CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 158463 626692 20.18 785155 2 143914 699473 17.06 843387 3 181621 878107 17.14 1059728 4 186729 889454 17.35 1076183 5 184381 864841 17.57 1049222 6 182424 883807 17.11 1066231 7 187274 853522 17.99 1040796 8 197227 919289 17.66 1116516 9 180811 863041 17.32 1043852 10 181313 888452 16.95 1069765 11 199146 913208 17.90 1112354 12 187453 868316 17.76 1055769 13 176464 861637 17.00 1038101 14 178859 863958 17.15 1042817 15 180524 851524 17.49 1032048 16 187923 872489 17.72 1060412 17 184510 857002 17.72 1041512 18 186568 864498 17.75 1051066 19 184648 863929 17.61 1048577 20 187322 869888 17.72 1057210 21 188091 877019 17.66 1065110 22 185815 867950 17.63 1053765 23 187230 872329 17.67 1059559 24 188816 875665 17.74 1064481 25 187895 872929 17.71 1060824 26 186691 871035 17.65 1057726 27 188096 878663 17.63 1066759 28 186372 876088 17.54 1062460 29 186652 875700 17.57 1062352 30 189050 883569 17.63 1072619 31 187998 881679 17.58 1069677 32 188592 881431 17.63 1070023 33 190105 885759 17.67 1075864 34 189447 880528 17.71 1069975 35 188771 882623 17.62 1071394 36 190703 891386 17.62 1082089 37 188672 885966 17.56 1074638 38 189060 882213 17.65 1071273 39 190344 889894 17.62 1080238 40 189867 886367 17.64 1076234 41 189413 889265 17.56 1078678 42 192624 896532 17.69 1089156 43 190139 889603 17.61 1079742 44 191495 889762 17.71 1081257 45 192837 897789 17.68 1090626 46 191520 895282 17.62 1086802 47 190943 893303 17.61 1084246 48 192482 898308 17.65 1090790 49 191147 893707 17.62 1084854 50 191367 893144 17.65 1084511 51 192493 898020 17.65 1090513 52 191134 896290 17.58 1087424 53 192488 897165 17.67 1089653 54 192425 900149 17.61 1092574 55 192381 897594 17.65 1089975 56 192007 898557 17.61 1090564 57 193402 905621 17.60 1099023 58 191350 900214 17.53 1091564 59 191642 897802 17.59 1089444 60 192886 902884 17.60 1095770 61 192344 898672 17.63 1091016 62 191617 896212 17.61 1087829 63 193143 905693 17.58 1098836 64 191234 901060 17.51 1092294 65 192127 899251 17.60 1091378 66 192406 906423 17.51 1098829 67 192353 900223 17.61 1092576 68 190917 899689 17.51 1090606 69 192492 904497 17.55 1096989 70 191722 899474 17.57 1091196 71 191270 899279 17.54 1090549 72 192558 903740 17.56 1096298 73 192495 898610 17.64 1091105 74 191376 898728 17.56 1090104 75 192387 902422 17.57 1094809 76 191855 900503 17.56 1092358 77 190732 899822 17.49 1090554 78 191097 902784 17.47 1093881 79 190997 901088 17.49 1092085 80 190727 896883 17.54 1087610 81 191344 901027 17.52 1092371 82 190293 897565 17.49 1087858 83 190898 897806 17.53 1088704 84 191929 902501 17.54 1094430 85 190248 897796 17.49 1088044 86 191312 898205 17.56 1089517 87 190939 900908 17.49 1091847 88 190446 898336 17.49 1088782 89 189067 895073 17.44 1084140 90 189457 899175 17.40 1088632 91 189259 894698 17.46 1083957 92 188814 890412 17.50 1079226 93 188696 896434 17.39 1085130 94 188773 892545 17.46 1081318 95 188010 891853 17.41 1079863 96 188252 895046 17.38 1083298 97 188019 891126 17.42 1079145 98 188090 887656 17.48 1075746 99 187879 892318 17.39 1080197 100 186262 885464 17.38 1071726 101 185193 885492 17.30 1070685 102 186658 887695 17.37 1074353 103 186440 881791 17.45 1068231 104 185733 881248 17.41 1066981 105 186059 887401 17.33 1073460 106 183712 878518 17.29 1062230 107 183998 876636 17.35 1060634 108 183419 878274 17.28 1061693 109 182400 876171 17.23 1058571 110 183135 874564 17.31 1057699 111 182042 875831 17.21 1057873 112 182006 872111 17.27 1054117 113 182275 870285 17.32 1052560 114 182455 871699 17.31 1054154 115 180971 870379 17.21 1051350 116 180430 868529 17.20 1048959 117 180798 867711 17.24 1048509 118 179586 864189 17.21 1043775 119 179159 862156 17.21 1041315 120 178682 863351 17.15 1042033 121 177717 859294 17.14 1037011 122 177536 853522 17.22 1031058 123 176947 857925 17.10 1034872 124 176585 854154 17.13 1030739 125 176251 853754 17.11 1030005 126 175542 852986 17.07 1028528 127 174932 849108 17.08 1024040 128 174478 846903 17.08 1021381 129 174244 848198 17.04 1022442 130 172712 841977 17.02 1014689 131 172042 839515 17.01 1011557 132 173065 841364 17.06 1014429 133 171061 834797 17.01 1005858 134 170872 831624 17.04 1002496 135 170783 834923 16.98 1005706 136 170206 830591 17.01 1000797 137 168928 827341 16.96 996269 138 168844 829360 16.91 998204 139 167407 821748 16.92 989155 140 166724 820673 16.89 987397 141 166222 818054 16.89 984276 142 164689 813607 16.83 978296 143 164077 808809 16.86 972886 144 163315 811006 16.76 974321 145 162658 806842 16.78 969500 146 162946 805802 16.82 968748 147 162561 809826 16.72 972387 148 160417 806235 16.60 966652 149 158258 797934 16.55 956192 150 153732 794534 16.21 948266 151 136001 713983 16.00 849984 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 6969 1131083 0.61 1138052 2 15567 1306383 1.18 1321950 3 17062 1544214 1.09 1561276 4 16545 1478113 1.11 1494658 5 16164 1415536 1.13 1431700 6 16928 1457881 1.15 1474809 7 18029 1511087 1.18 1529116 8 17281 1439200 1.19 1456481 9 17024 1433490 1.17 1450514 10 17619 1471450 1.18 1489069 11 18104 1462481 1.22 1480585 12 17309 1482164 1.15 1499473 13 16781 1410791 1.18 1427572 14 16707 1414142 1.17 1430849 15 17301 1450382 1.18 1467683 16 17264 1459882 1.17 1477146 17 16720 1429031 1.16 1445751 18 16800 1430950 1.16 1447750 19 16857 1439233 1.16 1456090 20 16630 1445008 1.14 1461638 21 16893 1444668 1.16 1461561 22 16312 1448716 1.11 1465028 23 16657 1453261 1.13 1469918 24 16719 1454379 1.14 1471098 25 16617 1451808 1.13 1468425 26 16450 1452542 1.12 1468992 27 16726 1457361 1.13 1474087 28 16504 1457420 1.12 1473924 29 16522 1457032 1.12 1473554 30 16475 1466583 1.11 1483058 31 16263 1469739 1.09 1486002 32 16341 1465152 1.10 1481493 33 16232 1467214 1.09 1483446 34 16502 1474649 1.11 1491151 35 16162 1473930 1.08 1490092 36 16116 1484656 1.07 1500772 37 16292 1472157 1.09 1488449 38 16050 1476591 1.08 1492641 39 16180 1480930 1.08 1497110 40 16332 1479405 1.09 1495737 41 16046 1483668 1.07 1499714 42 16058 1484565 1.07 1500623 43 16016 1484055 1.07 1500071 44 16273 1484918 1.08 1501191 45 15905 1491888 1.05 1507793 46 16066 1486924 1.07 1502990 47 16007 1490247 1.06 1506254 48 15931 1491931 1.06 1507862 49 16028 1488891 1.07 1504919 50 15861 1492220 1.05 1508081 51 15666 1493903 1.04 1509569 52 15989 1493117 1.06 1509106 53 15875 1490356 1.05 1506231 54 15701 1498328 1.04 1514029 55 15809 1496188 1.05 1511997 56 15641 1500550 1.03 1516191 57 15387 1495155 1.02 1510542 58 15556 1495554 1.03 1511110 59 15548 1495701 1.03 1511249 60 15636 1501568 1.03 1517204 61 15434 1496436 1.02 1511870 62 15313 1499189 1.01 1514502 63 15739 1503549 1.04 1519288 64 15356 1496668 1.02 1512024 65 15402 1497343 1.02 1512745 66 15266 1500172 1.01 1515438 67 15198 1502801 1.00 1517999 68 15424 1497471 1.02 1512895 69 15375 1501714 1.01 1517089 70 15171 1500570 1.00 1515741 71 15341 1502481 1.01 1517822 72 15249 1502873 1.00 1518122 73 15141 1499615 1.00 1514756 74 15170 1499201 1.00 1514371 75 15345 1501606 1.01 1516951 76 15231 1504469 1.00 1519700 77 15102 1501530 1.00 1516632 78 14976 1507598 0.98 1522574 79 15197 1500034 1.00 1515231 80 15313 1498595 1.01 1513908 81 15078 1504417 0.99 1519495 82 15315 1500815 1.01 1516130 83 15163 1496240 1.00 1511403 84 14978 1505831 0.98 1520809 85 14761 1497455 0.98 1512216 86 14999 1500641 0.99 1515640 87 15015 1500328 0.99 1515343 88 15107 1494890 1.00 1509997 89 14709 1494145 0.97 1508854 90 14915 1499303 0.98 1514218 91 14911 1494030 0.99 1508941 92 14755 1491380 0.98 1506135 93 14782 1493858 0.98 1508640 94 14860 1492367 0.99 1507227 95 14748 1486800 0.98 1501548 96 14746 1486909 0.98 1501655 97 14640 1484681 0.98 1499321 98 14831 1480691 0.99 1495522 99 14764 1483125 0.99 1497889 100 14579 1481661 0.97 1496240 101 14739 1475897 0.99 1490636 102 14622 1475342 0.98 1489964 103 14468 1472864 0.97 1487332 104 14361 1473390 0.97 1487751 105 14445 1469977 0.97 1484422 106 14318 1464775 0.97 1479093 107 14120 1460160 0.96 1474280 108 14268 1465758 0.96 1480026 109 14246 1458096 0.97 1472342 110 14254 1457401 0.97 1471655 111 14290 1455836 0.97 1470126 112 14134 1456686 0.96 1470820 113 14033 1450779 0.96 1464812 114 13958 1449849 0.95 1463807 115 13772 1445998 0.94 1459770 116 13844 1441656 0.95 1455500 117 14152 1444703 0.97 1458855 118 13965 1440549 0.96 1454514 119 13868 1437206 0.96 1451074 120 13793 1437338 0.95 1451131 121 13914 1428687 0.96 1442601 122 13719 1430895 0.95 1444614 123 13906 1428561 0.96 1442467 124 13499 1425213 0.94 1438712 125 13474 1419226 0.94 1432700 126 13594 1418068 0.95 1431662 127 13377 1413091 0.94 1426468 128 13349 1406247 0.94 1419596 129 13405 1404189 0.95 1417594 130 13414 1399178 0.95 1412592 131 13377 1396410 0.95 1409787 132 13294 1398348 0.94 1411642 133 13480 1390849 0.96 1404329 134 13194 1387980 0.94 1401174 135 13170 1383213 0.94 1396383 136 13154 1376303 0.95 1389457 137 13124 1371842 0.95 1384966 138 13075 1368603 0.95 1381678 139 13017 1363809 0.95 1376826 140 13109 1360728 0.95 1373837 141 12918 1355143 0.94 1368061 142 12858 1350166 0.94 1363024 143 12862 1345943 0.95 1358805 144 13112 1343783 0.97 1356895 145 12993 1338042 0.96 1351035 146 13623 1338980 1.01 1352603 147 14144 1334969 1.05 1349113 148 14345 1326543 1.07 1340888 149 14073 1318759 1.06 1332832 150 13349 1313374 1.01 1326723 151 11342 1207226 0.93 1218568 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 35100 4832465 0.72 4867565 2 68643 5303561 1.28 5372204 3 89534 5851102 1.51 5940636 4 74534 5673045 1.30 5747579 5 70247 5696041 1.22 5766288 6 71566 5914311 1.20 5985877 7 71949 5900434 1.20 5972383 8 75656 6119011 1.22 6194667 9 74444 6116839 1.20 6191283 10 73176 6040850 1.20 6114026 11 77277 6178191 1.24 6255468 12 73442 6097779 1.19 6171221 13 69865 5851785 1.18 5921650 14 71129 5940823 1.18 6011952 15 71652 5985244 1.18 6056896 16 70550 6031400 1.16 6101950 17 67544 5904773 1.13 5972317 18 66962 5931048 1.12 5998010 19 67043 5933444 1.12 6000487 20 66918 5939854 1.11 6006772 21 65475 5967647 1.09 6033122 22 65977 5963895 1.09 6029872 23 65711 5956367 1.09 6022078 24 65397 5978762 1.08 6044159 25 65329 5960414 1.08 6025743 26 64768 5952335 1.08 6017103 27 64871 5973762 1.07 6038633 28 64299 5963705 1.07 6028004 29 64495 5965281 1.07 6029776 30 64591 5996463 1.07 6061054 31 64315 5985230 1.06 6049545 32 64319 5982078 1.06 6046397 33 64547 6014142 1.06 6078689 34 63963 5997992 1.06 6061955 35 63731 5992197 1.05 6055928 36 63400 6013955 1.04 6077355 37 63023 6002086 1.04 6065109 38 63039 5999916 1.04 6062955 39 63485 6025702 1.04 6089187 40 62315 6012731 1.03 6075046 41 62307 6011892 1.03 6074199 42 62349 6032837 1.02 6095186 43 62639 6017701 1.03 6080340 44 62304 6026297 1.02 6088601 45 62661 6042798 1.03 6105459 46 61674 6029799 1.01 6091473 47 61854 6018503 1.02 6080357 48 61680 6044837 1.01 6106517 49 62028 6028346 1.02 6090374 50 61357 6022032 1.01 6083389 51 60934 6038268 1.00 6099202 52 61363 6022144 1.01 6083507 53 61116 6022942 1.00 6084058 54 60484 6045393 0.99 6105877 55 60441 6041639 0.99 6102080 56 60532 6034185 0.99 6094717 57 60241 6055276 0.99 6115517 58 60261 6042869 0.99 6103130 59 59570 6033617 0.98 6093187 60 59794 6052702 0.98 6112496 61 59782 6031495 0.98 6091277 62 58842 6030904 0.97 6089746 63 59404 6047264 0.97 6106668 64 59116 6032871 0.97 6091987 65 58943 6032658 0.97 6091601 66 58926 6054036 0.96 6112962 67 59006 6049452 0.97 6108458 68 58570 6037198 0.96 6095768 69 59054 6056901 0.97 6115955 70 58182 6036968 0.95 6095150 71 57978 6037164 0.95 6095142 72 58260 6051355 0.95 6109615 73 58847 6031279 0.97 6090126 74 57813 6027076 0.95 6084889 75 57893 6044905 0.95 6102798 76 57871 6035092 0.95 6092963 77 57730 6031875 0.95 6089605 78 57664 6034380 0.95 6092044 79 57249 6022049 0.94 6079298 80 57316 6012917 0.94 6070233 81 57041 6025357 0.94 6082398 82 56641 6011948 0.93 6068589 83 56913 5997620 0.94 6054533 84 56552 6019213 0.93 6075765 85 56519 5997241 0.93 6053760 86 56585 5997584 0.93 6054169 87 56189 6009319 0.93 6065508 88 55761 5993201 0.92 6048962 89 56057 5980892 0.93 6036949 90 55849 5992763 0.92 6048612 91 55883 5982310 0.93 6038193 92 55449 5967905 0.92 6023354 93 55885 5977991 0.93 6033876 94 55232 5960329 0.92 6015561 95 55174 5951429 0.92 6006603 96 55014 5959667 0.91 6014681 97 55074 5943942 0.92 5999016 98 54781 5933159 0.91 5987940 99 54799 5942834 0.91 5997633 100 54454 5928554 0.91 5983008 101 54453 5909187 0.91 5963640 102 54578 5931943 0.91 5986521 103 53962 5914594 0.90 5968556 104 54398 5906754 0.91 5961152 105 54114 5909148 0.91 5963262 106 54173 5884698 0.91 5938871 107 53492 5878642 0.90 5932134 108 54346 5886369 0.91 5940715 109 53544 5862647 0.91 5916191 110 53781 5849428 0.91 5903209 111 53598 5853785 0.91 5907383 112 53511 5843155 0.91 5896666 113 53205 5823237 0.91 5876442 114 53044 5824282 0.90 5877326 115 52679 5807007 0.90 5859686 116 52915 5799859 0.90 5852774 117 52453 5800942 0.90 5853395 118 52647 5784481 0.90 5837128 119 51833 5768267 0.89 5820100 120 51854 5762791 0.89 5814645 121 52210 5739732 0.90 5791942 122 51806 5726597 0.90 5778403 123 51704 5728850 0.89 5780554 124 51481 5701595 0.89 5753076 125 51393 5682071 0.90 5733464 126 51171 5690191 0.89 5741362 127 51174 5668140 0.89 5719314 128 51289 5652277 0.90 5703566 129 51198 5649600 0.90 5700798 130 50637 5628640 0.89 5679277 131 50731 5608637 0.90 5659368 132 50678 5610359 0.90 5661037 133 50509 5582256 0.90 5632765 134 50333 5558674 0.90 5609007 135 49920 5550789 0.89 5600709 136 49725 5530261 0.89 5579986 137 49926 5516235 0.90 5566161 138 50329 5517945 0.90 5568274 139 49594 5492041 0.89 5541635 140 49620 5473232 0.90 5522852 141 49063 5457415 0.89 5506478 142 49185 5433197 0.90 5482382 143 49320 5412366 0.90 5461686 144 49837 5405456 0.91 5455293 145 49928 5383578 0.92 5433506 146 50892 5377546 0.94 5428438 147 51963 5386874 0.96 5438837 148 52484 5373288 0.97 5425772 149 51207 5346332 0.95 5397539 150 49708 5300618 0.93 5350326 151 41049 4977746 0.82 5018795 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14539 1545424 0.93 1559963 2 48108 839976 5.42 888084 3 85975 623945 12.11 709920 4 116610 778041 13.03 894651 5 120342 806965 12.98 927307 6 120913 778129 13.45 899042 7 123585 780431 13.67 904016 8 124495 757281 14.12 881776 9 138604 804823 14.69 943427 10 136503 737135 15.62 873638 11 136020 755459 15.26 891479 12 149146 775368 16.13 924514 13 141450 729305 16.24 870755 14 134146 720001 15.71 854147 15 136392 720479 15.92 856871 16 136329 705680 16.19 842009 17 142911 723978 16.49 866889 18 140095 705305 16.57 845400 19 140800 707950 16.59 848750 20 140850 706572 16.62 847422 21 140992 704865 16.67 845857 22 142219 707926 16.73 850145 23 140859 700720 16.74 841579 24 140261 700121 16.69 840382 25 141828 696693 16.91 838521 26 141185 695001 16.88 836186 27 139941 686052 16.94 825993 28 140681 690294 16.93 830975 29 139412 685488 16.90 824900 30 139123 683405 16.91 822528 31 140161 683446 17.02 823607 32 138914 679685 16.97 818599 33 138877 675137 17.06 814014 34 138683 674934 17.05 813617 35 138209 668742 17.13 806951 36 137025 664330 17.10 801355 37 137774 666935 17.12 804709 38 137104 661210 17.17 798314 39 135794 656676 17.14 792470 40 136117 659183 17.12 795300 41 135299 652522 17.17 787821 42 134553 647979 17.19 782532 43 135803 647700 17.33 783503 44 133958 645304 17.19 779262 45 133876 639709 17.31 773585 46 133943 639817 17.31 773760 47 132450 635568 17.25 768018 48 130291 628508 17.17 758799 49 130845 629975 17.20 760820 50 130114 624258 17.25 754372 51 129069 619698 17.24 748767 52 129313 616674 17.33 745987 53 128196 614306 17.27 742502 54 128152 610778 17.34 738930 55 128382 609428 17.40 737810 56 126811 603473 17.36 730284 57 125622 599540 17.32 725162 58 126487 600802 17.39 727289 59 124571 593232 17.35 717803 60 123859 588652 17.38 712511 61 124032 587867 17.42 711899 62 123442 583502 17.46 706944 63 121467 577793 17.37 699260 64 122325 580261 17.41 702586 65 121536 574576 17.46 696112 66 119819 571114 17.34 690933 67 119372 568129 17.36 687501 68 118248 564395 17.32 682643 69 118003 560903 17.38 678906 70 118010 557706 17.46 675716 71 116766 551937 17.46 668703 72 116129 548901 17.46 665030 73 115605 548507 17.41 664112 74 114741 542585 17.46 657326 75 114071 539262 17.46 653333 76 113456 537527 17.43 650983 77 112422 533949 17.39 646371 78 111995 529752 17.45 641747 79 111811 528366 17.47 640177 80 110335 524782 17.37 635117 81 110031 520825 17.44 630856 82 109939 517882 17.51 627821 83 108627 513227 17.47 621854 84 107387 509871 17.40 617258 85 107783 508890 17.48 616673 86 106425 504004 17.43 610429 87 105906 499944 17.48 605850 88 105580 497796 17.50 603376 89 104787 492970 17.53 597757 90 104008 490853 17.48 594861 91 103084 489868 17.38 592952 92 102291 484015 17.45 586306 93 101111 479518 17.41 580629 94 101589 477113 17.55 578702 95 100718 474838 17.50 575556 96 99821 470916 17.49 570737 97 99211 469153 17.46 568364 98 98683 463266 17.56 561949 99 97559 460714 17.48 558273 100 96993 460764 17.39 557757 101 96131 454684 17.45 550815 102 95760 450220 17.54 545980 103 95241 450204 17.46 545445 104 94840 445449 17.55 540289 105 94048 441414 17.56 535462 106 92574 440167 17.38 532741 107 92096 435333 17.46 527429 108 91411 429993 17.53 521404 109 91084 429472 17.50 520556 110 90639 426041 17.54 516680 111 89265 421965 17.46 511230 112 88122 420256 17.33 508378 113 88103 417156 17.44 505259 114 87794 413129 17.53 500923 115 86881 410701 17.46 497582 116 86062 407768 17.43 493830 117 85405 404775 17.42 490180 118 84596 400806 17.43 485402 119 83723 398756 17.35 482479 120 83459 394107 17.48 477566 121 83081 392880 17.46 475961 122 82395 390255 17.43 472650 123 81617 384608 17.51 466225 124 81388 383523 17.51 464911 125 80049 380164 17.39 460213 126 79317 377741 17.35 457058 127 79123 375123 17.42 454246 128 78707 373417 17.41 452124 129 77767 370006 17.37 447773 130 77153 366103 17.41 443256 131 76261 362761 17.37 439022 132 75297 359819 17.31 435116 133 75492 358493 17.40 433985 134 74064 353246 17.33 427310 135 73648 350741 17.35 424389 136 73043 349795 17.27 422838 137 72140 346637 17.23 418777 138 71894 342339 17.36 414233 139 72031 340235 17.47 412266 140 71049 338319 17.36 409368 141 69663 334390 17.24 404053 142 69763 330485 17.43 400248 143 68962 327568 17.39 396530 144 67754 324295 17.28 392049 145 67651 322089 17.36 389740 146 67187 318856 17.40 386043 147 65994 317095 17.23 383089 148 65647 314420 17.27 380067 149 64890 307444 17.43 372334 150 62450 269933 18.79 332383 151 50454 0 100.00 50454 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 7144 1130130 0.63 1137274 2 18876 1768338 1.06 1787214 3 16907 1168554 1.43 1185461 4 21540 1080001 1.96 1101541 5 14683 1314179 1.10 1328862 6 13737 1296681 1.05 1310418 7 13204 1212553 1.08 1225757 8 13799 1230166 1.11 1243965 9 14203 1274719 1.10 1288922 10 13651 1202867 1.12 1216518 11 12439 1181304 1.04 1193743 12 13167 1217337 1.07 1230504 13 13032 1199670 1.07 1212702 14 12891 1211919 1.05 1224810 15 12271 1150135 1.06 1162406 16 12273 1148497 1.06 1160770 17 12406 1161649 1.06 1174055 18 12742 1183829 1.06 1196571 19 12052 1146582 1.04 1158634 20 12325 1148245 1.06 1160570 21 12292 1147955 1.06 1160247 22 12189 1146057 1.05 1158246 23 12274 1143633 1.06 1155907 24 11781 1141198 1.02 1152979 25 12079 1138268 1.05 1150347 26 12157 1136735 1.06 1148892 27 11803 1133821 1.03 1145624 28 11791 1124723 1.04 1136514 29 11577 1125178 1.02 1136755 30 11535 1121514 1.02 1133049 31 11767 1111904 1.05 1123671 32 11737 1112908 1.04 1124645 33 11575 1113139 1.03 1124714 34 11806 1100700 1.06 1112506 35 11389 1101028 1.02 1112417 36 11312 1100041 1.02 1111353 37 11458 1092488 1.04 1103946 38 11386 1091601 1.03 1102987 39 11055 1082401 1.01 1093456 40 11192 1075997 1.03 1087189 41 11216 1075646 1.03 1086862 42 10972 1070208 1.01 1081180 43 10962 1065301 1.02 1076263 44 11024 1063894 1.03 1074918 45 10912 1056986 1.02 1067898 46 10727 1048091 1.01 1058818 47 10728 1049075 1.01 1059803 48 10684 1043229 1.01 1053913 49 10556 1034938 1.01 1045494 50 10555 1029692 1.01 1040247 51 10246 1024363 0.99 1034609 52 10067 1021693 0.98 1031760 53 10225 1013926 1.00 1024151 54 10101 1011589 0.99 1021690 55 9886 1003147 0.98 1013033 56 9977 999105 0.99 1009082 57 9814 997688 0.97 1007502 58 9684 987977 0.97 997661 59 9607 982580 0.97 992187 60 9525 976994 0.97 986519 61 9563 971045 0.98 980608 62 9450 967626 0.97 977076 63 9286 962581 0.96 971867 64 9282 955757 0.96 965039 65 9151 953141 0.95 962292 66 9243 945484 0.97 954727 67 8971 936865 0.95 945836 68 9053 934640 0.96 943693 69 8951 928906 0.95 937857 70 8721 921714 0.94 930435 71 8669 917311 0.94 925980 72 8616 912920 0.93 921536 73 8519 906946 0.93 915465 74 8627 904294 0.94 912921 75 8424 897498 0.93 905922 76 8368 890068 0.93 898436 77 8347 886536 0.93 894883 78 8092 883284 0.91 891376 79 8171 874459 0.93 882630 80 8023 871208 0.91 879231 81 8113 865810 0.93 873923 82 7987 859319 0.92 867306 83 7962 855147 0.92 863109 84 7674 849702 0.90 857376 85 7770 840646 0.92 848416 86 7778 841022 0.92 848800 87 7682 831199 0.92 838881 88 7377 828798 0.88 836175 89 7581 822763 0.91 830344 90 7748 817626 0.94 825374 91 7301 809587 0.89 816888 92 7261 807091 0.89 814352 93 7174 801752 0.89 808926 94 7190 796217 0.89 803407 95 7107 791634 0.89 798741 96 7003 786784 0.88 793787 97 7095 775843 0.91 782938 98 6882 774208 0.88 781090 99 6819 769615 0.88 776434 100 6810 761181 0.89 767991 101 6724 759784 0.88 766508 102 6575 753319 0.87 759894 103 6666 744323 0.89 750989 104 6775 740089 0.91 746864 105 6412 735875 0.86 742287 106 6445 728964 0.88 735409 107 6335 725391 0.87 731726 108 6331 720488 0.87 726819 109 6374 712533 0.89 718907 110 6214 711221 0.87 717435 111 6049 703974 0.85 710023 112 5945 698086 0.84 704031 113 5992 692745 0.86 698737 114 6031 690824 0.87 696855 115 5891 683927 0.85 689818 116 5807 678001 0.85 683808 117 5664 672402 0.84 678066 118 5677 667511 0.84 673188 119 5670 662779 0.85 668449 120 5666 659089 0.85 664755 121 5566 653756 0.84 659322 122 5443 650595 0.83 656038 123 5603 644325 0.86 649928 124 5525 638476 0.86 644001 125 5452 633644 0.85 639096 126 5320 629513 0.84 634833 127 5269 622564 0.84 627833 128 5285 620566 0.84 625851 129 5201 614316 0.84 619517 130 5137 607780 0.84 612917 131 5111 603141 0.84 608252 132 5077 597781 0.84 602858 133 4907 593110 0.82 598017 134 5041 590018 0.85 595059 135 4865 584691 0.83 589556 136 4831 580126 0.83 584957 137 4992 577151 0.86 582143 138 4815 570435 0.84 575250 139 4675 564122 0.82 568797 140 4642 558798 0.82 563440 141 4730 554689 0.85 559419 142 4484 549853 0.81 554337 143 4595 546453 0.83 551048 144 4449 540018 0.82 544467 145 4768 533508 0.89 538276 146 4566 530755 0.85 535321 147 4426 526511 0.83 530937 148 4365 517958 0.84 522323 149 4380 508892 0.85 513272 150 4014 456782 0.87 460796 151 2274 0 100.00 2274 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 30810 5142850 0.60 5173660 2 51823 4982150 1.03 5033973 3 59530 4979554 1.18 5039084 4 62843 5369756 1.16 5432599 5 55578 5387239 1.02 5442817 6 54964 5415354 1.00 5470318 7 55491 5326289 1.03 5381780 8 53370 5164191 1.02 5217561 9 54475 5270238 1.02 5324713 10 51443 4903212 1.04 4954655 11 50114 4901227 1.01 4951341 12 50074 4883575 1.01 4933649 13 49270 4717641 1.03 4766911 14 49680 4814112 1.02 4863792 15 49578 4781786 1.03 4831364 16 47875 4669439 1.01 4717314 17 48114 4700242 1.01 4748356 18 47898 4715880 1.01 4763778 19 48603 4746519 1.01 4795122 20 48259 4724796 1.01 4773055 21 48927 4710878 1.03 4759805 22 47915 4701313 1.01 4749228 23 48199 4670454 1.02 4718653 24 47325 4651919 1.01 4699244 25 47752 4649100 1.02 4696852 26 47629 4615533 1.02 4663162 27 47824 4615733 1.03 4663557 28 47808 4605408 1.03 4653216 29 47332 4581752 1.02 4629084 30 46742 4570427 1.01 4617169 31 46304 4551708 1.01 4598012 32 46330 4523211 1.01 4569541 33 45863 4508307 1.01 4554170 34 45966 4492115 1.01 4538081 35 45720 4462386 1.01 4508106 36 45365 4449664 1.01 4495029 37 45145 4446076 1.01 4491221 38 45025 4413611 1.01 4458636 39 44357 4391909 1.00 4436266 40 44053 4382672 1.00 4426725 41 43722 4342796 1.00 4386518 42 43486 4335088 0.99 4378574 43 43567 4316900 1.00 4360467 44 43138 4287809 1.00 4330947 45 42450 4264414 0.99 4306864 46 41966 4249742 0.98 4291708 47 41693 4230419 0.98 4272112 48 41383 4204296 0.97 4245679 49 41340 4187646 0.98 4228986 50 40911 4160909 0.97 4201820 51 40086 4133187 0.96 4173273 52 40314 4124065 0.97 4164379 53 39791 4102921 0.96 4142712 54 38937 4076985 0.95 4115922 55 39194 4069268 0.95 4108462 56 38656 4039832 0.95 4078488 57 38502 4012902 0.95 4051404 58 38303 4002663 0.95 4040966 59 37833 3959987 0.95 3997820 60 37432 3941992 0.94 3979424 61 37271 3918889 0.94 3956160 62 36823 3891331 0.94 3928154 63 36292 3876995 0.93 3913287 64 35873 3857537 0.92 3893410 65 35711 3836390 0.92 3872101 66 35405 3817653 0.92 3853058 67 35072 3801395 0.91 3836467 68 34903 3766393 0.92 3801296 69 34662 3747027 0.92 3781689 70 34379 3722656 0.92 3757035 71 34039 3696922 0.91 3730961 72 33455 3671628 0.90 3705083 73 33562 3651723 0.91 3685285 74 32772 3632888 0.89 3665660 75 32530 3608502 0.89 3641032 76 32152 3593650 0.89 3625802 77 32093 3566525 0.89 3598618 78 31911 3543019 0.89 3574930 79 31529 3524141 0.89 3555670 80 31290 3503033 0.89 3534323 81 30814 3480465 0.88 3511279 82 30689 3465420 0.88 3496109 83 30656 3439161 0.88 3469817 84 29930 3420370 0.87 3450300 85 29617 3402362 0.86 3431979 86 29480 3376132 0.87 3405612 87 28935 3356528 0.85 3385463 88 29024 3335330 0.86 3364354 89 28448 3310763 0.85 3339211 90 28183 3286236 0.85 3314419 91 28267 3273275 0.86 3301542 92 27843 3246589 0.85 3274432 93 27189 3226857 0.84 3254046 94 27024 3209329 0.84 3236353 95 26768 3187536 0.83 3214304 96 26587 3168921 0.83 3195508 97 26321 3151036 0.83 3177357 98 26020 3123670 0.83 3149690 99 25833 3100568 0.83 3126401 100 25641 3078997 0.83 3104638 101 25206 3057604 0.82 3082810 102 25090 3039193 0.82 3064283 103 24926 3018737 0.82 3043663 104 24319 3001091 0.80 3025410 105 24361 2978646 0.81 3003007 106 24036 2962103 0.80 2986139 107 23829 2933177 0.81 2957006 108 23651 2913567 0.81 2937218 109 23357 2896445 0.80 2919802 110 23215 2871437 0.80 2894652 111 22995 2853801 0.80 2876796 112 22684 2837606 0.79 2860290 113 22514 2813020 0.79 2835534 114 22122 2793887 0.79 2816009 115 22094 2774883 0.79 2796977 116 21939 2755863 0.79 2777802 117 21455 2731560 0.78 2753015 118 21505 2714704 0.79 2736209 119 21208 2691540 0.78 2712748 120 20870 2669585 0.78 2690455 121 20627 2651671 0.77 2672298 122 20406 2625644 0.77 2646050 123 20484 2608988 0.78 2629472 124 20305 2591739 0.78 2612044 125 20173 2571138 0.78 2591311 126 19796 2554674 0.77 2574470 127 19773 2536673 0.77 2556446 128 19759 2515516 0.78 2535275 129 19305 2492798 0.77 2512103 130 19250 2476749 0.77 2495999 131 19030 2454093 0.77 2473123 132 18957 2429853 0.77 2448810 133 18637 2412685 0.77 2431322 134 18631 2393527 0.77 2412158 135 18503 2379014 0.77 2397517 136 18055 2362606 0.76 2380661 137 18208 2342400 0.77 2360608 138 18009 2320498 0.77 2338507 139 17853 2304596 0.77 2322449 140 17746 2282150 0.77 2299896 141 17476 2261425 0.77 2278901 142 17338 2242234 0.77 2259572 143 17215 2223286 0.77 2240501 144 17198 2203528 0.77 2220726 145 16876 2186813 0.77 2203689 146 16743 2164949 0.77 2181692 147 16731 2148435 0.77 2165166 148 16672 2123790 0.78 2140462 149 16541 2080664 0.79 2097205 150 14966 1875795 0.79 1890761 151 7628 0 100.00 7628