ERR10684007.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 38986115 lines in total Total number of methylation call strings processed: 77972230 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1231174407 Total methylated C's in CpG context: 28173648 Total methylated C's in CHG context: 17513989 Total methylated C's in CHH context: 71045413 Total C to T conversions in CpG context: 134339968 Total C to T conversions in CHG context: 201745593 Total C to T conversions in CHH context: 778355796 C methylated in CpG context: 17.3% C methylated in non-CpG context: 8.3%