CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 115826 388702 22.96 504528 2 119820 462871 20.56 582691 3 153285 578478 20.95 731763 4 153855 579538 20.98 733393 5 149859 569144 20.84 719003 6 149792 585149 20.38 734941 7 152166 562613 21.29 714779 8 160538 606356 20.93 766894 9 148539 570233 20.67 718772 10 147589 588611 20.05 736200 11 158415 598777 20.92 757192 12 151041 573352 20.85 724393 13 143251 569445 20.10 712696 14 143746 570767 20.12 714513 15 146298 562991 20.63 709289 16 151019 573462 20.85 724481 17 147807 565507 20.72 713314 18 148740 573538 20.59 722278 19 148494 573715 20.56 722209 20 148986 576635 20.53 725621 21 150346 580547 20.57 730893 22 149345 576438 20.58 725783 23 148577 579305 20.41 727882 24 150607 581002 20.59 731609 25 149301 578213 20.52 727514 26 149021 576266 20.55 725287 27 150656 583971 20.51 734627 28 148834 582351 20.36 731185 29 149981 581794 20.50 731775 30 152005 588658 20.52 740663 31 150285 585706 20.42 735991 32 150570 584416 20.49 734986 33 152615 589891 20.55 742506 34 150944 585933 20.48 736877 35 151055 585695 20.50 736750 36 153072 590802 20.58 743874 37 152315 588138 20.57 740453 38 151493 589766 20.44 741259 39 153648 593989 20.55 747637 40 152783 591392 20.53 744175 41 152326 591328 20.48 743654 42 154346 599007 20.49 753353 43 153195 593134 20.53 746329 44 153948 593935 20.58 747883 45 154530 598259 20.53 752789 46 154546 596215 20.59 750761 47 153822 595337 20.53 749159 48 154073 599932 20.43 754005 49 153944 595677 20.54 749621 50 153924 595977 20.53 749901 51 155313 601588 20.52 756901 52 153997 598261 20.47 752258 53 154555 598855 20.51 753410 54 155965 600773 20.61 756738 55 154812 598916 20.54 753728 56 155005 599185 20.55 754190 57 156055 603487 20.55 759542 58 154374 597883 20.52 752257 59 154752 598320 20.55 753072 60 155618 605221 20.45 760839 61 154991 598944 20.56 753935 62 154224 599745 20.45 753969 63 156466 605952 20.52 762418 64 155510 601377 20.55 756887 65 155718 600619 20.59 756337 66 155217 604402 20.43 759619 67 155545 599890 20.59 755435 68 154604 601219 20.46 755823 69 155911 605964 20.46 761875 70 155247 599355 20.57 754602 71 155129 599750 20.55 754879 72 155329 604535 20.44 759864 73 155519 601512 20.54 757031 74 154441 600126 20.47 754567 75 155424 601449 20.54 756873 76 154111 599318 20.45 753429 77 154451 601164 20.44 755615 78 155054 603400 20.44 758454 79 154781 601017 20.48 755798 80 154527 598899 20.51 753426 81 154690 601789 20.45 756479 82 154074 597227 20.51 751301 83 154717 597318 20.57 752035 84 154286 602812 20.38 757098 85 153615 597975 20.44 751590 86 153493 597914 20.43 751407 87 154277 600043 20.45 754320 88 153092 595788 20.44 748880 89 153099 595182 20.46 748281 90 153646 599614 20.40 753260 91 152693 595625 20.40 748318 92 151993 593662 20.38 745655 93 153088 597585 20.39 750673 94 151560 593535 20.34 745095 95 151912 593493 20.38 745405 96 151711 594448 20.33 746159 97 151018 589358 20.40 740376 98 151303 588986 20.44 740289 99 151719 592782 20.38 744501 100 150782 587597 20.42 738379 101 149473 586185 20.32 735658 102 150154 588013 20.34 738167 103 149429 584032 20.37 733461 104 148804 584199 20.30 733003 105 148501 586855 20.19 735356 106 148196 580641 20.33 728837 107 147177 578253 20.29 725430 108 147226 580711 20.23 727937 109 147506 577967 20.33 725473 110 146651 575943 20.30 722594 111 146532 578549 20.21 725081 112 146141 574141 20.29 720282 113 144879 573825 20.16 718704 114 144921 574184 20.15 719105 115 144285 571820 20.15 716105 116 143677 570078 20.13 713755 117 144001 571853 20.12 715854 118 142260 565682 20.09 707942 119 142610 564562 20.17 707172 120 142721 565981 20.14 708702 121 141023 561679 20.07 702702 122 141267 558603 20.18 699870 123 140283 559381 20.05 699664 124 139881 557695 20.05 697576 125 139757 557087 20.06 696844 126 139237 557755 19.98 696992 127 138881 553357 20.06 692238 128 138675 551736 20.09 690411 129 138096 552323 20.00 690419 130 136011 547554 19.90 683565 131 136894 545487 20.06 682381 132 136102 546505 19.94 682607 133 134017 540984 19.85 675001 134 134758 539244 19.99 674002 135 133781 541103 19.82 674884 136 133736 537796 19.92 671532 137 131857 536071 19.74 667928 138 132686 535703 19.85 668389 139 131806 531873 19.86 663679 140 129645 528810 19.69 658455 141 129040 528427 19.63 657467 142 129249 523772 19.79 653021 143 128676 522956 19.75 651632 144 128073 522649 19.68 650722 145 126926 517580 19.69 644506 146 126630 517976 19.64 644606 147 127195 521716 19.60 648911 148 125647 516349 19.57 641996 149 123222 513986 19.34 637208 150 120089 511755 19.01 631844 151 106953 459316 18.89 566269 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 12156 721808 1.66 733964 2 34501 872374 3.80 906875 3 36091 1021313 3.41 1057404 4 34688 983851 3.41 1018539 5 35198 950802 3.57 986000 6 35973 978593 3.55 1014566 7 37510 1006177 3.59 1043687 8 36396 969615 3.62 1006011 9 34947 970603 3.48 1005550 10 36335 992472 3.53 1028807 11 36210 987371 3.54 1023581 12 35162 994205 3.42 1029367 13 33792 953880 3.42 987672 14 33680 954672 3.41 988352 15 34775 974724 3.44 1009499 16 34157 981156 3.36 1015313 17 32617 965779 3.27 998396 18 32722 970016 3.26 1002738 19 32704 972074 3.25 1004778 20 32669 977035 3.24 1009704 21 32325 979530 3.19 1011855 22 31899 979698 3.15 1011597 23 31619 980944 3.12 1012563 24 31453 983630 3.10 1015083 25 31412 983198 3.10 1014610 26 31599 982974 3.11 1014573 27 31628 987617 3.10 1019245 28 30932 986261 3.04 1017193 29 31168 985911 3.06 1017079 30 30982 995338 3.02 1026320 31 31042 995514 3.02 1026556 32 31225 995748 3.04 1026973 33 30449 998955 2.96 1029404 34 30430 997790 2.96 1028220 35 30619 1001099 2.97 1031718 36 30485 1007606 2.94 1038091 37 29891 998519 2.91 1028410 38 30459 1000610 2.95 1031069 39 30395 1004568 2.94 1034963 40 29950 1004805 2.89 1034755 41 30381 1007882 2.93 1038263 42 30058 1007697 2.90 1037755 43 29858 1008636 2.88 1038494 44 30006 1006718 2.89 1036724 45 29851 1015837 2.85 1045688 46 29957 1010668 2.88 1040625 47 29915 1014834 2.86 1044749 48 29704 1013941 2.85 1043645 49 29599 1012308 2.84 1041907 50 29379 1014580 2.81 1043959 51 29321 1016732 2.80 1046053 52 29112 1015919 2.79 1045031 53 29267 1013848 2.81 1043115 54 29388 1020030 2.80 1049418 55 29000 1017142 2.77 1046142 56 29266 1019915 2.79 1049181 57 29187 1016956 2.79 1046143 58 28408 1017083 2.72 1045491 59 28847 1017792 2.76 1046639 60 28347 1019620 2.70 1047967 61 28459 1020434 2.71 1048893 62 28333 1020577 2.70 1048910 63 28308 1023010 2.69 1051318 64 28358 1018982 2.71 1047340 65 28450 1017715 2.72 1046165 66 28213 1022278 2.69 1050491 67 27952 1021389 2.66 1049341 68 28080 1021298 2.68 1049378 69 27980 1022330 2.66 1050310 70 27553 1020358 2.63 1047911 71 28088 1020331 2.68 1048419 72 27823 1026286 2.64 1054109 73 27401 1022175 2.61 1049576 74 27428 1021193 2.62 1048621 75 27338 1021528 2.61 1048866 76 27313 1021853 2.60 1049166 77 27347 1021726 2.61 1049073 78 27248 1026576 2.59 1053824 79 27034 1020155 2.58 1047189 80 27533 1020757 2.63 1048290 81 26974 1021780 2.57 1048754 82 27162 1018806 2.60 1045968 83 27016 1017996 2.59 1045012 84 27084 1022319 2.58 1049403 85 26617 1016667 2.55 1043284 86 26730 1019505 2.55 1046235 87 26579 1017772 2.55 1044351 88 26460 1014709 2.54 1041169 89 26394 1014909 2.53 1041303 90 26603 1017356 2.55 1043959 91 26365 1011593 2.54 1037958 92 26252 1010554 2.53 1036806 93 25839 1013059 2.49 1038898 94 26169 1007919 2.53 1034088 95 26319 1007172 2.55 1033491 96 26301 1004717 2.55 1031018 97 25570 1004925 2.48 1030495 98 26145 1002175 2.54 1028320 99 25884 1004546 2.51 1030430 100 25597 999041 2.50 1024638 101 25444 995387 2.49 1020831 102 25562 996122 2.50 1021684 103 25210 993137 2.48 1018347 104 25476 993608 2.50 1019084 105 25602 992334 2.52 1017936 106 25349 988104 2.50 1013453 107 24972 984027 2.47 1008999 108 25060 988289 2.47 1013349 109 24801 982385 2.46 1007186 110 24556 983054 2.44 1007610 111 24771 977990 2.47 1002761 112 24345 979200 2.43 1003545 113 24493 975850 2.45 1000343 114 24401 971884 2.45 996285 115 24284 968735 2.45 993019 116 24158 967098 2.44 991256 117 24456 963885 2.47 988341 118 24181 962837 2.45 987018 119 23905 959599 2.43 983504 120 23956 959666 2.44 983622 121 24069 955643 2.46 979712 122 23632 953101 2.42 976733 123 23821 951902 2.44 975723 124 23525 950027 2.42 973552 125 23535 945370 2.43 968905 126 23755 941943 2.46 965698 127 23265 939694 2.42 962959 128 23218 934754 2.42 957972 129 23125 933638 2.42 956763 130 23127 928950 2.43 952077 131 22635 927849 2.38 950484 132 22818 925331 2.41 948149 133 22556 920319 2.39 942875 134 22322 917473 2.38 939795 135 22310 915524 2.38 937834 136 22279 908915 2.39 931194 137 22225 904729 2.40 926954 138 22033 903064 2.38 925097 139 22179 899012 2.41 921191 140 21951 896339 2.39 918290 141 21674 892241 2.37 913915 142 21637 887789 2.38 909426 143 21739 884882 2.40 906621 144 21763 882251 2.41 904014 145 21630 880605 2.40 902235 146 21957 879575 2.44 901532 147 22335 877505 2.48 899840 148 22604 870543 2.53 893147 149 22165 864269 2.50 886434 150 20974 857938 2.39 878912 151 17607 792777 2.17 810384 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 68802 3001773 2.24 3070575 2 155888 3418501 4.36 3574389 3 197874 3779143 4.98 3977017 4 166194 3689299 4.31 3855493 5 158158 3713719 4.08 3871877 6 161125 3867139 4.00 4028264 7 161350 3855924 4.02 4017274 8 168193 4012025 4.02 4180218 9 165421 4021554 3.95 4186975 10 162278 3965644 3.93 4127922 11 169269 4052162 4.01 4221431 12 160853 4002384 3.86 4163237 13 154735 3855590 3.86 4010325 14 155643 3903183 3.83 4058826 15 155066 3930074 3.80 4085140 16 150307 3952816 3.66 4103123 17 143337 3882041 3.56 4025378 18 142095 3901738 3.51 4043833 19 140351 3896548 3.48 4036899 20 138203 3901519 3.42 4039722 21 136289 3924808 3.36 4061097 22 134485 3916500 3.32 4050985 23 133679 3914195 3.30 4047874 24 132392 3936100 3.25 4068492 25 130181 3920197 3.21 4050378 26 130412 3914001 3.22 4044413 27 128654 3931616 3.17 4060270 28 128279 3918358 3.17 4046637 29 128342 3919294 3.17 4047636 30 128221 3948586 3.15 4076807 31 127394 3935238 3.14 4062632 32 127474 3938918 3.13 4066392 33 126968 3962291 3.10 4089259 34 126139 3946672 3.10 4072811 35 124818 3942744 3.07 4067562 36 124699 3959376 3.05 4084075 37 123275 3942729 3.03 4066004 38 123440 3942894 3.04 4066334 39 123318 3964876 3.02 4088194 40 122675 3955862 3.01 4078537 41 122654 3954175 3.01 4076829 42 122908 3974212 3.00 4097120 43 121769 3965611 2.98 4087380 44 122221 3968059 2.99 4090280 45 121553 3984429 2.96 4105982 46 121310 3970766 2.96 4092076 47 120795 3966393 2.96 4087188 48 119806 3980546 2.92 4100352 49 119937 3968899 2.93 4088836 50 119780 3971464 2.93 4091244 51 119003 3981771 2.90 4100774 52 118574 3970360 2.90 4088934 53 118105 3974290 2.89 4092395 54 117988 3991253 2.87 4109241 55 117297 3977383 2.86 4094680 56 117071 3980911 2.86 4097982 57 116487 3988878 2.84 4105365 58 116918 3982053 2.85 4098971 59 116791 3977219 2.85 4094010 60 115459 3991979 2.81 4107438 61 114669 3976961 2.80 4091630 62 114997 3977035 2.81 4092032 63 114800 3987384 2.80 4102184 64 114124 3977365 2.79 4091489 65 114091 3977488 2.79 4091579 66 113569 3992313 2.77 4105882 67 113303 3986631 2.76 4099934 68 112763 3980498 2.75 4093261 69 113156 3991494 2.76 4104650 70 111781 3978730 2.73 4090511 71 112084 3978973 2.74 4091057 72 111712 3986806 2.73 4098518 73 111010 3973205 2.72 4084215 74 110505 3971433 2.71 4081938 75 109973 3982502 2.69 4092475 76 110075 3965846 2.70 4075921 77 110473 3968114 2.71 4078587 78 109683 3972601 2.69 4082284 79 108942 3962637 2.68 4071579 80 108496 3950522 2.67 4059018 81 108521 3965152 2.66 4073673 82 107939 3953330 2.66 4061269 83 107448 3945479 2.65 4052927 84 107090 3955086 2.64 4062176 85 106507 3938354 2.63 4044861 86 108011 3931855 2.67 4039866 87 106809 3945996 2.64 4052805 88 106415 3931319 2.64 4037734 89 105573 3923640 2.62 4029213 90 105656 3930483 2.62 4036139 91 104894 3917630 2.61 4022524 92 104778 3907841 2.61 4012619 93 104578 3914424 2.60 4019002 94 103682 3897803 2.59 4001485 95 103519 3896097 2.59 3999616 96 103870 3899484 2.59 4003354 97 102388 3882357 2.57 3984745 98 102877 3876356 2.59 3979233 99 102517 3883288 2.57 3985805 100 101844 3869139 2.56 3970983 101 101251 3860192 2.56 3961443 102 101819 3869833 2.56 3971652 103 101183 3852043 2.56 3953226 104 101378 3847900 2.57 3949278 105 100761 3847460 2.55 3948221 106 99387 3831830 2.53 3931217 107 99667 3822004 2.54 3921671 108 99605 3825144 2.54 3924749 109 99138 3807833 2.54 3906971 110 98935 3797851 2.54 3896786 111 98908 3801408 2.54 3900316 112 98181 3791515 2.52 3889696 113 97748 3779927 2.52 3877675 114 97242 3776652 2.51 3873894 115 97367 3758805 2.52 3856172 116 96168 3754783 2.50 3850951 117 96646 3754268 2.51 3850914 118 96151 3741632 2.51 3837783 119 95888 3722344 2.51 3818232 120 95284 3720190 2.50 3815474 121 94408 3701630 2.49 3796038 122 94439 3691815 2.49 3786254 123 94490 3693582 2.49 3788072 124 93899 3673063 2.49 3766962 125 92988 3659031 2.48 3752019 126 93316 3658459 2.49 3751775 127 92963 3640243 2.49 3733206 128 92015 3636233 2.47 3728248 129 91712 3627969 2.47 3719681 130 90917 3610298 2.46 3701215 131 90817 3593942 2.46 3684759 132 91245 3593114 2.48 3684359 133 90537 3573530 2.47 3664067 134 89576 3556117 2.46 3645693 135 89107 3550548 2.45 3639655 136 89295 3530355 2.47 3619650 137 89161 3518061 2.47 3607222 138 88462 3519937 2.45 3608399 139 88041 3497684 2.46 3585725 140 87379 3485542 2.45 3572921 141 86839 3476762 2.44 3563601 142 86900 3457922 2.45 3544822 143 86509 3442839 2.45 3529348 144 86559 3436492 2.46 3523051 145 86038 3423807 2.45 3509845 146 87086 3417392 2.48 3504478 147 87386 3420620 2.49 3508006 148 88108 3410799 2.52 3498907 149 86662 3389192 2.49 3475854 150 83780 3358240 2.43 3442020 151 67752 3154058 2.10 3221810 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 21134 992413 2.09 1013547 2 39980 532369 6.99 572349 3 66675 391518 14.55 458193 4 91515 480746 15.99 572261 5 92458 497087 15.68 589545 6 91436 478762 16.04 570198 7 95046 480162 16.52 575208 8 93950 465659 16.79 559609 9 103383 492926 17.34 596309 10 101544 455418 18.23 556962 11 101463 464175 17.94 565638 12 108869 473324 18.70 582193 13 104615 448482 18.91 553097 14 99934 443724 18.38 543658 15 100658 441010 18.58 541668 16 102198 434547 19.04 536745 17 105474 443415 19.22 548889 18 104416 433869 19.40 538285 19 105406 435427 19.49 540833 20 104813 433684 19.46 538497 21 104753 432400 19.50 537153 22 105552 435381 19.51 540933 23 104752 429806 19.60 534558 24 104435 430025 19.54 534460 25 105991 431259 19.73 537250 26 105394 427708 19.77 533102 27 103933 422939 19.73 526872 28 104901 426256 19.75 531157 29 104537 422594 19.83 527131 30 104315 420440 19.88 524755 31 105192 420770 20.00 525962 32 104358 418469 19.96 522827 33 103917 415737 20.00 519654 34 104592 416858 20.06 521450 35 103060 413387 19.96 516447 36 103088 410545 20.07 513633 37 104382 411382 20.24 515764 38 102651 408056 20.10 510707 39 102045 406083 20.08 508128 40 102477 406911 20.12 509388 41 101879 401796 20.23 503675 42 101487 399713 20.25 501200 43 102102 401158 20.29 503260 44 100616 397765 20.19 498381 45 100260 393679 20.30 493939 46 100144 393314 20.29 493458 47 98765 390737 20.18 489502 48 98980 387559 20.34 486539 49 99125 385301 20.46 484426 50 97426 383100 20.27 480526 51 97327 379447 20.41 476774 52 97732 380579 20.43 478311 53 96807 376295 20.46 473102 54 95859 374099 20.40 469958 55 96148 373234 20.48 469382 56 95915 368448 20.66 464363 57 93786 366324 20.38 460110 58 94444 366906 20.47 461350 59 93953 363106 20.56 457059 60 92756 358814 20.54 451570 61 92436 360992 20.39 453428 62 92326 356593 20.57 448919 63 91412 352018 20.61 443430 64 91252 353225 20.53 444477 65 90557 349732 20.57 440289 66 90146 345786 20.68 435932 67 90026 345407 20.68 435433 68 88912 341637 20.65 430549 69 88182 338543 20.66 426725 70 87831 337979 20.63 425810 71 86810 335194 20.57 422004 72 86924 333099 20.70 420023 73 86792 332815 20.68 419607 74 86017 328352 20.76 414369 75 85288 325616 20.76 410904 76 84624 323399 20.74 408023 77 84098 321714 20.72 405812 78 83262 318620 20.72 401882 79 83254 318031 20.75 401285 80 82252 314433 20.73 396685 81 81864 313881 20.69 395745 82 81863 311485 20.81 393348 83 80492 308687 20.68 389179 84 80471 304711 20.89 385182 85 79924 305390 20.74 385314 86 78777 302130 20.68 380907 87 78685 299198 20.82 377883 88 77868 299044 20.66 376912 89 77668 295282 20.83 372950 90 76785 292271 20.81 369056 91 76334 291323 20.76 367657 92 76264 287728 20.95 363992 93 75578 286651 20.86 362229 94 75031 285114 20.83 360145 95 74808 282963 20.91 357771 96 74178 279725 20.96 353903 97 73448 278294 20.88 351742 98 72622 275717 20.85 348339 99 71971 273577 20.83 345548 100 71819 272604 20.85 344423 101 71080 269810 20.85 340890 102 70671 267151 20.92 337822 103 69602 264995 20.80 334597 104 69528 263195 20.90 332723 105 68951 259160 21.01 328111 106 68866 260216 20.93 329082 107 67649 256236 20.89 323885 108 67457 254436 20.96 321893 109 66916 253329 20.90 320245 110 66317 250076 20.96 316393 111 65407 247755 20.89 313162 112 64686 246672 20.78 311358 113 64494 244988 20.84 309482 114 63497 242356 20.76 305853 115 63753 240905 20.93 304658 116 62971 239250 20.84 302221 117 62446 236854 20.86 299300 118 61879 235193 20.83 297072 119 61469 232417 20.92 293886 120 60461 230555 20.78 291016 121 60543 229671 20.86 290214 122 59581 226645 20.82 286226 123 59619 224434 20.99 284053 124 58776 223912 20.79 282688 125 58245 220282 20.91 278527 126 57680 219942 20.78 277622 127 57402 219049 20.76 276451 128 56915 216020 20.85 272935 129 55974 214008 20.73 269982 130 56017 212991 20.82 269008 131 54790 210223 20.67 265013 132 54930 207950 20.90 262880 133 54354 206370 20.85 260724 134 53870 204578 20.84 258448 135 53172 202537 20.79 255709 136 53504 201819 20.96 255323 137 52394 200840 20.69 253234 138 51597 198011 20.67 249608 139 51797 196512 20.86 248309 140 50994 194501 20.77 245495 141 50519 192154 20.82 242673 142 50070 190990 20.77 241060 143 49473 188467 20.79 237940 144 48640 186781 20.66 235421 145 47813 185038 20.53 232851 146 48124 183404 20.79 231528 147 47740 180790 20.89 228530 148 47043 179828 20.74 226871 149 46240 174736 20.93 220976 150 44672 151008 22.83 195680 151 37304 0 100.00 37304 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 13319 746465 1.75 759784 2 36432 1126260 3.13 1162692 3 27373 737367 3.58 764740 4 31659 679886 4.45 711545 5 25535 820148 3.02 845683 6 24053 809270 2.89 833323 7 23445 755552 3.01 778997 8 23787 765149 3.02 788936 9 24686 784841 3.05 809527 10 23502 748001 3.05 771503 11 22223 738619 2.92 760842 12 23077 757014 2.96 780091 13 22974 748173 2.98 771147 14 22864 752426 2.95 775290 15 21416 719683 2.89 741099 16 21224 714670 2.88 735894 17 21436 728045 2.86 749481 18 22126 737810 2.91 759936 19 21591 716966 2.92 738557 20 21844 718247 2.95 740091 21 21156 720754 2.85 741910 22 21392 717075 2.90 738467 23 21276 718379 2.88 739655 24 20928 715798 2.84 736726 25 21168 714760 2.88 735928 26 21022 715649 2.85 736671 27 20853 714391 2.84 735244 28 20909 708409 2.87 729318 29 20891 709123 2.86 730014 30 20941 707566 2.87 728507 31 20433 702765 2.83 723198 32 20585 701171 2.85 721756 33 20535 701879 2.84 722414 34 20427 694089 2.86 714516 35 20654 695070 2.89 715724 36 20298 693262 2.84 713560 37 20003 687727 2.83 707730 38 19823 691582 2.79 711405 39 19661 685698 2.79 705359 40 19494 679543 2.79 699037 41 19440 679511 2.78 698951 42 19323 674749 2.78 694072 43 19100 671046 2.77 690146 44 18992 670286 2.76 689278 45 19132 666543 2.79 685675 46 18817 659631 2.77 678448 47 18816 660532 2.77 679348 48 18570 655275 2.76 673845 49 18367 652937 2.74 671304 50 18160 648046 2.73 666206 51 17793 642356 2.70 660149 52 17767 641750 2.69 659517 53 17548 637089 2.68 654637 54 17421 631697 2.68 649118 55 17248 628010 2.67 645258 56 17057 628904 2.64 645961 57 16678 622732 2.61 639410 58 16424 617612 2.59 634036 59 16772 613771 2.66 630543 60 16157 611126 2.58 627283 61 16020 606682 2.57 622702 62 16152 603153 2.61 619305 63 16040 600807 2.60 616847 64 15701 593849 2.58 609550 65 15599 593488 2.56 609087 66 15459 588207 2.56 603666 67 15444 584573 2.57 600017 68 15215 582220 2.55 597435 69 14807 578278 2.50 593085 70 14625 572843 2.49 587468 71 14521 570681 2.48 585202 72 14395 567269 2.47 581664 73 14323 561755 2.49 576078 74 14395 560169 2.51 574564 75 14104 555555 2.48 569659 76 13714 550521 2.43 564235 77 13705 548325 2.44 562030 78 13813 546190 2.47 560003 79 13501 539928 2.44 553429 80 13390 538792 2.42 552182 81 13145 534104 2.40 547249 82 13127 529823 2.42 542950 83 12969 526951 2.40 539920 84 12953 522599 2.42 535552 85 12532 518263 2.36 530795 86 12484 517213 2.36 529697 87 12457 511748 2.38 524205 88 12187 507335 2.35 519522 89 12135 506518 2.34 518653 90 11950 502344 2.32 514294 91 11639 497166 2.29 508805 92 11589 495944 2.28 507533 93 11722 489877 2.34 501599 94 11590 486157 2.33 497747 95 11282 483610 2.28 494892 96 11279 480538 2.29 491817 97 10984 476515 2.25 487499 98 11014 472881 2.28 483895 99 10685 469501 2.23 480186 100 10624 463914 2.24 474538 101 10564 461481 2.24 472045 102 10464 458582 2.23 469046 103 10315 453309 2.22 463624 104 10183 450632 2.21 460815 105 10250 446429 2.24 456679 106 9952 442545 2.20 452497 107 9909 440728 2.20 450637 108 9761 436571 2.19 446332 109 9741 432022 2.21 441763 110 9761 430788 2.22 440549 111 9543 425829 2.19 435372 112 9219 422828 2.13 432047 113 9250 419797 2.16 429047 114 8979 418120 2.10 427099 115 9047 410890 2.15 419937 116 8935 409779 2.13 418714 117 8790 406234 2.12 415024 118 8762 400925 2.14 409687 119 8573 398920 2.10 407493 120 8512 396860 2.10 405372 121 8301 392376 2.07 400677 122 8374 391561 2.09 399935 123 8241 385653 2.09 393894 124 8123 382542 2.08 390665 125 8335 380238 2.15 388573 126 8128 377008 2.11 385136 127 7949 373028 2.09 380977 128 7958 370822 2.10 378780 129 7723 366562 2.06 374285 130 7705 363856 2.07 371561 131 7574 360596 2.06 368170 132 7555 357498 2.07 365053 133 7391 353428 2.05 360819 134 7293 350536 2.04 357829 135 7258 349285 2.04 356543 136 7218 344528 2.05 351746 137 6998 342156 2.00 349154 138 6822 339668 1.97 346490 139 7011 335806 2.05 342817 140 6724 331892 1.99 338616 141 6692 329090 1.99 335782 142 6658 325251 2.01 331909 143 6574 322532 2.00 329106 144 6629 319731 2.03 326360 145 6503 316213 2.02 322716 146 6278 313789 1.96 320067 147 6104 309917 1.93 316021 148 6278 306489 2.01 312767 149 6046 298887 1.98 304933 150 5471 267562 2.00 273033 151 2411 0 100.00 2411 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 55634 3223682 1.70 3279316 2 97596 3120785 3.03 3218381 3 110967 3131492 3.42 3242459 4 116434 3353432 3.36 3469866 5 103379 3336933 3.00 3440312 6 101587 3321466 2.97 3423053 7 101631 3251244 3.03 3352875 8 98883 3139213 3.05 3238096 9 99440 3189509 3.02 3288949 10 93790 2981228 3.05 3075018 11 91533 2981399 2.98 3072932 12 91836 2968881 3.00 3060717 13 89771 2882698 3.02 2972469 14 91695 2928729 3.04 3020424 15 90739 2899063 3.03 2989802 16 88227 2847115 3.01 2935342 17 87444 2858911 2.97 2946355 18 88012 2867397 2.98 2955409 19 88531 2888582 2.97 2977113 20 88458 2874995 2.98 2963453 21 88168 2870546 2.98 2958714 22 88440 2868035 2.99 2956475 23 87911 2847335 3.00 2935246 24 86497 2833615 2.96 2920112 25 86712 2836578 2.97 2923290 26 86638 2816683 2.98 2903321 27 86348 2814466 2.98 2900814 28 85947 2812571 2.97 2898518 29 86144 2799548 2.99 2885692 30 85193 2790145 2.96 2875338 31 85338 2783999 2.97 2869337 32 85309 2766257 2.99 2851566 33 84335 2755612 2.97 2839947 34 84199 2748437 2.97 2832636 35 83618 2729004 2.97 2812622 36 82408 2718070 2.94 2800478 37 82635 2716611 2.95 2799246 38 81904 2697331 2.95 2779235 39 81714 2686238 2.95 2767952 40 81004 2679361 2.93 2760365 41 79951 2660119 2.92 2740070 42 79544 2649434 2.91 2728978 43 78937 2636872 2.91 2715809 44 77855 2616613 2.89 2694468 45 77053 2603563 2.87 2680616 46 76157 2593189 2.85 2669346 47 75697 2575126 2.86 2650823 48 74668 2560323 2.83 2634991 49 74606 2549871 2.84 2624477 50 73434 2535416 2.81 2608850 51 72544 2513784 2.80 2586328 52 72190 2505946 2.80 2578136 53 71813 2488135 2.81 2559948 54 70264 2475495 2.76 2545759 55 69362 2463928 2.74 2533290 56 69191 2444571 2.75 2513762 57 68221 2428704 2.73 2496925 58 67878 2421363 2.73 2489241 59 66859 2394654 2.72 2461513 60 66034 2381150 2.70 2447184 61 65679 2369435 2.70 2435114 62 64810 2346865 2.69 2411675 63 63697 2337299 2.65 2400996 64 63097 2324235 2.64 2387332 65 62717 2306946 2.65 2369663 66 62228 2294251 2.64 2356479 67 61792 2282495 2.64 2344287 68 60433 2266725 2.60 2327158 69 60338 2252186 2.61 2312524 70 59961 2239432 2.61 2299393 71 58543 2215346 2.57 2273889 72 57877 2203498 2.56 2261375 73 57541 2191416 2.56 2248957 74 57049 2174954 2.56 2232003 75 56102 2159525 2.53 2215627 76 55542 2145848 2.52 2201390 77 54921 2130441 2.51 2185362 78 54454 2115674 2.51 2170128 79 53279 2104571 2.47 2157850 80 53132 2089714 2.48 2142846 81 52779 2072841 2.48 2125620 82 52095 2065501 2.46 2117596 83 51282 2045050 2.45 2096332 84 50530 2030423 2.43 2080953 85 50395 2021706 2.43 2072101 86 50172 2003527 2.44 2053699 87 49081 1991609 2.41 2040690 88 48656 1980149 2.40 2028805 89 48044 1961569 2.39 2009613 90 47744 1947800 2.39 1995544 91 47037 1937089 2.37 1984126 92 46790 1918731 2.38 1965521 93 45863 1902770 2.35 1948633 94 45549 1894274 2.35 1939823 95 44759 1877335 2.33 1922094 96 44524 1864328 2.33 1908852 97 44057 1853852 2.32 1897909 98 43174 1837140 2.30 1880314 99 43039 1821727 2.31 1864766 100 42107 1809802 2.27 1851909 101 41889 1794560 2.28 1836449 102 41309 1777781 2.27 1819090 103 41235 1769218 2.28 1810453 104 40544 1753784 2.26 1794328 105 39683 1740626 2.23 1780309 106 39294 1729078 2.22 1768372 107 38974 1713944 2.22 1752918 108 38889 1702559 2.23 1741448 109 38084 1688273 2.21 1726357 110 37871 1675789 2.21 1713660 111 37167 1661121 2.19 1698288 112 36639 1652292 2.17 1688931 113 36206 1634060 2.17 1670266 114 36204 1623836 2.18 1660040 115 35267 1612995 2.14 1648262 116 35099 1600107 2.15 1635206 117 34643 1584679 2.14 1619322 118 34531 1572033 2.15 1606564 119 33895 1558625 2.13 1592520 120 33485 1546073 2.12 1579558 121 33259 1535302 2.12 1568561 122 32519 1518018 2.10 1550537 123 32311 1507869 2.10 1540180 124 32089 1495599 2.10 1527688 125 31490 1483314 2.08 1514804 126 31282 1471189 2.08 1502471 127 30998 1463956 2.07 1494954 128 30846 1451203 2.08 1482049 129 30198 1432966 2.06 1463164 130 30247 1424927 2.08 1455174 131 29732 1408265 2.07 1437997 132 29511 1395022 2.07 1424533 133 28728 1383846 2.03 1412574 134 28606 1369600 2.05 1398206 135 28088 1362581 2.02 1390669 136 27868 1353303 2.02 1381171 137 27721 1337707 2.03 1365428 138 27416 1324265 2.03 1351681 139 27234 1315904 2.03 1343138 140 26969 1301838 2.03 1328807 141 26576 1289119 2.02 1315695 142 26053 1281073 1.99 1307126 143 25832 1266952 2.00 1292784 144 25538 1251978 2.00 1277516 145 25001 1244538 1.97 1269539 146 25231 1231102 2.01 1256333 147 24443 1217312 1.97 1241755 148 24295 1203463 1.98 1227758 149 23592 1178671 1.96 1202263 150 21557 1053943 2.00 1075500 151 7530 0 100.00 7530