CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 124835 467317 21.08 592152 2 123001 526484 18.94 649485 3 155072 671399 18.76 826471 4 159951 678756 19.07 838707 5 156310 661193 19.12 817503 6 156711 680774 18.71 837485 7 158162 654115 19.47 812277 8 166932 702971 19.19 869903 9 155456 663927 18.97 819383 10 156399 688085 18.52 844484 11 167859 701623 19.31 869482 12 158246 664607 19.23 822853 13 150068 662104 18.48 812172 14 151072 663179 18.55 814251 15 152947 656332 18.90 809279 16 157912 669059 19.10 826971 17 156034 659954 19.12 815988 18 157357 666232 19.11 823589 19 156568 666520 19.02 823088 20 157356 669552 19.03 826908 21 159375 676422 19.07 835797 22 157369 668545 19.05 825914 23 158576 674001 19.05 832577 24 159582 676594 19.08 836176 25 157542 672916 18.97 830458 26 158376 669219 19.14 827595 27 159115 676660 19.04 835775 28 157716 675610 18.93 833326 29 158799 677303 18.99 836102 30 159944 683540 18.96 843484 31 159500 682621 18.94 842121 32 159331 681300 18.95 840631 33 160441 684145 19.00 844586 34 160034 680329 19.04 840363 35 160483 680733 19.08 841216 36 161740 688625 19.02 850365 37 159690 685147 18.90 844837 38 160588 683995 19.01 844583 39 161208 691869 18.90 853077 40 161036 688517 18.96 849553 41 161185 689999 18.94 851184 42 163030 696861 18.96 859891 43 162110 691423 18.99 853533 44 162777 691019 19.07 853796 45 164011 695595 19.08 859606 46 163294 693464 19.06 856758 47 162888 692182 19.05 855070 48 163119 698368 18.93 861487 49 161984 694567 18.91 856551 50 163087 695577 18.99 858664 51 163522 700798 18.92 864320 52 164086 696940 19.06 861026 53 163038 697504 18.95 860542 54 164355 700408 19.01 864763 55 163845 699224 18.98 863069 56 163430 697991 18.97 861421 57 163479 703656 18.85 867135 58 163707 700042 18.95 863749 59 163727 697728 19.01 861455 60 165295 704392 19.01 869687 61 163283 701323 18.89 864606 62 164244 699215 19.02 863459 63 164425 704769 18.92 869194 64 164024 701600 18.95 865624 65 163729 701403 18.93 865132 66 165019 705353 18.96 870372 67 164170 700249 18.99 864419 68 163711 702276 18.90 865987 69 165082 704751 18.98 869833 70 164083 701026 18.97 865109 71 163535 702093 18.89 865628 72 165567 704197 19.04 869764 73 163781 702075 18.92 865856 74 163849 703412 18.89 867261 75 164179 702717 18.94 866896 76 164567 700555 19.02 865122 77 163171 701172 18.88 864343 78 164639 705209 18.93 869848 79 164236 701418 18.97 865654 80 163110 699591 18.91 862701 81 163993 704195 18.89 868188 82 164152 700688 18.98 864840 83 163741 701280 18.93 865021 84 163606 705039 18.83 868645 85 162510 699695 18.85 862205 86 163149 702980 18.84 866129 87 163305 702968 18.85 866273 88 163711 700533 18.94 864244 89 162155 696843 18.88 858998 90 162497 701827 18.80 864324 91 162263 697884 18.86 860147 92 161938 696238 18.87 858176 93 162910 699973 18.88 862883 94 161931 697012 18.85 858943 95 161271 695478 18.82 856749 96 161542 697307 18.81 858849 97 161834 692923 18.93 854757 98 160789 690673 18.88 851462 99 160636 696603 18.74 857239 100 160088 689825 18.84 849913 101 159236 688993 18.77 848229 102 159572 690796 18.77 850368 103 159031 685316 18.83 844347 104 158312 686529 18.74 844841 105 158844 688570 18.74 847414 106 157596 684539 18.71 842135 107 157758 680221 18.83 837979 108 156860 684239 18.65 841099 109 156788 679792 18.74 836580 110 155785 676984 18.71 832769 111 155968 681117 18.63 837085 112 155887 675362 18.75 831249 113 155153 674536 18.70 829689 114 155397 675734 18.70 831131 115 153852 672227 18.62 826079 116 154277 670878 18.70 825155 117 154039 671196 18.67 825235 118 152705 666997 18.63 819702 119 152086 666845 18.57 818931 120 152567 667234 18.61 819801 121 151498 661709 18.63 813207 122 151385 659193 18.68 810578 123 150249 661178 18.52 811427 124 150194 659766 18.54 809960 125 149732 657487 18.55 807219 126 149583 658222 18.52 807805 127 148823 652739 18.57 801562 128 148165 652694 18.50 800859 129 147751 652560 18.46 800311 130 146410 647537 18.44 793947 131 146323 645315 18.48 791638 132 145873 646683 18.41 792556 133 144777 640412 18.44 785189 134 145608 641457 18.50 787065 135 143747 640733 18.32 784480 136 143287 638618 18.33 781905 137 141873 634626 18.27 776499 138 142869 635512 18.35 778381 139 141422 629603 18.34 771025 140 140376 627637 18.28 768013 141 140269 627921 18.26 768190 142 139066 623121 18.25 762187 143 138615 621072 18.25 759687 144 138326 621487 18.21 759813 145 136958 617521 18.15 754479 146 137258 616866 18.20 754124 147 137106 618463 18.15 755569 148 135795 612835 18.14 748630 149 133376 609762 17.95 743138 150 129841 606022 17.64 735863 151 116086 550165 17.42 666251 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 8917 858940 1.03 867857 2 28632 1004993 2.77 1033625 3 29719 1189535 2.44 1219254 4 28953 1138221 2.48 1167174 5 29804 1101939 2.63 1131743 6 30393 1131053 2.62 1161446 7 32392 1159573 2.72 1191965 8 31338 1121464 2.72 1152802 9 30263 1117864 2.64 1148127 10 31745 1146340 2.69 1178085 11 31461 1134853 2.70 1166314 12 30750 1140094 2.63 1170844 13 30146 1098433 2.67 1128579 14 29858 1099673 2.64 1129531 15 30673 1122573 2.66 1153246 16 30603 1130516 2.64 1161119 17 29438 1109732 2.58 1139170 18 29887 1115305 2.61 1145192 19 29837 1117585 2.60 1147422 20 29711 1125392 2.57 1155103 21 29603 1125757 2.56 1155360 22 29817 1128683 2.57 1158500 23 29687 1131111 2.56 1160798 24 29382 1135080 2.52 1164462 25 28893 1132272 2.49 1161165 26 29157 1133785 2.51 1162942 27 29426 1135435 2.53 1164861 28 28953 1137424 2.48 1166377 29 28924 1137792 2.48 1166716 30 28672 1144583 2.44 1173255 31 28634 1147912 2.43 1176546 32 28696 1144362 2.45 1173058 33 28604 1147050 2.43 1175654 34 28625 1149898 2.43 1178523 35 28678 1151339 2.43 1180017 36 28464 1156544 2.40 1185008 37 28550 1149638 2.42 1178188 38 28313 1150948 2.40 1179261 39 28327 1158274 2.39 1186601 40 28234 1157464 2.38 1185698 41 28174 1159161 2.37 1187335 42 28322 1162626 2.38 1190948 43 28480 1162548 2.39 1191028 44 27594 1162408 2.32 1190002 45 27732 1171422 2.31 1199154 46 27675 1165254 2.32 1192929 47 27804 1166311 2.33 1194115 48 27997 1168882 2.34 1196879 49 27810 1167825 2.33 1195635 50 27628 1169252 2.31 1196880 51 27317 1171939 2.28 1199256 52 27099 1168432 2.27 1195531 53 27104 1169725 2.26 1196829 54 27576 1178030 2.29 1205606 55 27273 1174838 2.27 1202111 56 27281 1176526 2.27 1203807 57 27133 1178233 2.25 1205366 58 26757 1174768 2.23 1201525 59 27033 1174572 2.25 1201605 60 26567 1176857 2.21 1203424 61 26561 1177824 2.21 1204385 62 27051 1178081 2.24 1205132 63 26772 1180995 2.22 1207767 64 26641 1176125 2.21 1202766 65 26418 1179001 2.19 1205419 66 26384 1181269 2.18 1207653 67 26425 1180084 2.19 1206509 68 26574 1181085 2.20 1207659 69 26032 1180837 2.16 1206869 70 25964 1178910 2.15 1204874 71 25907 1180577 2.15 1206484 72 25825 1182786 2.14 1208611 73 25782 1182081 2.13 1207863 74 25824 1178866 2.14 1204690 75 26069 1184011 2.15 1210080 76 26160 1182855 2.16 1209015 77 25809 1183484 2.13 1209293 78 25886 1187738 2.13 1213624 79 25453 1179352 2.11 1204805 80 25742 1182120 2.13 1207862 81 25558 1182627 2.12 1208185 82 25706 1180089 2.13 1205795 83 25482 1180616 2.11 1206098 84 25389 1183420 2.10 1208809 85 25382 1180003 2.11 1205385 86 25517 1179870 2.12 1205387 87 25355 1182031 2.10 1207386 88 24972 1175560 2.08 1200532 89 25127 1174393 2.09 1199520 90 25145 1177360 2.09 1202505 91 24852 1174144 2.07 1198996 92 24920 1174239 2.08 1199159 93 24926 1172955 2.08 1197881 94 24764 1171334 2.07 1196098 95 24732 1168462 2.07 1193194 96 24611 1170485 2.06 1195096 97 24253 1166950 2.04 1191203 98 24795 1165385 2.08 1190180 99 24600 1165942 2.07 1190542 100 24111 1160296 2.04 1184407 101 24132 1158263 2.04 1182395 102 24560 1158595 2.08 1183155 103 24027 1153585 2.04 1177612 104 24225 1155799 2.05 1180024 105 23672 1153482 2.01 1177154 106 23586 1149848 2.01 1173434 107 23609 1146511 2.02 1170120 108 23681 1148186 2.02 1171867 109 23663 1142223 2.03 1165886 110 23756 1142423 2.04 1166179 111 23624 1140207 2.03 1163831 112 23491 1140092 2.02 1163583 113 23560 1135651 2.03 1159211 114 23309 1133539 2.01 1156848 115 23162 1129862 2.01 1153024 116 23192 1129459 2.01 1152651 117 23248 1126769 2.02 1150017 118 22912 1124072 2.00 1146984 119 22967 1120711 2.01 1143678 120 22959 1120643 2.01 1143602 121 22914 1113610 2.02 1136524 122 22824 1114222 2.01 1137046 123 22439 1113098 1.98 1135537 124 22377 1107439 1.98 1129816 125 22436 1105351 1.99 1127787 126 22347 1103710 1.98 1126057 127 22253 1097593 1.99 1119846 128 21944 1095651 1.96 1117595 129 21947 1093129 1.97 1115076 130 21933 1085832 1.98 1107765 131 21508 1083667 1.95 1105175 132 21810 1085769 1.97 1107579 133 21814 1078252 1.98 1100066 134 21248 1076342 1.94 1097590 135 21600 1072105 1.97 1093705 136 21614 1065918 1.99 1087532 137 21392 1063669 1.97 1085061 138 21458 1060241 1.98 1081699 139 21087 1056030 1.96 1077117 140 21077 1053418 1.96 1074495 141 20897 1048342 1.95 1069239 142 20847 1043862 1.96 1064709 143 20949 1039882 1.97 1060831 144 20901 1038188 1.97 1059089 145 20589 1034579 1.95 1055168 146 21280 1032883 2.02 1054163 147 21760 1031142 2.07 1052902 148 21632 1023501 2.07 1045133 149 21221 1016097 2.05 1037318 150 20262 1012309 1.96 1032571 151 17467 938198 1.83 955665 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 49106 3622796 1.34 3671902 2 127212 4056836 3.04 4184048 3 166745 4460039 3.60 4626784 4 137849 4351951 3.07 4489800 5 131853 4381113 2.92 4512966 6 134379 4555188 2.87 4689567 7 135545 4531287 2.90 4666832 8 141067 4706770 2.91 4847837 9 138633 4698579 2.87 4837212 10 138610 4657222 2.89 4795832 11 143569 4742573 2.94 4886142 12 137032 4676711 2.85 4813743 13 133907 4513764 2.88 4647671 14 134813 4563900 2.87 4698713 15 134840 4593773 2.85 4728613 16 133353 4625658 2.80 4759011 17 128004 4550448 2.74 4678452 18 126588 4566922 2.70 4693510 19 126664 4562100 2.70 4688764 20 125470 4569125 2.67 4694595 21 124706 4594571 2.64 4719277 22 123670 4586129 2.63 4709799 23 123366 4587977 2.62 4711343 24 122175 4601858 2.59 4724033 25 122152 4591264 2.59 4713416 26 121372 4584271 2.58 4705643 27 121311 4595743 2.57 4717054 28 120075 4584829 2.55 4704904 29 120745 4595606 2.56 4716351 30 120590 4616862 2.55 4737452 31 120221 4611531 2.54 4731752 32 119169 4613174 2.52 4732343 33 119907 4636704 2.52 4756611 34 118571 4621375 2.50 4739946 35 118281 4618493 2.50 4736774 36 117453 4637922 2.47 4755375 37 116473 4623220 2.46 4739693 38 116244 4622609 2.45 4738853 39 116834 4639161 2.46 4755995 40 115897 4633139 2.44 4749036 41 115578 4638760 2.43 4754338 42 114994 4652831 2.41 4767825 43 115240 4646078 2.42 4761318 44 114731 4653206 2.41 4767937 45 114192 4666040 2.39 4780232 46 113777 4653888 2.39 4767665 47 113250 4643912 2.38 4757162 48 112824 4658138 2.36 4770962 49 113377 4647027 2.38 4760404 50 112456 4651356 2.36 4763812 51 111907 4667170 2.34 4779077 52 112275 4655289 2.35 4767564 53 112301 4658344 2.35 4770645 54 111114 4672321 2.32 4783435 55 111492 4668303 2.33 4779795 56 110499 4665228 2.31 4775727 57 110257 4676876 2.30 4787133 58 109815 4665999 2.30 4775814 59 109451 4657809 2.30 4767260 60 108639 4676789 2.27 4785428 61 107952 4660855 2.26 4768807 62 107883 4662459 2.26 4770342 63 107744 4674875 2.25 4782619 64 107218 4666363 2.25 4773581 65 107510 4665933 2.25 4773443 66 107089 4680869 2.24 4787958 67 106895 4669541 2.24 4776436 68 106666 4665900 2.23 4772566 69 105804 4678145 2.21 4783949 70 105801 4665270 2.22 4771071 71 105169 4665702 2.20 4770871 72 105183 4682734 2.20 4787917 73 105111 4661866 2.20 4766977 74 104398 4664519 2.19 4768917 75 104549 4674042 2.19 4778591 76 103584 4665455 2.17 4769039 77 103723 4662351 2.18 4766074 78 102525 4661468 2.15 4763993 79 102482 4646777 2.16 4749259 80 102275 4640454 2.16 4742729 81 102436 4654549 2.15 4756985 82 102825 4643910 2.17 4746735 83 101375 4632469 2.14 4733844 84 101336 4648555 2.13 4749891 85 101126 4637560 2.13 4738686 86 100635 4630058 2.13 4730693 87 100365 4639648 2.12 4740013 88 99650 4625378 2.11 4725028 89 100397 4613974 2.13 4714371 90 99991 4618960 2.12 4718951 91 99604 4612932 2.11 4712536 92 98719 4601809 2.10 4700528 93 99284 4611918 2.11 4711202 94 98640 4595083 2.10 4693723 95 99179 4587456 2.12 4686635 96 97904 4591086 2.09 4688990 97 97380 4575541 2.08 4672921 98 97425 4568308 2.09 4665733 99 97028 4573038 2.08 4670066 100 96474 4561341 2.07 4657815 101 96719 4552004 2.08 4648723 102 96660 4565255 2.07 4661915 103 95339 4548347 2.05 4643686 104 95819 4541391 2.07 4637210 105 95139 4542850 2.05 4637989 106 94971 4521804 2.06 4616775 107 94694 4513916 2.05 4608610 108 94646 4520270 2.05 4614916 109 93974 4499784 2.05 4593758 110 94434 4487557 2.06 4581991 111 94111 4494412 2.05 4588523 112 93368 4479342 2.04 4572710 113 93169 4462363 2.05 4555532 114 92624 4467834 2.03 4560458 115 92043 4452250 2.03 4544293 116 91885 4440323 2.03 4532208 117 91313 4443539 2.01 4534852 118 91668 4426424 2.03 4518092 119 91026 4411665 2.02 4502691 120 91094 4405433 2.03 4496527 121 90309 4389713 2.02 4480022 122 89489 4377345 2.00 4466834 123 89946 4381866 2.01 4471812 124 88866 4357629 2.00 4446495 125 89175 4342038 2.01 4431213 126 89138 4345351 2.01 4434489 127 88727 4324627 2.01 4413354 128 88464 4311883 2.01 4400347 129 87594 4306279 1.99 4393873 130 87641 4291321 2.00 4378962 131 87051 4274753 2.00 4361804 132 87258 4273037 2.00 4360295 133 86813 4249396 2.00 4336209 134 85964 4230464 1.99 4316428 135 85270 4226263 1.98 4311533 136 84979 4207399 1.98 4292378 137 85249 4190492 1.99 4275741 138 84728 4193740 1.98 4278468 139 84208 4167830 1.98 4252038 140 83750 4154883 1.98 4238633 141 83555 4142558 1.98 4226113 142 82829 4121747 1.97 4204576 143 83014 4108109 1.98 4191123 144 82664 4110021 1.97 4192685 145 83306 4085928 2.00 4169234 146 83478 4083148 2.00 4166626 147 84303 4083162 2.02 4167465 148 84489 4072223 2.03 4156712 149 83312 4048886 2.02 4132198 150 80964 4013759 1.98 4094723 151 66194 3772339 1.72 3838533 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 20130 1176660 1.68 1196790 2 45161 620004 6.79 665165 3 74304 452370 14.11 526674 4 101609 565615 15.23 667224 5 103030 590245 14.86 693275 6 102548 568694 15.28 671242 7 105045 572902 15.49 677947 8 104839 553841 15.92 658680 9 113571 585451 16.25 699022 10 111116 545587 16.92 656703 11 111073 561282 16.52 672355 12 119311 570409 17.30 689720 13 113305 535738 17.46 649043 14 109121 531347 17.04 640468 15 109380 529102 17.13 638482 16 110580 522196 17.48 632776 17 113896 531231 17.65 645127 18 112776 521396 17.78 634172 19 113634 523038 17.85 636672 20 113361 522549 17.83 635910 21 114112 522349 17.93 636461 22 115319 523336 18.06 638655 23 113840 517373 18.04 631213 24 113960 516404 18.08 630364 25 114793 518716 18.12 633509 26 113565 513923 18.10 627488 27 113115 508956 18.18 622071 28 114674 511179 18.32 625853 29 113219 507823 18.23 621042 30 113222 504530 18.33 617752 31 113940 508413 18.31 622353 32 112994 503810 18.32 616804 33 112521 500220 18.36 612741 34 113404 500682 18.47 614086 35 112160 497002 18.41 609162 36 111762 492780 18.49 604542 37 112412 495496 18.49 607908 38 111554 494065 18.42 605619 39 110796 488475 18.49 599271 40 111174 490956 18.46 602130 41 110323 485813 18.51 596136 42 109984 483116 18.54 593100 43 110951 485231 18.61 596182 44 109228 480269 18.53 589497 45 109205 476291 18.65 585496 46 109547 476531 18.69 586078 47 109014 471794 18.77 580808 48 107504 468643 18.66 576147 49 107673 469148 18.67 576821 50 107233 464811 18.75 572044 51 106175 462290 18.68 568465 52 106238 461670 18.71 567908 53 105840 458792 18.74 564632 54 105098 455816 18.74 560914 55 104977 455402 18.73 560379 56 104136 450676 18.77 554812 57 103698 447775 18.80 551473 58 103747 446960 18.84 550707 59 102363 444303 18.72 546666 60 101707 440433 18.76 542140 61 101804 441073 18.75 542877 62 100790 435270 18.80 536060 63 100127 431959 18.82 532086 64 99739 433064 18.72 532803 65 100168 429499 18.91 529667 66 98931 424722 18.89 523653 67 98615 424983 18.83 523598 68 97825 419517 18.91 517342 69 97309 417070 18.92 514379 70 97833 417183 19.00 515016 71 96198 413843 18.86 510041 72 95872 410337 18.94 506209 73 96062 409300 19.01 505362 74 94643 406292 18.89 500935 75 93984 402809 18.92 496793 76 94343 401353 19.03 495696 77 92502 398214 18.85 490716 78 92083 395274 18.89 487357 79 91752 393655 18.90 485407 80 91384 390045 18.98 481429 81 90625 386475 18.99 477100 82 90304 386608 18.94 476912 83 89647 382820 18.97 472467 84 88796 378855 18.99 467651 85 88728 378445 18.99 467173 86 88552 375720 19.07 464272 87 87554 372439 19.03 459993 88 86813 371298 18.95 458111 89 86155 367162 19.01 453317 90 85583 363597 19.05 449180 91 84970 363915 18.93 448885 92 84789 359359 19.09 444148 93 84090 355605 19.12 439695 94 83344 355118 19.01 438462 95 82969 353423 19.01 436392 96 81933 349221 19.00 431154 97 81956 346397 19.13 428353 98 81130 344577 19.06 425707 99 80688 340959 19.14 421647 100 80214 340959 19.05 421173 101 79176 337064 19.02 416240 102 78622 334799 19.02 413421 103 77970 332599 18.99 410569 104 77336 328640 19.05 405976 105 76910 325782 19.10 402692 106 76451 324967 19.05 401418 107 75797 321901 19.06 397698 108 74781 318331 19.02 393112 109 74295 317512 18.96 391807 110 73818 313345 19.07 387163 111 73111 311898 18.99 385009 112 72882 310002 19.04 382884 113 71992 306685 19.01 378677 114 71415 304191 19.01 375606 115 71617 302005 19.17 373622 116 70906 300568 19.09 371474 117 69555 296722 18.99 366277 118 69521 295601 19.04 365122 119 68445 292115 18.98 360560 120 68090 288671 19.09 356761 121 67876 288248 19.06 356124 122 67103 285552 19.03 352655 123 66372 281803 19.06 348175 124 65687 280415 18.98 346102 125 65420 278343 19.03 343763 126 64559 275863 18.96 340422 127 64470 274213 19.04 338683 128 64128 270943 19.14 335071 129 63087 268852 19.01 331939 130 62521 267006 18.97 329527 131 62094 263759 19.06 325853 132 61303 261985 18.96 323288 133 60969 260718 18.95 321687 134 59949 257019 18.91 316968 135 59657 254365 19.00 314022 136 59129 253339 18.92 312468 137 58944 251421 18.99 310365 138 58186 248270 18.99 306456 139 57515 246729 18.90 304244 140 57092 243999 18.96 301091 141 56423 241290 18.95 297713 142 55995 239847 18.93 295842 143 55443 237878 18.90 293321 144 54406 234868 18.81 289274 145 54065 233463 18.80 287528 146 53436 230807 18.80 284243 147 53080 227959 18.89 281039 148 52528 225500 18.89 278028 149 51694 220893 18.96 272587 150 50137 192730 20.64 242867 151 41811 0 100.00 41811 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 11456 862914 1.31 874370 2 34131 1339322 2.49 1373453 3 26107 874546 2.90 900653 4 30753 801780 3.69 832533 5 24576 973823 2.46 998399 6 23526 958872 2.39 982398 7 22815 902476 2.47 925291 8 23442 913914 2.50 937356 9 23642 936324 2.46 959966 10 23155 896022 2.52 919177 11 21513 880582 2.38 902095 12 22493 904237 2.43 926730 13 22078 891429 2.42 913507 14 22173 893804 2.42 915977 15 20983 857369 2.39 878352 16 20501 855459 2.34 875960 17 20815 867399 2.34 888214 18 21380 879310 2.37 900690 19 20847 855911 2.38 876758 20 20858 855335 2.38 876193 21 20719 858325 2.36 879044 22 20846 856408 2.38 877254 23 20503 855765 2.34 876268 24 20584 854057 2.35 874641 25 20411 852473 2.34 872884 26 20397 853063 2.34 873460 27 20340 849610 2.34 869950 28 20089 843217 2.33 863306 29 20236 843820 2.34 864056 30 20501 841667 2.38 862168 31 19808 834955 2.32 854763 32 20026 835478 2.34 855504 33 19827 834906 2.32 854733 34 19602 827691 2.31 847293 35 19691 827304 2.32 846995 36 19509 826925 2.30 846434 37 19273 820171 2.30 839444 38 19272 822740 2.29 842012 39 19176 817466 2.29 836642 40 18814 810705 2.27 829519 41 18705 812603 2.25 831308 42 18832 804466 2.29 823298 43 18785 801019 2.29 819804 44 18549 802615 2.26 821164 45 18336 795854 2.25 814190 46 18032 790483 2.23 808515 47 18058 792968 2.23 811026 48 17922 786697 2.23 804619 49 17494 781368 2.19 798862 50 17629 778976 2.21 796605 51 17350 773763 2.19 791113 52 17153 770628 2.18 787781 53 16944 766100 2.16 783044 54 16836 762950 2.16 779786 55 16618 755749 2.15 772367 56 16745 755605 2.17 772350 57 16510 751039 2.15 767549 58 16192 747412 2.12 763604 59 16412 741984 2.16 758396 60 15886 739662 2.10 755548 61 15772 731906 2.11 747678 62 15836 730719 2.12 746555 63 15762 726924 2.12 742686 64 15530 719182 2.11 734712 65 15192 717815 2.07 733007 66 15381 713108 2.11 728489 67 14972 709157 2.07 724129 68 14987 707499 2.07 722486 69 14862 701731 2.07 716593 70 14480 697056 2.04 711536 71 14702 694589 2.07 709291 72 14277 689371 2.03 703648 73 14128 683821 2.02 697949 74 14082 682351 2.02 696433 75 13661 679042 1.97 692703 76 13705 672540 2.00 686245 77 13592 670098 1.99 683690 78 13686 667213 2.01 680899 79 13476 660847 2.00 674323 80 13245 657715 1.97 670960 81 13046 653445 1.96 666491 82 12924 649030 1.95 661954 83 12939 645095 1.97 658034 84 12777 640235 1.96 653012 85 12508 633781 1.94 646289 86 12564 633342 1.95 645906 87 12172 627011 1.90 639183 88 12076 624306 1.90 636382 89 12261 621748 1.93 634009 90 11901 616381 1.89 628282 91 11880 611283 1.91 623163 92 11689 608044 1.89 619733 93 11716 602923 1.91 614639 94 11332 596763 1.86 608095 95 11322 594508 1.87 605830 96 11201 591618 1.86 602819 97 10998 585359 1.84 596357 98 10945 581477 1.85 592422 99 10982 578419 1.86 589401 100 10707 571817 1.84 582524 101 10657 570106 1.83 580763 102 10570 565007 1.84 575577 103 10385 560904 1.82 571289 104 10501 554624 1.86 565125 105 10078 550906 1.80 560984 106 9933 545446 1.79 555379 107 10004 544172 1.81 554176 108 9888 538619 1.80 548507 109 9932 533012 1.83 542944 110 9605 530580 1.78 540185 111 9397 526369 1.75 535766 112 9335 521954 1.76 531289 113 9475 517429 1.80 526904 114 9235 515262 1.76 524497 115 9095 509459 1.75 518554 116 8967 505164 1.74 514131 117 9000 501258 1.76 510258 118 8853 497108 1.75 505961 119 8745 493578 1.74 502323 120 8527 490260 1.71 498787 121 8387 486099 1.70 494486 122 8320 482910 1.69 491230 123 8252 476980 1.70 485232 124 8334 473744 1.73 482078 125 8214 469993 1.72 478207 126 8058 464189 1.71 472247 127 7955 460759 1.70 468714 128 7995 458880 1.71 466875 129 7851 454406 1.70 462257 130 7748 451213 1.69 458961 131 7651 444486 1.69 452137 132 7593 441779 1.69 449372 133 7410 438015 1.66 445425 134 7454 435082 1.68 442536 135 7316 430398 1.67 437714 136 7229 427120 1.66 434349 137 7140 422815 1.66 429955 138 7216 419586 1.69 426802 139 7021 415334 1.66 422355 140 6934 412705 1.65 419639 141 6866 405760 1.66 412626 142 6803 403938 1.66 410741 143 6786 401221 1.66 408007 144 6638 395881 1.65 402519 145 6522 391800 1.64 398322 146 6567 389171 1.66 395738 147 6439 383974 1.65 390413 148 6352 380238 1.64 386590 149 6264 372087 1.66 378351 150 5608 333744 1.65 339352 151 2554 0 100.00 2554 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 49159 3841868 1.26 3891027 2 92521 3723801 2.42 3816322 3 107382 3744151 2.79 3851533 4 112794 4031044 2.72 4143838 5 101469 4026864 2.46 4128333 6 99173 4017354 2.41 4116527 7 101221 3946322 2.50 4047543 8 98112 3825918 2.50 3924030 9 98262 3874893 2.47 3973155 10 92930 3638386 2.49 3731316 11 88675 3637570 2.38 3726245 12 89669 3615289 2.42 3704958 13 88529 3505196 2.46 3593725 14 89062 3560693 2.44 3649755 15 89490 3531829 2.47 3621319 16 85768 3468444 2.41 3554212 17 85759 3482852 2.40 3568611 18 86289 3493967 2.41 3580256 19 87124 3513469 2.42 3600593 20 86239 3498447 2.41 3584686 21 86573 3487238 2.42 3573811 22 86107 3486643 2.41 3572750 23 86059 3466024 2.42 3552083 24 85304 3448544 2.41 3533848 25 84947 3450088 2.40 3535035 26 84999 3430170 2.42 3515169 27 85101 3422485 2.43 3507586 28 84736 3418942 2.42 3503678 29 84293 3406169 2.41 3490462 30 83817 3393070 2.41 3476887 31 83596 3385993 2.41 3469589 32 83310 3364606 2.42 3447916 33 82793 3351858 2.41 3434651 34 82447 3341917 2.41 3424364 35 81823 3318926 2.41 3400749 36 80998 3303335 2.39 3384333 37 80737 3303729 2.39 3384466 38 79659 3286121 2.37 3365780 39 79193 3272451 2.36 3351644 40 79327 3262989 2.37 3342316 41 77875 3235638 2.35 3313513 42 77482 3227509 2.34 3304991 43 77134 3209640 2.35 3286774 44 76101 3188467 2.33 3264568 45 74877 3169730 2.31 3244607 46 74065 3159553 2.29 3233618 47 73900 3140930 2.30 3214830 48 73261 3124502 2.29 3197763 49 73068 3121692 2.29 3194760 50 72450 3099335 2.28 3171785 51 71438 3076624 2.27 3148062 52 70926 3070061 2.26 3140987 53 69852 3049906 2.24 3119758 54 68988 3032147 2.22 3101135 55 68265 3021862 2.21 3090127 56 67894 2998327 2.21 3066221 57 67160 2977736 2.21 3044896 58 66588 2971468 2.19 3038056 59 65644 2943645 2.18 3009289 60 64897 2926158 2.17 2991055 61 64525 2917697 2.16 2982222 62 63757 2893204 2.16 2956961 63 62683 2880001 2.13 2942684 64 62674 2862295 2.14 2924969 65 61632 2841299 2.12 2902931 66 60926 2829528 2.11 2890454 67 61288 2811836 2.13 2873124 68 60014 2795000 2.10 2855014 69 59294 2778263 2.09 2837557 70 59364 2761091 2.10 2820455 71 58017 2742953 2.07 2800970 72 57637 2722172 2.07 2779809 73 57184 2707805 2.07 2764989 74 56401 2692294 2.05 2748695 75 55665 2671134 2.04 2726799 76 55225 2654682 2.04 2709907 77 54876 2636158 2.04 2691034 78 54188 2617585 2.03 2671773 79 53466 2606737 2.01 2660203 80 53044 2594842 2.00 2647886 81 52040 2574566 1.98 2626606 82 51984 2562274 1.99 2614258 83 51714 2544297 1.99 2596011 84 50460 2523103 1.96 2573563 85 50168 2512305 1.96 2562473 86 49629 2488028 1.96 2537657 87 49207 2472421 1.95 2521628 88 48587 2457442 1.94 2506029 89 47828 2442060 1.92 2489888 90 47590 2421845 1.93 2469435 91 47036 2413211 1.91 2460247 92 46308 2391783 1.90 2438091 93 45982 2375044 1.90 2421026 94 45552 2361732 1.89 2407284 95 45056 2344514 1.89 2389570 96 44472 2327144 1.88 2371616 97 44009 2314837 1.87 2358846 98 43231 2296255 1.85 2339486 99 42920 2277772 1.85 2320692 100 42332 2263596 1.84 2305928 101 41819 2244471 1.83 2286290 102 41194 2230464 1.81 2271658 103 41231 2216325 1.83 2257556 104 40927 2194832 1.83 2235759 105 40010 2179951 1.80 2219961 106 39532 2165026 1.79 2204558 107 38999 2147325 1.78 2186324 108 39086 2130241 1.80 2169327 109 38192 2116341 1.77 2154533 110 38102 2099986 1.78 2138088 111 37363 2085253 1.76 2122616 112 37354 2070562 1.77 2107916 113 36314 2052092 1.74 2088406 114 36256 2037422 1.75 2073678 115 35710 2022718 1.73 2058428 116 35601 2005399 1.74 2041000 117 34984 1988375 1.73 2023359 118 34896 1974868 1.74 2009764 119 34262 1955883 1.72 1990145 120 34306 1940542 1.74 1974848 121 33477 1925916 1.71 1959393 122 32868 1906817 1.69 1939685 123 32622 1893032 1.69 1925654 124 32313 1878830 1.69 1911143 125 31877 1862700 1.68 1894577 126 31765 1849140 1.69 1880905 127 31216 1837566 1.67 1868782 128 31232 1818503 1.69 1849735 129 30636 1802238 1.67 1832874 130 30341 1791282 1.67 1821623 131 30079 1772340 1.67 1802419 132 29461 1755544 1.65 1785005 133 29304 1742898 1.65 1772202 134 28901 1725353 1.65 1754254 135 28563 1713027 1.64 1741590 136 28346 1702496 1.64 1730842 137 28171 1683385 1.65 1711556 138 27722 1670130 1.63 1697852 139 27631 1659383 1.64 1687014 140 27179 1639770 1.63 1666949 141 26636 1625691 1.61 1652327 142 26444 1612522 1.61 1638966 143 25772 1596187 1.59 1621959 144 25786 1578925 1.61 1604711 145 25727 1567395 1.61 1593122 146 25167 1549879 1.60 1575046 147 25056 1535836 1.61 1560892 148 24738 1516629 1.60 1541367 149 24089 1488185 1.59 1512274 150 22211 1337770 1.63 1359981 151 8256 0 100.00 8256