ERR10684013.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 51513091 lines in total Total number of methylation call strings processed: 103026182 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1945247352 Total methylated C's in CpG context: 38851744 Total methylated C's in CHG context: 1335546 Total methylated C's in CHH context: 4715594 Total C to T conversions in CpG context: 197339582 Total C to T conversions in CHG context: 330588866 Total C to T conversions in CHH context: 1372416020 C methylated in CpG context: 16.4% C methylated in non-CpG context: 0.4%