ERR10684015.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 59992270 lines in total Total number of methylation call strings processed: 119984540 Final Cytosine Methylation Report ================================= Total number of C's analysed: 2268643408 Total methylated C's in CpG context: 40928369 Total methylated C's in CHG context: 1698868 Total methylated C's in CHH context: 6171934 Total C to T conversions in CpG context: 229432200 Total C to T conversions in CHG context: 377639767 Total C to T conversions in CHH context: 1612772270 C methylated in CpG context: 15.1% C methylated in non-CpG context: 0.4%