ERR10684011.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 26096881 lines in total Total number of methylation call strings processed: 52193762 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1064569309 Total methylated C's in CpG context: 34803232 Total methylated C's in CHG context: 17095063 Total methylated C's in CHH context: 67504760 Total C to T conversions in CpG context: 109576372 Total C to T conversions in CHG context: 179108402 Total C to T conversions in CHH context: 656481480 C methylated in CpG context: 24.1% C methylated in non-CpG context: 9.2%