ERR10684010.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 40665896 lines in total Total number of methylation call strings processed: 81331792 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1582810410 Total methylated C's in CpG context: 36170136 Total methylated C's in CHG context: 3292316 Total methylated C's in CHH context: 13121461 Total C to T conversions in CpG context: 160496146 Total C to T conversions in CHG context: 272618470 Total C to T conversions in CHH context: 1097111881 C methylated in CpG context: 18.4% C methylated in non-CpG context: 1.2%