CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 132549 382752 25.72 515301 2 114875 429249 21.11 544124 3 160970 553544 22.53 714514 4 161554 544543 22.88 706097 5 155362 529137 22.70 684499 6 153909 543853 22.06 697762 7 163584 527935 23.66 691519 8 172020 592433 22.50 764453 9 153339 537808 22.19 691147 10 157554 566993 21.75 724547 11 174110 583905 22.97 758015 12 156699 539797 22.50 696496 13 151639 543594 21.81 695233 14 151111 536244 21.98 687355 15 153825 527836 22.57 681661 16 160819 543651 22.83 704470 17 156629 532278 22.74 688907 18 159097 542082 22.69 701179 19 158547 545445 22.52 703992 20 160708 546148 22.74 706856 21 162572 555998 22.62 718570 22 159079 547060 22.53 706139 23 160855 553036 22.53 713891 24 163218 552408 22.81 715626 25 161182 546158 22.79 707340 26 160355 545241 22.73 705596 27 163749 554726 22.79 718475 28 162258 556198 22.58 718456 29 163676 557232 22.70 720908 30 166378 568639 22.64 735017 31 165793 566888 22.63 732681 32 165693 567536 22.60 733229 33 167330 571000 22.66 738330 34 167193 565722 22.81 732915 35 165998 562990 22.77 728988 36 169312 570689 22.88 740001 37 168536 569059 22.85 737595 38 168156 570934 22.75 739090 39 169849 577090 22.74 746939 40 170361 577522 22.78 747883 41 170176 578585 22.73 748761 42 172977 588256 22.72 761233 43 170838 583305 22.65 754143 44 173367 583661 22.90 757028 45 174735 585708 22.98 760443 46 174028 583286 22.98 757314 47 172950 582904 22.88 755854 48 174145 590091 22.79 764236 49 173760 587775 22.82 761535 50 174452 589311 22.84 763763 51 176761 599265 22.78 776026 52 175703 595356 22.79 771059 53 176797 598353 22.81 775150 54 179622 602032 22.98 781654 55 178764 597581 23.03 776345 56 177116 595515 22.92 772631 57 179633 603275 22.94 782908 58 178533 599825 22.94 778358 59 177986 598929 22.91 776915 60 180647 609305 22.87 789952 61 179781 603860 22.94 783641 62 179662 604045 22.92 783707 63 181844 610400 22.95 792244 64 180709 609620 22.87 790329 65 181197 608018 22.96 789215 66 181803 612038 22.90 793841 67 182681 606047 23.16 788728 68 182834 609475 23.08 792309 69 183549 613770 23.02 797319 70 181449 611633 22.88 793082 71 183042 612582 23.01 795624 72 185056 617351 23.06 802407 73 182870 613559 22.96 796429 74 182669 613731 22.94 796400 75 184247 614479 23.07 798726 76 183597 611821 23.08 795418 77 183550 611422 23.09 794972 78 184900 617812 23.03 802712 79 184868 616880 23.06 801748 80 183497 616609 22.93 800106 81 184585 620110 22.94 804695 82 183655 615555 22.98 799210 83 184031 616053 23.00 800084 84 184024 620732 22.87 804756 85 183849 615485 23.00 799334 86 184059 615872 23.01 799931 87 184176 618632 22.94 802808 88 183228 613773 22.99 797001 89 182960 614203 22.95 797163 90 183660 620204 22.85 803864 91 183570 614828 22.99 798398 92 182226 611757 22.95 793983 93 182909 616097 22.89 799006 94 183209 614360 22.97 797569 95 181382 611366 22.88 792748 96 182658 612649 22.97 795307 97 181952 607872 23.04 789824 98 180225 605893 22.93 786118 99 181785 610168 22.95 791953 100 180043 606628 22.89 786671 101 179513 605429 22.87 784942 102 180134 608683 22.84 788817 103 178558 603596 22.83 782154 104 178322 603124 22.82 781446 105 178402 605268 22.76 783670 106 177063 596860 22.88 773923 107 176204 594412 22.87 770616 108 176331 597544 22.79 773875 109 175311 593895 22.79 769206 110 173395 589418 22.73 762813 111 174577 596302 22.65 770879 112 174228 592073 22.74 766301 113 172428 589156 22.64 761584 114 173434 590829 22.69 764263 115 172295 586631 22.70 758926 116 171686 585277 22.68 756963 117 171884 586328 22.67 758212 118 170211 579390 22.71 749601 119 168441 576591 22.61 745032 120 168798 580398 22.53 749196 121 167675 576766 22.52 744441 122 167479 571713 22.66 739192 123 166802 576712 22.43 743514 124 166008 571541 22.51 737549 125 165228 570683 22.45 735911 126 164358 572071 22.32 736429 127 164075 567396 22.43 731471 128 162215 565305 22.30 727520 129 162676 566051 22.32 728727 130 160730 558710 22.34 719440 131 159867 557086 22.30 716953 132 159645 558486 22.23 718131 133 158060 552737 22.24 710797 134 158486 550162 22.36 708648 135 157005 553493 22.10 710498 136 156528 550242 22.15 706770 137 154962 547542 22.06 702504 138 154627 547289 22.03 701916 139 153630 542005 22.08 695635 140 152217 538539 22.04 690756 141 151687 538872 21.97 690559 142 150251 531823 22.03 682074 143 149258 529140 22.00 678398 144 148054 531472 21.79 679526 145 147271 527158 21.84 674429 146 146402 524872 21.81 671274 147 147481 531011 21.74 678492 148 145457 524415 21.71 669872 149 142271 520419 21.47 662690 150 138369 516824 21.12 655193 151 124751 460813 21.30 585564 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 13185 710879 1.82 724064 2 47890 811162 5.57 859052 3 52730 997389 5.02 1050119 4 47762 935670 4.86 983432 5 48384 873399 5.25 921783 6 49847 914338 5.17 964185 7 55589 973094 5.40 1028683 8 52067 910406 5.41 962473 9 50097 915894 5.19 965991 10 52476 939375 5.29 991851 11 52943 937251 5.35 990194 12 51237 939105 5.17 990342 13 49492 896087 5.23 945579 14 48888 890247 5.21 939135 15 50810 922432 5.22 973242 16 49864 924926 5.12 974790 17 47629 898813 5.03 946442 18 48356 903501 5.08 951857 19 48842 908558 5.10 957400 20 48909 913114 5.08 962023 21 48522 915010 5.04 963532 22 48897 920930 5.04 969827 23 48824 930191 4.99 979015 24 48218 930322 4.93 978540 25 47762 932378 4.87 980140 26 48035 933492 4.89 981527 27 48076 933191 4.90 981267 28 47349 931561 4.84 978910 29 47990 931867 4.90 979857 30 48365 940103 4.89 988468 31 48546 946638 4.88 995184 32 48889 946395 4.91 995284 33 48604 953517 4.85 1002121 34 48215 961394 4.78 1009609 35 48416 966636 4.77 1015052 36 47996 971864 4.71 1019860 37 47909 960612 4.75 1008521 38 47657 962218 4.72 1009875 39 48176 966047 4.75 1014223 40 48246 966674 4.75 1014920 41 48380 968757 4.76 1017137 42 48187 973972 4.71 1022159 43 47954 979287 4.67 1027241 44 48306 982456 4.69 1030762 45 48161 996045 4.61 1044206 46 47497 993666 4.56 1041163 47 48299 995211 4.63 1043510 48 47111 988883 4.55 1035994 49 47319 986237 4.58 1033556 50 47700 992245 4.59 1039945 51 47551 989773 4.58 1037324 52 47840 995490 4.59 1043330 53 47713 996705 4.57 1044418 54 48097 1008153 4.55 1056250 55 47747 1012898 4.50 1060645 56 47902 1016139 4.50 1064041 57 46822 1013614 4.42 1060436 58 46737 1008696 4.43 1055433 59 47204 1004007 4.49 1051211 60 47011 1005767 4.47 1052778 61 46741 1010110 4.42 1056851 62 47217 1008942 4.47 1056159 63 46664 1019089 4.38 1065753 64 46946 1018604 4.41 1065550 65 46750 1024849 4.36 1071599 66 46203 1029944 4.29 1076147 67 46715 1033591 4.32 1080306 68 46223 1026094 4.31 1072317 69 46005 1022461 4.31 1068466 70 45941 1023801 4.29 1069742 71 46257 1020616 4.34 1066873 72 46195 1024259 4.32 1070454 73 45944 1028336 4.28 1074280 74 46047 1026732 4.29 1072779 75 46264 1036748 4.27 1083012 76 45673 1044342 4.19 1090015 77 45406 1042259 4.17 1087665 78 45406 1042799 4.17 1088205 79 45453 1034519 4.21 1079972 80 45248 1033282 4.20 1078530 81 45738 1031631 4.25 1077369 82 45554 1030684 4.23 1076238 83 45406 1029462 4.22 1074868 84 45101 1034491 4.18 1079592 85 44526 1037427 4.12 1081953 86 45036 1040141 4.15 1085177 87 45098 1043944 4.14 1089042 88 44921 1035546 4.16 1080467 89 44654 1035565 4.13 1080219 90 44828 1033036 4.16 1077864 91 44003 1029694 4.10 1073697 92 44039 1025765 4.12 1069804 93 44093 1029587 4.11 1073680 94 43725 1027161 4.08 1070886 95 43828 1021496 4.11 1065324 96 43731 1024586 4.09 1068317 97 43219 1028005 4.03 1071224 98 43525 1025386 4.07 1068911 99 43153 1021376 4.05 1064529 100 42764 1015690 4.04 1058454 101 42731 1015191 4.04 1057922 102 43062 1011405 4.08 1054467 103 42045 1009510 4.00 1051555 104 42336 1008992 4.03 1051328 105 42554 1010310 4.04 1052864 106 42074 1003479 4.02 1045553 107 41488 1002700 3.97 1044188 108 41822 1002963 4.00 1044785 109 41288 997894 3.97 1039182 110 41528 997636 4.00 1039164 111 41264 995306 3.98 1036570 112 41063 994611 3.96 1035674 113 40671 989591 3.95 1030262 114 40766 988294 3.96 1029060 115 40521 983506 3.96 1024027 116 40277 980708 3.94 1020985 117 40338 979322 3.96 1019660 118 40205 976640 3.95 1016845 119 40161 973319 3.96 1013480 120 39532 973269 3.90 1012801 121 39574 967571 3.93 1007145 122 39486 970000 3.91 1009486 123 39210 965856 3.90 1005066 124 38912 965137 3.88 1004049 125 38552 958489 3.87 997041 126 38565 954591 3.88 993156 127 38434 951267 3.88 989701 128 38353 943970 3.90 982323 129 37851 941639 3.86 979490 130 38046 938110 3.90 976156 131 37566 936610 3.86 974176 132 37895 937547 3.88 975442 133 37151 932571 3.83 969722 134 37425 926437 3.88 963862 135 36299 924640 3.78 960939 136 36525 917115 3.83 953640 137 36603 911301 3.86 947904 138 36599 909755 3.87 946354 139 36368 904591 3.86 940959 140 35677 900816 3.81 936493 141 35694 895896 3.83 931590 142 35042 895087 3.77 930129 143 35317 890886 3.81 926203 144 35327 886055 3.83 921382 145 35348 884112 3.84 919460 146 35803 882635 3.90 918438 147 35999 881942 3.92 917941 148 35955 872369 3.96 908324 149 35362 866488 3.92 901850 150 33964 858724 3.80 892688 151 28764 790396 3.51 819160 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 74340 3059769 2.37 3134109 2 211536 3158925 6.28 3370461 3 284203 3536932 7.44 3821135 4 217427 3316853 6.15 3534280 5 205603 3274772 5.91 3480375 6 215112 3437528 5.89 3652640 7 220042 3473731 5.96 3693773 8 235444 3685290 6.01 3920734 9 227859 3684764 5.82 3912623 10 224342 3627742 5.82 3852084 11 247255 3787681 6.13 4034936 12 224578 3656815 5.79 3881393 13 219052 3509729 5.87 3728781 14 219476 3548588 5.82 3768064 15 217828 3559796 5.77 3777624 16 212096 3573039 5.60 3785135 17 199860 3471006 5.44 3670866 18 202469 3492694 5.48 3695163 19 202428 3511603 5.45 3714031 20 202966 3527018 5.44 3729984 21 202828 3570616 5.38 3773444 22 200742 3577977 5.31 3778719 23 198849 3570851 5.27 3769700 24 196682 3580301 5.21 3776983 25 194901 3560045 5.19 3754946 26 192811 3527275 5.18 3720086 27 192507 3542504 5.15 3735011 28 190937 3534543 5.13 3725480 29 192360 3550753 5.14 3743113 30 194340 3594773 5.13 3789113 31 195910 3609771 5.15 3805681 32 195480 3615265 5.13 3810745 33 195910 3649259 5.09 3845169 34 192676 3628374 5.04 3821050 35 191461 3607533 5.04 3798994 36 189397 3615716 4.98 3805113 37 187491 3595700 4.96 3783191 38 187835 3586440 4.98 3774275 39 190594 3618645 5.00 3809239 40 189973 3628343 4.98 3818316 41 190528 3646182 4.97 3836710 42 191592 3679764 4.95 3871356 43 190151 3670638 4.93 3860789 44 189411 3675961 4.90 3865372 45 188363 3687356 4.86 3875719 46 185636 3660521 4.83 3846157 47 185249 3634064 4.85 3819313 48 184228 3643836 4.81 3828064 49 185352 3636091 4.85 3821443 50 186386 3654034 4.85 3840420 51 186975 3686289 4.83 3873264 52 185821 3679393 4.81 3865214 53 186834 3683162 4.83 3869996 54 185015 3707934 4.75 3892949 55 183884 3703841 4.73 3887725 56 182512 3690867 4.71 3873379 57 181747 3697227 4.69 3878974 58 180925 3682250 4.68 3863175 59 180229 3671030 4.68 3851259 60 181355 3703664 4.67 3885019 61 180698 3700599 4.66 3881297 62 180666 3705904 4.65 3886570 63 181549 3718206 4.66 3899755 64 179408 3717649 4.60 3897057 65 178964 3710743 4.60 3889707 66 178493 3728588 4.57 3907081 67 177440 3719394 4.55 3896834 68 177107 3703730 4.56 3880837 69 177018 3719508 4.54 3896526 70 177073 3709263 4.56 3886336 71 176649 3722038 4.53 3898687 72 177758 3747059 4.53 3924817 73 175922 3733912 4.50 3909834 74 176128 3722159 4.52 3898287 75 175169 3737118 4.48 3912287 76 174396 3720215 4.48 3894611 77 173580 3716516 4.46 3890096 78 171880 3715091 4.42 3886971 79 171764 3702064 4.43 3873828 80 171397 3695074 4.43 3866471 81 173456 3714216 4.46 3887672 82 172398 3718390 4.43 3890788 83 171305 3708628 4.42 3879933 84 170363 3721418 4.38 3891781 85 169844 3706163 4.38 3876007 86 169592 3700726 4.38 3870318 87 168029 3699578 4.34 3867607 88 165845 3679723 4.31 3845568 89 167047 3663095 4.36 3830142 90 166903 3685303 4.33 3852206 91 166967 3686063 4.33 3853030 92 166643 3676466 4.34 3843109 93 166296 3692214 4.31 3858510 94 165159 3677556 4.30 3842715 95 165490 3660948 4.32 3826438 96 164030 3668101 4.28 3832131 97 162660 3649983 4.27 3812643 98 162746 3634234 4.29 3796980 99 161862 3640967 4.26 3802829 100 160774 3630214 4.24 3790988 101 160120 3621901 4.23 3782021 102 162308 3654052 4.25 3816360 103 161024 3637890 4.24 3798914 104 160817 3634829 4.24 3795646 105 159331 3634203 4.20 3793534 106 158026 3613303 4.19 3771329 107 157434 3598838 4.19 3756272 108 156537 3598057 4.17 3754594 109 156332 3582593 4.18 3738925 110 156118 3567012 4.19 3723130 111 156074 3573113 4.19 3729187 112 154964 3569726 4.16 3724690 113 153794 3556356 4.15 3710150 114 154071 3558525 4.15 3712596 115 153347 3548157 4.14 3701504 116 153701 3534139 4.17 3687840 117 152836 3544573 4.13 3697409 118 151456 3526171 4.12 3677627 119 151671 3510716 4.14 3662387 120 150066 3501340 4.11 3651406 121 149332 3486482 4.11 3635814 122 148795 3474247 4.11 3623042 123 148336 3479851 4.09 3628187 124 146762 3459640 4.07 3606402 125 146775 3439876 4.09 3586651 126 147062 3445346 4.09 3592408 127 146037 3428351 4.09 3574388 128 145852 3418517 4.09 3564369 129 145350 3414384 4.08 3559734 130 143515 3405572 4.04 3549087 131 143750 3381826 4.08 3525576 132 143226 3385914 4.06 3529140 133 141030 3367394 4.02 3508424 134 140842 3344399 4.04 3485241 135 140079 3333775 4.03 3473854 136 138990 3321339 4.02 3460329 137 138984 3308048 4.03 3447032 138 139751 3312471 4.05 3452222 139 138151 3293633 4.03 3431784 140 138045 3276798 4.04 3414843 141 136276 3271856 4.00 3408132 142 135160 3250303 3.99 3385463 143 134365 3228973 3.99 3363338 144 134210 3223931 4.00 3358141 145 133502 3210108 3.99 3343610 146 134310 3203488 4.02 3337798 147 136034 3213893 4.06 3349927 148 135308 3208423 4.05 3343731 149 133543 3182039 4.03 3315582 150 129609 3155074 3.95 3284683 151 104942 2948593 3.44 3053535 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 29872 935515 3.09 965387 2 43851 528385 7.66 572236 3 58261 373035 13.51 431296 4 84307 474821 15.08 559128 5 81538 486933 14.34 568471 6 80147 463802 14.73 543949 7 83022 465369 15.14 548391 8 85208 459850 15.63 545058 9 99904 497168 16.73 597072 10 98586 435255 18.47 533841 11 101371 457027 18.15 558398 12 112779 470281 19.34 583060 13 102972 427451 19.41 530423 14 99792 428403 18.89 528195 15 99886 418486 19.27 518372 16 101029 410364 19.76 511393 17 106542 422870 20.12 529412 18 104360 410420 20.27 514780 19 105673 414131 20.33 519804 20 106311 415276 20.38 521587 21 107239 412734 20.62 519973 22 109014 417038 20.72 526052 23 107247 409371 20.76 516618 24 107308 410514 20.72 517822 25 108389 407730 21.00 516119 26 107569 404141 21.02 511710 27 106787 397287 21.18 504074 28 107481 402872 21.06 510353 29 107140 402197 21.04 509337 30 107612 401357 21.14 508969 31 109091 405293 21.21 514384 32 108699 403963 21.20 512662 33 107387 397173 21.28 504560 34 108607 398923 21.40 507530 35 107902 394214 21.49 502116 36 106840 389325 21.53 496165 37 108329 389868 21.74 498197 38 106845 389178 21.54 496023 39 106305 387382 21.53 493687 40 106426 389788 21.45 496214 41 106702 385947 21.66 492649 42 105736 384389 21.57 490125 43 106833 386843 21.64 493676 44 106274 381725 21.78 487999 45 106450 377769 21.98 484219 46 105585 377659 21.85 483244 47 104977 375233 21.86 480210 48 103955 371583 21.86 475538 49 103239 371368 21.75 474607 50 103590 370300 21.86 473890 51 102613 368782 21.77 471395 52 103517 369433 21.89 472950 53 102752 366929 21.88 469681 54 102271 364743 21.90 467014 55 102813 362868 22.08 465681 56 102757 359648 22.22 462405 57 101156 355701 22.14 456857 58 101091 356618 22.09 457709 59 100188 354291 22.04 454479 60 99463 349932 22.13 449395 61 99844 352940 22.05 452784 62 99562 349605 22.17 449167 63 98060 346393 22.06 444453 64 98526 346337 22.15 444863 65 97925 344427 22.14 442352 66 97980 340089 22.37 438069 67 97583 340612 22.27 438195 68 96906 336109 22.38 433015 69 96643 334357 22.42 431000 70 96413 333975 22.40 430388 71 95004 333354 22.18 428358 72 94122 330184 22.18 424306 73 94749 332005 22.20 426754 74 94395 328285 22.33 422680 75 93025 323654 22.33 416679 76 93384 321210 22.52 414594 77 92419 318620 22.48 411039 78 91940 315757 22.55 407697 79 91911 318010 22.42 409921 80 90885 314305 22.43 405190 81 90015 312801 22.35 402816 82 90128 312827 22.37 402955 83 89377 308644 22.46 398021 84 88307 306174 22.39 394481 85 88504 305922 22.44 394426 86 87656 301742 22.51 389398 87 87198 297775 22.65 384973 88 86660 298028 22.53 384688 89 86252 294872 22.63 381124 90 84926 293130 22.46 378056 91 84743 292808 22.45 377551 92 84372 290773 22.49 375145 93 83666 286219 22.62 369885 94 82990 284918 22.56 367908 95 83167 282415 22.75 365582 96 81643 279891 22.58 361534 97 81264 279128 22.55 360392 98 80473 276130 22.57 356603 99 79494 272522 22.58 352016 100 80192 271704 22.79 351896 101 78726 269376 22.62 348102 102 78207 266937 22.66 345144 103 77657 265749 22.61 343406 104 77563 262665 22.80 340228 105 76053 259637 22.66 335690 106 75938 259389 22.65 335327 107 74835 255102 22.68 329937 108 73922 252642 22.64 326564 109 73701 251852 22.64 325553 110 72607 248001 22.65 320608 111 72236 245150 22.76 317386 112 71369 245503 22.52 316872 113 71108 242630 22.66 313738 114 70461 239104 22.76 309565 115 70081 239689 22.62 309770 116 69346 236220 22.69 305566 117 68475 233331 22.69 301806 118 67984 231530 22.70 299514 119 67306 228669 22.74 295975 120 66222 227038 22.58 293260 121 66322 226276 22.67 292598 122 65199 225101 22.46 290300 123 64639 221350 22.60 285989 124 64248 220141 22.59 284389 125 63451 217067 22.62 280518 126 63095 216064 22.60 279159 127 62636 213642 22.67 276278 128 62540 212951 22.70 275491 129 61250 209218 22.65 270468 130 61088 208227 22.68 269315 131 60167 204785 22.71 264952 132 59314 202394 22.66 261708 133 58895 202721 22.51 261616 134 57404 199275 22.36 256679 135 57266 197215 22.50 254481 136 57025 196844 22.46 253869 137 57043 194492 22.68 251535 138 55611 192478 22.42 248089 139 54995 191408 22.32 246403 140 55176 188939 22.60 244115 141 53831 185749 22.47 239580 142 53880 184985 22.56 238865 143 52353 182712 22.27 235065 144 51980 179822 22.42 231802 145 52006 179759 22.44 231765 146 51522 177662 22.48 229184 147 50622 174673 22.47 225295 148 49997 174003 22.32 224000 149 49376 168839 22.63 218215 150 47458 146085 24.52 193543 151 39862 0 100.00 39862 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 19935 713359 2.72 733294 2 57397 1093877 4.99 1151274 3 38528 700223 5.22 738751 4 42148 629806 6.27 671954 5 37660 804740 4.47 842400 6 35996 777658 4.42 813654 7 33830 700840 4.60 734670 8 34635 721577 4.58 756212 9 36985 767880 4.60 804865 10 35008 710608 4.70 745616 11 32558 700793 4.44 733351 12 34558 721416 4.57 755974 13 34838 715789 4.64 750627 14 34013 712923 4.55 746936 15 31774 677433 4.48 709207 16 31278 669493 4.46 700771 17 31717 686887 4.41 718604 18 32116 697098 4.40 729214 19 31574 669466 4.50 701040 20 31850 670177 4.54 702027 21 31805 672467 4.52 704272 22 31655 669640 4.51 701295 23 31951 667232 4.57 699183 24 31670 666350 4.54 698020 25 31715 670691 4.52 702406 26 31610 671875 4.49 703485 27 31426 671576 4.47 703002 28 31341 664486 4.50 695827 29 31718 664903 4.55 696621 30 31334 661833 4.52 693167 31 31549 657410 4.58 688959 32 31822 658241 4.61 690063 33 31704 658802 4.59 690506 34 31216 652121 4.57 683337 35 30700 653177 4.49 683877 36 30829 658197 4.47 689026 37 30720 655346 4.48 686066 38 30790 655877 4.48 686667 39 30522 649977 4.49 680499 40 30370 641536 4.52 671906 41 30206 642876 4.49 673082 42 30023 638026 4.49 668049 43 29782 632820 4.49 662602 44 29842 633872 4.50 663714 45 29371 633110 4.43 662481 46 29345 629019 4.46 658364 47 29067 634525 4.38 663592 48 28870 630857 4.38 659727 49 28675 626944 4.37 655619 50 28284 620660 4.36 648944 51 28054 616004 4.36 644058 52 27911 613185 4.35 641096 53 27633 608215 4.35 635848 54 27219 606840 4.29 634059 55 27011 602972 4.29 629983 56 27336 606959 4.31 634295 57 26771 606425 4.23 633196 58 26612 602860 4.23 629472 59 26045 596952 4.18 622997 60 25900 592149 4.19 618049 61 25613 586792 4.18 612405 62 25693 582497 4.22 608190 63 25410 581584 4.19 606994 64 24953 575190 4.16 600143 65 25183 576104 4.19 601287 66 24736 574496 4.13 599232 67 24843 572811 4.16 597654 68 24113 572256 4.04 596369 69 24172 570351 4.07 594523 70 23771 563962 4.04 587733 71 23883 558209 4.10 582092 72 23669 555912 4.08 579581 73 22914 549203 4.01 572117 74 23014 548843 4.02 571857 75 22775 544879 4.01 567654 76 22179 541492 3.93 563671 77 22196 541879 3.93 564075 78 22224 541574 3.94 563798 79 22054 538654 3.93 560708 80 21560 536005 3.87 557565 81 21547 531181 3.90 552728 82 21608 525103 3.95 546711 83 21319 519321 3.94 540640 84 21276 516708 3.95 537984 85 20714 510207 3.90 530921 86 20338 510128 3.83 530466 87 20397 508029 3.86 528426 88 19716 505578 3.75 525294 89 19910 504531 3.80 524441 90 20017 500492 3.85 520509 91 19655 495578 3.81 515233 92 19348 491726 3.79 511074 93 19112 487222 3.77 506334 94 18873 480498 3.78 499371 95 18559 477822 3.74 496381 96 18516 474887 3.75 493403 97 18101 469953 3.71 488054 98 18116 466315 3.74 484431 99 17940 468287 3.69 486227 100 17388 460450 3.64 477838 101 17298 457492 3.64 474790 102 17186 454433 3.64 471619 103 17003 449004 3.65 466007 104 16749 443100 3.64 459849 105 16637 441826 3.63 458463 106 16506 436607 3.64 453113 107 16279 434637 3.61 450916 108 16031 431311 3.58 447342 109 15809 427598 3.57 443407 110 15615 423773 3.55 439388 111 15318 421253 3.51 436571 112 15350 416546 3.55 431896 113 15142 413564 3.53 428706 114 14839 409983 3.49 424822 115 14714 404011 3.51 418725 116 14395 402262 3.45 416657 117 14370 397779 3.49 412149 118 14143 392395 3.48 406538 119 13934 391420 3.44 405354 120 13960 388553 3.47 402513 121 13687 384131 3.44 397818 122 13477 382174 3.41 395651 123 13278 378471 3.39 391749 124 13071 374689 3.37 387760 125 13059 371338 3.40 384397 126 12628 368860 3.31 381488 127 12737 364498 3.38 377235 128 12822 361210 3.43 374032 129 12500 357733 3.38 370233 130 12133 353244 3.32 365377 131 12057 349827 3.33 361884 132 11994 346811 3.34 358805 133 11700 342376 3.30 354076 134 11666 339916 3.32 351582 135 11511 338782 3.29 350293 136 11491 333771 3.33 345262 137 11304 331870 3.29 343174 138 11155 329195 3.28 340350 139 11022 325113 3.28 336135 140 10743 320599 3.24 331342 141 10573 317259 3.23 327832 142 10450 313282 3.23 323732 143 10388 311538 3.23 321926 144 10241 307045 3.23 317286 145 10141 305103 3.22 315244 146 10076 301392 3.24 311468 147 9980 299208 3.23 309188 148 9637 294181 3.17 303818 149 9426 288088 3.17 297514 150 8702 257621 3.27 266323 151 3191 0 100.00 3191 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 87881 3186590 2.68 3274471 2 152806 2938106 4.94 3090912 3 154751 2725063 5.37 2879814 4 161644 2981123 5.14 3142767 5 147564 3037832 4.63 3185396 6 150880 3094758 4.65 3245638 7 151298 3028746 4.76 3180044 8 147456 2951996 4.76 3099452 9 150383 3041553 4.71 3191936 10 139503 2757507 4.82 2897010 11 134532 2807077 4.57 2941609 12 134880 2745131 4.68 2880011 13 131298 2604012 4.80 2735310 14 134923 2681384 4.79 2816307 15 131812 2621843 4.79 2753655 16 126003 2562010 4.69 2688013 17 126469 2595744 4.65 2722213 18 128432 2620789 4.67 2749221 19 132503 2651802 4.76 2784305 20 131956 2642729 4.76 2774685 21 132407 2631178 4.79 2763585 22 131507 2620954 4.78 2752461 23 129895 2585848 4.78 2715743 24 128885 2565450 4.78 2694335 25 128253 2562711 4.77 2690964 26 128270 2551304 4.79 2679574 27 128167 2555095 4.78 2683262 28 129545 2562671 4.81 2692216 29 130658 2553543 4.87 2684201 30 130030 2554163 4.84 2684193 31 130453 2548229 4.87 2678682 32 130080 2520550 4.91 2650630 33 127868 2495780 4.87 2623648 34 127250 2482436 4.88 2609686 35 125932 2457506 4.87 2583438 36 124183 2455109 4.81 2579292 37 124865 2465400 4.82 2590265 38 124194 2456671 4.81 2580865 39 123251 2451318 4.79 2574569 40 124806 2459730 4.83 2584536 41 123405 2431897 4.83 2555302 42 122665 2421420 4.82 2544085 43 121860 2402664 4.83 2524524 44 119706 2375720 4.80 2495426 45 117286 2356217 4.74 2473503 46 115562 2350512 4.69 2466074 47 115449 2338119 4.71 2453568 48 113804 2328364 4.66 2442168 49 113824 2331971 4.65 2445795 50 114344 2324709 4.69 2439053 51 112400 2306487 4.65 2418887 52 112317 2301004 4.65 2413321 53 110791 2278748 4.64 2389539 54 108462 2255436 4.59 2363898 55 107922 2251939 4.57 2359861 56 106308 2230594 4.55 2336902 57 104696 2216978 4.51 2321674 58 104871 2220083 4.51 2324954 59 103801 2198903 4.51 2302704 60 102404 2194087 4.46 2296491 61 102152 2189553 4.46 2291705 62 100957 2160765 4.46 2261722 63 99903 2148290 4.44 2248193 64 99028 2132016 4.44 2231044 65 97804 2117182 4.42 2214986 66 96222 2098908 4.38 2195130 67 94845 2097161 4.33 2192006 68 94111 2084633 4.32 2178744 69 93706 2074730 4.32 2168436 70 92504 2066771 4.28 2159275 71 92119 2052317 4.30 2144436 72 90919 2035296 4.28 2126215 73 90096 2024100 4.26 2114196 74 89485 2003105 4.28 2092590 75 86869 1980037 4.20 2066906 76 86289 1968324 4.20 2054613 77 85163 1955040 4.17 2040203 78 84723 1951187 4.16 2035910 79 83495 1948342 4.11 2031837 80 83381 1937332 4.13 2020713 81 82527 1928349 4.10 2010876 82 82617 1916109 4.13 1998726 83 81128 1900407 4.09 1981535 84 79760 1878572 4.07 1958332 85 78362 1864446 4.03 1942808 86 77797 1845293 4.05 1923090 87 76376 1832559 4.00 1908935 88 75643 1826884 3.98 1902527 89 75161 1816698 3.97 1891859 90 74093 1809537 3.93 1883630 91 74244 1802125 3.96 1876369 92 73219 1779778 3.95 1852997 93 72411 1766911 3.94 1839322 94 71555 1756870 3.91 1828425 95 70199 1738903 3.88 1809102 96 69323 1721403 3.87 1790726 97 68501 1708595 3.85 1777096 98 67390 1696768 3.82 1764158 99 66757 1685620 3.81 1752377 100 66228 1678295 3.80 1744523 101 66115 1663198 3.82 1729313 102 64693 1649796 3.77 1714489 103 64597 1637621 3.79 1702218 104 63248 1618490 3.76 1681738 105 62055 1602215 3.73 1664270 106 61613 1589744 3.73 1651357 107 60848 1575418 3.72 1636266 108 59842 1561277 3.69 1621119 109 59331 1552080 3.68 1611411 110 58920 1543480 3.68 1602400 111 57826 1528058 3.65 1585884 112 57751 1518437 3.66 1576188 113 56569 1506534 3.62 1563103 114 55985 1493770 3.61 1549755 115 55641 1482241 3.62 1537882 116 54903 1466942 3.61 1521845 117 54128 1451763 3.59 1505891 118 53439 1441942 3.57 1495381 119 52416 1425591 3.55 1478007 120 51795 1416206 3.53 1468001 121 51396 1403686 3.53 1455082 122 50425 1389758 3.50 1440183 123 49988 1375560 3.51 1425548 124 49763 1366608 3.51 1416371 125 49312 1352391 3.52 1401703 126 48326 1340520 3.48 1388846 127 48119 1333050 3.48 1381169 128 47582 1318749 3.48 1366331 129 46724 1307393 3.45 1354117 130 46289 1297702 3.44 1343991 131 45652 1283834 3.43 1329486 132 45355 1269239 3.45 1314594 133 44811 1259069 3.44 1303880 134 43523 1246543 3.37 1290066 135 43592 1236088 3.41 1279680 136 42953 1228576 3.38 1271529 137 42273 1213711 3.37 1255984 138 41863 1203774 3.36 1245637 139 41271 1194750 3.34 1236021 140 41102 1180795 3.36 1221897 141 40342 1169174 3.34 1209516 142 39867 1159662 3.32 1199529 143 39019 1145744 3.29 1184763 144 38828 1132702 3.31 1171530 145 38404 1123662 3.30 1162066 146 37684 1109794 3.28 1147478 147 37352 1100254 3.28 1137606 148 36910 1089241 3.28 1126151 149 35856 1062820 3.26 1098676 150 32773 949867 3.34 982640 151 10064 0 100.00 10064