072 Total methylated C's in CpG context: 40992498 Total methylated C's in CHG context: 3862410 Total methylated C's in CHH context: 15565606 Total C to T conversions in CpG context: 216477181 Total C to T conversions in CHG context: 356329359 Total C to T conversions in CHH context: 1505830018 C methylated in CpG context: 15.9% C methylated in non-CpG context: 1.0%