CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 105247 419821 20.04 525068 2 145273 751850 16.19 897123 3 137715 878264 13.55 1015979 4 157328 793160 16.55 950488 5 149347 806997 15.62 956344 6 153759 827170 15.67 980929 7 157900 815158 16.23 973058 8 161444 875130 15.57 1036574 9 156581 856239 15.46 1012820 10 154935 866858 15.16 1021793 11 158723 868905 15.45 1027628 12 150345 815155 15.57 965500 13 150087 812642 15.59 962729 14 149179 797738 15.75 946917 15 149630 790001 15.92 939631 16 151483 803853 15.86 955336 17 152973 822528 15.68 975501 18 153943 842350 15.45 996293 19 156787 852190 15.54 1008977 20 157743 857865 15.53 1015608 21 155571 847705 15.51 1003276 22 154735 839073 15.57 993808 23 157183 837826 15.80 995009 24 154309 813362 15.95 967671 25 152414 798843 16.02 951257 26 155167 819963 15.91 975130 27 156313 842112 15.66 998425 28 155628 849521 15.48 1005149 29 159176 866584 15.52 1025760 30 158308 866171 15.45 1024479 31 157525 867663 15.37 1025188 32 158357 858973 15.57 1017330 33 157751 849794 15.66 1007545 34 157642 837968 15.83 995610 35 158259 834540 15.94 992799 36 158792 842286 15.86 1001078 37 158182 851614 15.66 1009796 38 159249 868176 15.50 1027425 39 159297 872971 15.43 1032268 40 160439 876082 15.48 1036521 41 161246 886378 15.39 1047624 42 159464 882033 15.31 1041497 43 159528 873161 15.45 1032689 44 161692 868298 15.70 1029990 45 158824 854002 15.68 1012826 46 160300 854427 15.80 1014727 47 161197 873640 15.58 1034837 48 159721 879838 15.36 1039559 49 161467 886400 15.41 1047867 50 162266 895659 15.34 1057925 51 160975 886739 15.36 1047714 52 160182 883296 15.35 1043478 53 162169 885979 15.47 1048148 54 160644 882148 15.41 1042792 55 161888 872822 15.65 1034710 56 160616 873273 15.54 1033889 57 160401 875158 15.49 1035559 58 160778 883290 15.40 1044068 59 160471 887246 15.32 1047717 60 158785 890049 15.14 1048834 61 161524 893866 15.30 1055390 62 160663 894688 15.22 1055351 63 159502 889715 15.20 1049217 64 160734 885798 15.36 1046532 65 160249 876610 15.46 1036859 66 158664 870318 15.42 1028982 67 160044 878814 15.41 1038858 68 158650 885500 15.19 1044150 69 156021 882005 15.03 1038026 70 156507 882096 15.07 1038603 71 159162 892623 15.13 1051785 72 157104 888057 15.03 1045161 73 155990 879844 15.06 1035834 74 154478 869153 15.09 1023631 75 154086 859970 15.20 1014056 76 154326 858053 15.24 1012379 77 153283 863563 15.07 1016846 78 152968 869437 14.96 1022405 79 152444 876409 14.82 1028853 80 152052 883199 14.69 1035251 81 149774 872534 14.65 1022308 82 150788 869554 14.78 1020342 83 150315 866383 14.78 1016698 84 148105 858072 14.72 1006177 85 147115 848445 14.78 995560 86 145965 840501 14.80 986466 87 144317 832719 14.77 977036 88 144066 837224 14.68 981290 89 144056 850084 14.49 994140 90 142378 849983 14.35 992361 91 142613 852835 14.33 995448 92 141859 849726 14.31 991585 93 140430 842993 14.28 983423 94 140279 833362 14.41 973641 95 137476 822512 14.32 959988 96 135942 807958 14.40 943900 97 135062 802508 14.41 937570 98 134387 807760 14.26 942147 99 132333 810556 14.03 942889 100 131855 813808 13.94 945663 101 131355 814902 13.88 946257 102 129916 806408 13.88 936324 103 128973 800711 13.87 929684 104 128658 796855 13.90 925513 105 126846 785172 13.91 912018 106 124681 769661 13.94 894342 107 122595 764197 13.82 886792 108 121165 756685 13.80 877850 109 120873 757041 13.77 877914 110 119133 764911 13.48 884044 111 118918 765387 13.45 884305 112 117541 760184 13.39 877725 113 116373 754499 13.36 870872 114 114239 744311 13.31 858550 115 113861 734272 13.42 848133 116 111724 726781 13.32 838505 117 109884 716806 13.29 826690 118 108145 708935 13.24 817080 119 106594 708689 13.07 815283 120 105776 706605 13.02 812381 121 104771 704735 12.94 809506 122 103311 701631 12.83 804942 123 102530 694221 12.87 796751 124 100744 686376 12.80 787120 125 99116 676558 12.78 775674 126 96550 661006 12.74 757556 127 95071 654758 12.68 749829 128 93200 648513 12.57 741713 129 91400 639897 12.50 731297 130 90254 634862 12.45 725116 131 88384 631398 12.28 719782 132 86581 623970 12.19 710551 133 86254 616740 12.27 702994 134 84685 610467 12.18 695152 135 83220 600444 12.17 683664 136 81578 593752 12.08 675330 137 79850 586104 11.99 665954 138 79015 576466 12.05 655481 139 77098 569735 11.92 646833 140 75406 563257 11.81 638663 141 74393 554059 11.84 628452 142 72615 545426 11.75 618041 143 71257 537867 11.70 609124 144 69445 528300 11.62 597745 145 68398 520815 11.61 589213 146 67042 512959 11.56 580001 147 66280 508088 11.54 574368 148 65180 498571 11.56 563751 149 63228 491141 11.41 554369 150 61391 481171 11.32 542562 151 55548 440358 11.20 495906 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 7630 988497 0.77 996127 2 34241 1273554 2.62 1307795 3 35729 1453306 2.40 1489035 4 33278 1260277 2.57 1293555 5 32706 1194185 2.67 1226891 6 32643 1222467 2.60 1255110 7 36209 1269242 2.77 1305451 8 36884 1278754 2.80 1315638 9 35941 1278301 2.73 1314242 10 36292 1267767 2.78 1304059 11 37179 1273990 2.84 1311169 12 36144 1263400 2.78 1299544 13 36538 1244586 2.85 1281124 14 36554 1254968 2.83 1291522 15 36902 1258245 2.85 1295147 16 37216 1246148 2.90 1283364 17 37736 1246865 2.94 1284601 18 38547 1258791 2.97 1297338 19 39317 1257389 3.03 1296706 20 39421 1258604 3.04 1298025 21 39154 1263459 3.01 1302613 22 39881 1280342 3.02 1320223 23 39023 1287160 2.94 1326183 24 39302 1292243 2.95 1331545 25 39179 1289665 2.95 1328844 26 39565 1295997 2.96 1335562 27 39653 1293750 2.97 1333403 28 39934 1286253 3.01 1326187 29 40642 1293965 3.05 1334607 30 40652 1297361 3.04 1338013 31 40688 1304358 3.03 1345046 32 40611 1315711 2.99 1356322 33 39874 1324645 2.92 1364519 34 40211 1325766 2.94 1365977 35 40417 1343416 2.92 1383833 36 39692 1338594 2.88 1378286 37 40108 1320107 2.95 1360215 38 40365 1325466 2.96 1365831 39 40559 1328412 2.96 1368971 40 41065 1327394 3.00 1368459 41 40814 1340071 2.96 1380885 42 40994 1346676 2.95 1387670 43 40999 1355311 2.94 1396310 44 40487 1375873 2.86 1416360 45 39668 1371878 2.81 1411546 46 39490 1364559 2.81 1404049 47 39389 1363417 2.81 1402806 48 39750 1352921 2.85 1392671 49 39882 1341026 2.89 1380908 50 40284 1342415 2.91 1382699 51 40382 1346707 2.91 1387089 52 40626 1351682 2.92 1392308 53 40536 1367291 2.88 1407827 54 39973 1379455 2.82 1419428 55 39676 1383150 2.79 1422826 56 39708 1382080 2.79 1421788 57 38642 1373211 2.74 1411853 58 38868 1356529 2.79 1395397 59 39361 1349703 2.83 1389064 60 39916 1347580 2.88 1387496 61 39465 1348925 2.84 1388390 62 39651 1366571 2.82 1406222 63 39993 1376792 2.82 1416785 64 39112 1378197 2.76 1417309 65 39096 1391066 2.73 1430162 66 39028 1392148 2.73 1431176 67 38895 1378307 2.74 1417202 68 38241 1366654 2.72 1404895 69 38553 1348285 2.78 1386838 70 38336 1339335 2.78 1377671 71 38730 1357667 2.77 1396397 72 38666 1354927 2.77 1393593 73 38320 1347516 2.77 1385836 74 38471 1364932 2.74 1403403 75 38019 1372645 2.70 1410664 76 37556 1366505 2.67 1404061 77 37387 1368719 2.66 1406106 78 37092 1357784 2.66 1394876 79 37356 1342989 2.71 1380345 80 37859 1342960 2.74 1380819 81 37117 1329475 2.72 1366592 82 37467 1324340 2.75 1361807 83 37097 1332815 2.71 1369912 84 36300 1327384 2.66 1363684 85 36152 1329281 2.65 1365433 86 35607 1327545 2.61 1363152 87 35072 1318080 2.59 1353152 88 35253 1310709 2.62 1345962 89 35525 1307847 2.64 1343372 90 35738 1293737 2.69 1329475 91 35900 1294408 2.70 1330308 92 35602 1294845 2.68 1330447 93 35303 1285620 2.67 1320923 94 34861 1278381 2.65 1313242 95 34385 1285518 2.61 1319903 96 33729 1270881 2.59 1304610 97 33374 1261897 2.58 1295271 98 33688 1256626 2.61 1290314 99 33461 1248676 2.61 1282137 100 33366 1237267 2.63 1270633 101 33200 1233688 2.62 1266888 102 33460 1225587 2.66 1259047 103 33198 1222783 2.64 1255981 104 32707 1222705 2.61 1255412 105 32467 1213351 2.61 1245818 106 32337 1204084 2.62 1236421 107 31743 1193480 2.59 1225223 108 30864 1178191 2.55 1209055 109 31321 1172424 2.60 1203745 110 31374 1170015 2.61 1201389 111 31026 1158532 2.61 1189558 112 31114 1153870 2.63 1184984 113 30631 1150480 2.59 1181111 114 30373 1135943 2.60 1166316 115 29923 1126326 2.59 1156249 116 29668 1122223 2.58 1151891 117 29064 1109248 2.55 1138312 118 28799 1092336 2.57 1121135 119 28655 1086680 2.57 1115335 120 28507 1073880 2.59 1102387 121 28395 1066034 2.59 1094429 122 28273 1061881 2.59 1090154 123 27912 1046808 2.60 1074720 124 27203 1032286 2.57 1059489 125 26886 1022683 2.56 1049569 126 26584 1005332 2.58 1031916 127 25774 992853 2.53 1018627 128 25882 979663 2.57 1005545 129 25429 967177 2.56 992606 130 25397 955563 2.59 980960 131 25306 947601 2.60 972907 132 24924 937884 2.59 962808 133 24465 929367 2.56 953832 134 24029 917943 2.55 941972 135 23902 902181 2.58 926083 136 23445 889292 2.57 912737 137 23346 877410 2.59 900756 138 22805 861843 2.58 884648 139 22576 849425 2.59 872001 140 22393 837179 2.61 859572 141 22095 824502 2.61 846597 142 21802 810134 2.62 831936 143 21568 800851 2.62 822419 144 21079 786480 2.61 807559 145 21272 776241 2.67 797513 146 21351 764602 2.72 785953 147 22056 751340 2.85 773396 148 22044 737806 2.90 759850 149 21611 723851 2.90 745462 150 19850 702613 2.75 722463 151 17454 663077 2.56 680531 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 36119 4248719 0.84 4284838 2 149948 5260948 2.77 5410896 3 179106 5310957 3.26 5490063 4 131820 4353759 2.94 4485579 5 121292 4262877 2.77 4384169 6 126374 4563931 2.69 4690305 7 136886 4718200 2.82 4855086 8 145039 4929817 2.86 5074856 9 143631 4964084 2.81 5107715 10 143586 4995003 2.79 5138589 11 153386 5112497 2.91 5265883 12 145072 4951289 2.85 5096361 13 146021 4876869 2.91 5022890 14 145414 4825692 2.93 4971106 15 144227 4743467 2.95 4887694 16 145396 4721276 2.99 4866672 17 147618 4744627 3.02 4892245 18 152333 4807590 3.07 4959923 19 157064 4879443 3.12 5036507 20 161211 4993614 3.13 5154825 21 162040 5030180 3.12 5192220 22 163496 5010420 3.16 5173916 23 158698 5018001 3.07 5176699 24 155510 4961670 3.04 5117180 25 152853 4855549 3.05 5008402 26 151918 4814935 3.06 4966853 27 154187 4838303 3.09 4992490 28 159053 4871590 3.16 5030643 29 162787 4994228 3.16 5157015 30 164523 5065549 3.15 5230072 31 167488 5113015 3.17 5280503 32 166129 5133125 3.13 5299254 33 163683 5091550 3.11 5255233 34 159229 5038063 3.06 5197292 35 155581 5000273 3.02 5155854 36 153389 4943138 3.01 5096527 37 155924 4931299 3.07 5087223 38 160244 5002927 3.10 5163171 39 161812 5052770 3.10 5214582 40 164362 5117007 3.11 5281369 41 164844 5185377 3.08 5350221 42 162048 5170755 3.04 5332803 43 161841 5146160 3.05 5308001 44 158157 5145192 2.98 5303349 45 154131 5073302 2.95 5227433 46 151696 4997080 2.95 5148776 47 153256 5004064 2.97 5157320 48 154882 4986129 3.01 5141011 49 158102 5028880 3.05 5186982 50 160278 5130353 3.03 5290631 51 160551 5135648 3.03 5296199 52 161106 5141590 3.04 5302696 53 159344 5174429 2.99 5333773 54 156334 5151348 2.95 5307682 55 155438 5122728 2.94 5278166 56 154337 5106883 2.93 5261220 57 152443 5058864 2.93 5211307 58 153213 5055040 2.94 5208253 59 155397 5076696 2.97 5232093 60 157452 5112160 2.99 5269612 61 159781 5180318 2.99 5340099 62 158552 5224114 2.95 5382666 63 156394 5197364 2.92 5353758 64 154027 5159385 2.90 5313412 65 150886 5145751 2.85 5296637 66 149447 5087644 2.85 5237091 67 150054 5080236 2.87 5230290 68 151011 5111713 2.87 5262724 69 150611 5081114 2.88 5231725 70 152465 5099843 2.90 5252308 71 154075 5175827 2.89 5329902 72 153364 5182032 2.87 5335396 73 153444 5159738 2.89 5313182 74 150373 5140905 2.84 5291278 75 146692 5069045 2.81 5215737 76 144978 5030141 2.80 5175119 77 144381 5015908 2.80 5160289 78 143906 4995972 2.80 5139878 79 146115 5010796 2.83 5156911 80 147742 5053753 2.84 5201495 81 148901 5056057 2.86 5204958 82 148951 5085238 2.85 5234189 83 148039 5102877 2.82 5250916 84 145425 5045029 2.80 5190454 85 142965 5000279 2.78 5143244 86 140060 4961033 2.75 5101093 87 138333 4890299 2.75 5028632 88 137767 4864347 2.75 5002114 89 138972 4890804 2.76 5029776 90 140313 4905146 2.78 5045459 91 143165 4958376 2.81 5101541 92 141941 4976259 2.77 5118200 93 140513 4952133 2.76 5092646 94 138974 4929037 2.74 5068011 95 137263 4885105 2.73 5022368 96 133049 4802534 2.70 4935583 97 131616 4748351 2.70 4879967 98 130821 4734100 2.69 4864921 99 130641 4712823 2.70 4843464 100 132423 4718688 2.73 4851111 101 134110 4755498 2.74 4889608 102 133944 4750341 2.74 4884285 103 132718 4728725 2.73 4861443 104 131228 4714919 2.71 4846147 105 128560 4650874 2.69 4779434 106 126295 4588588 2.68 4714883 107 124435 4540738 2.67 4665173 108 123081 4459909 2.69 4582990 109 122666 4428173 2.70 4550839 110 123171 4441022 2.70 4564193 111 123149 4435728 2.70 4558877 112 123873 4435763 2.72 4559636 113 123208 4434262 2.70 4557470 114 120320 4378785 2.67 4499105 115 119920 4327790 2.70 4447710 116 117538 4276959 2.67 4394497 117 115540 4211621 2.67 4327161 118 113685 4165179 2.66 4278864 119 113340 4134168 2.67 4247508 120 113285 4098898 2.69 4212183 121 113431 4088771 2.70 4202202 122 112647 4078952 2.69 4191599 123 111023 4039198 2.68 4150221 124 109874 3991832 2.68 4101706 125 108654 3950608 2.68 4059262 126 105973 3882565 2.66 3988538 127 104403 3826614 2.66 3931017 128 102134 3784207 2.63 3886341 129 101353 3728288 2.65 3829641 130 100880 3695917 2.66 3796797 131 100169 3668855 2.66 3769024 132 98860 3631905 2.65 3730765 133 97707 3588391 2.65 3686098 134 96422 3547999 2.65 3644421 135 94670 3487202 2.64 3581872 136 93930 3441090 2.66 3535020 137 92463 3391769 2.65 3484232 138 90898 3334155 2.65 3425053 139 89713 3289751 2.65 3379464 140 88881 3249403 2.66 3338284 141 87811 3198051 2.67 3285862 142 86196 3147705 2.67 3233901 143 85524 3114393 2.67 3199917 144 84737 3056695 2.70 3141432 145 83814 3005803 2.71 3089617 146 83867 2974078 2.74 3057945 147 85145 2924436 2.83 3009581 148 84906 2880140 2.86 2965046 149 82868 2829404 2.85 2912272 150 79716 2761849 2.81 2841565 151 68070 2623605 2.53 2691675 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 8930 390676 2.23 399606 2 17678 384564 4.39 402242 3 32382 416671 7.21 449053 4 39515 458098 7.94 497613 5 39049 445968 8.05 485017 6 35447 435501 7.53 470948 7 36503 434572 7.75 471075 8 36254 421051 7.93 457305 9 38577 442624 8.02 481201 10 39107 417322 8.57 456429 11 38901 412772 8.61 451673 12 39911 403705 9.00 443616 13 36960 369760 9.09 406720 14 36655 363308 9.16 399963 15 35291 348967 9.18 384258 16 35411 337572 9.49 372983 17 35188 336174 9.48 371362 18 35185 332993 9.56 368178 19 35123 330055 9.62 365178 20 35063 326121 9.71 361184 21 34625 318449 9.81 353074 22 34025 307958 9.95 341983 23 33417 300077 10.02 333494 24 33484 292771 10.26 326255 25 31683 279787 10.17 311470 26 31416 269954 10.42 301370 27 31198 269432 10.38 300630 28 31041 267863 10.38 298904 29 30677 264846 10.38 295523 30 30829 261792 10.54 292621 31 29881 255327 10.48 285208 32 29482 250787 10.52 280269 33 29273 243335 10.74 272608 34 28430 234444 10.82 262874 35 28193 227228 11.04 255421 36 27336 222971 10.92 250307 37 27247 219257 11.05 246504 38 26670 217053 10.94 243723 39 26911 215935 11.08 242846 40 25894 212345 10.87 238239 41 25930 207125 11.13 233055 42 25619 204871 11.12 230490 43 25050 199566 11.15 224616 44 24629 194811 11.22 219440 45 24209 188932 11.36 213141 46 23521 183083 11.38 206604 47 23506 179569 11.58 203075 48 23126 179529 11.41 202655 49 22623 176259 11.38 198882 50 22790 175243 11.51 198033 51 22284 172097 11.46 194381 52 21946 168067 11.55 190013 53 21775 164883 11.67 186658 54 21451 162157 11.68 183608 55 21101 157109 11.84 178210 56 20879 153649 11.96 174528 57 20302 150987 11.85 171289 58 19885 148592 11.80 168477 59 19826 147088 11.88 166914 60 19526 145003 11.87 164529 61 19027 142239 11.80 161266 62 18881 140668 11.83 159549 63 18934 138787 12.00 157721 64 18740 134794 12.21 153534 65 18300 133314 12.07 151614 66 17884 129308 12.15 147192 67 17678 125635 12.34 143313 68 17703 125890 12.33 143593 69 17247 124413 12.17 141660 70 16968 121600 12.25 138568 71 16645 119607 12.22 136252 72 16811 118891 12.39 135702 73 16355 117453 12.22 133808 74 16365 114739 12.48 131104 75 15813 111187 12.45 127000 76 15317 108361 12.38 123678 77 15467 106959 12.63 122426 78 15259 105523 12.63 120782 79 14914 104329 12.51 119243 80 14729 103583 12.45 118312 81 14642 102987 12.45 117629 82 14365 100633 12.49 114998 83 14066 98591 12.49 112657 84 14256 96272 12.90 110528 85 13868 95042 12.73 108910 86 13634 93224 12.76 106858 87 13373 90448 12.88 103821 88 13235 88533 13.01 101768 89 12711 88116 12.61 100827 90 12952 87574 12.88 100526 91 12784 86740 12.85 99524 92 12409 85304 12.70 97713 93 12319 84552 12.72 96871 94 12155 82410 12.85 94565 95 12036 80927 12.95 92963 96 11730 78910 12.94 90640 97 11336 76545 12.90 87881 98 11433 75498 13.15 86931 99 11139 74692 12.98 85831 100 10840 73964 12.78 84804 101 10889 73128 12.96 84017 102 10649 72447 12.82 83096 103 10480 70085 13.01 80565 104 10204 69962 12.73 80166 105 10095 68459 12.85 78554 106 9999 66792 13.02 76791 107 9849 65238 13.12 75087 108 9596 63495 13.13 73091 109 9433 62839 13.05 72272 110 9288 61885 13.05 71173 111 9348 61277 13.24 70625 112 9104 60745 13.03 69849 113 8873 59749 12.93 68622 114 8969 59051 13.19 68020 115 8645 58064 12.96 66709 116 8565 55971 13.27 64536 117 8526 55909 13.23 64435 118 8166 54082 13.12 62248 119 8071 53197 13.17 61268 120 7985 52553 13.19 60538 121 7825 52090 13.06 59915 122 7728 51527 13.04 59255 123 7630 50343 13.16 57973 124 7442 49993 12.96 57435 125 7510 48296 13.46 55806 126 7315 47815 13.27 55130 127 7193 46155 13.48 53348 128 6885 45494 13.14 52379 129 6919 44486 13.46 51405 130 6665 44120 13.12 50785 131 6649 43134 13.36 49783 132 6538 42559 13.32 49097 133 6618 41786 13.67 48404 134 6237 40996 13.20 47233 135 6088 40643 13.03 46731 136 6115 39769 13.33 45884 137 6045 39183 13.37 45228 138 6034 38627 13.51 44661 139 5768 37426 13.35 43194 140 5796 36979 13.55 42775 141 5606 36467 13.32 42073 142 5438 35446 13.30 40884 143 5211 34983 12.96 40194 144 5299 34453 13.33 39752 145 5035 33821 12.96 38856 146 5196 33346 13.48 38542 147 4889 32097 13.22 36986 148 4920 31841 13.38 36761 149 4838 30597 13.65 35435 150 4578 26935 14.53 31513 151 3984 0 100.00 3984 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 17699 730624 2.37 748323 2 15262 507395 2.92 522657 3 20815 609541 3.30 630356 4 33011 588703 5.31 621714 5 20508 721922 2.76 742430 6 17431 647155 2.62 664586 7 16567 582636 2.76 599203 8 17187 575345 2.90 592532 9 16741 590151 2.76 606892 10 16643 574149 2.82 590792 11 15515 558213 2.70 573728 12 15057 543025 2.70 558082 13 14846 533359 2.71 548205 14 13947 518774 2.62 532721 15 13714 501634 2.66 515348 16 12981 488930 2.59 501911 17 12682 479905 2.57 492587 18 12884 470867 2.66 483751 19 12407 459987 2.63 472394 20 12547 452311 2.70 464858 21 12215 441970 2.69 454185 22 11689 431289 2.64 442978 23 11241 423618 2.58 434859 24 10929 418254 2.55 429183 25 10948 413243 2.58 424191 26 10560 404085 2.55 414645 27 10342 394583 2.55 404925 28 10332 389510 2.58 399842 29 9923 379404 2.55 389327 30 9777 370738 2.57 380515 31 9697 364243 2.59 373940 32 9579 354485 2.63 364064 33 9139 349625 2.55 358764 34 9070 344149 2.57 353219 35 8625 338539 2.48 347164 36 8462 333343 2.48 341805 37 8346 327830 2.48 336176 38 8127 322611 2.46 330738 39 7991 314561 2.48 322552 40 7874 309006 2.48 316880 41 7740 301274 2.50 309014 42 7626 294097 2.53 301723 43 7323 289428 2.47 296751 44 7058 287015 2.40 294073 45 7001 282103 2.42 289104 46 6765 279048 2.37 285813 47 6591 273243 2.36 279834 48 6731 268410 2.45 275141 49 6321 264979 2.33 271300 50 6315 257602 2.39 263917 51 6161 252658 2.38 258819 52 6065 247377 2.39 253442 53 5876 242665 2.36 248541 54 5731 237720 2.35 243451 55 5597 236015 2.32 241612 56 5534 234264 2.31 239798 57 5369 231085 2.27 236454 58 5424 227035 2.33 232459 59 5261 221797 2.32 227058 60 5136 216448 2.32 221584 61 4918 213004 2.26 217922 62 4842 207938 2.28 212780 63 4632 203628 2.22 208260 64 4631 202818 2.23 207449 65 4556 201029 2.22 205585 66 4472 198090 2.21 202562 67 4464 197549 2.21 202013 68 4263 192954 2.16 197217 69 4325 189626 2.23 193951 70 4206 184966 2.22 189172 71 4098 181000 2.21 185098 72 4003 176394 2.22 180397 73 3982 175051 2.22 179033 74 3871 172348 2.20 176219 75 3779 169126 2.19 172905 76 3773 168337 2.19 172110 77 3655 167301 2.14 170956 78 3605 163915 2.15 167520 79 3561 161564 2.16 165125 80 3417 158652 2.11 162069 81 3431 155459 2.16 158890 82 3393 152794 2.17 156187 83 3279 149401 2.15 152680 84 3135 146665 2.09 149800 85 3091 144898 2.09 147989 86 2976 142263 2.05 145239 87 2983 141217 2.07 144200 88 3040 139612 2.13 142652 89 2902 136810 2.08 139712 90 2888 134176 2.11 137064 91 2823 132939 2.08 135762 92 2798 129517 2.11 132315 93 2696 126655 2.08 129351 94 2630 125317 2.06 127947 95 2563 122500 2.05 125063 96 2472 120924 2.00 123396 97 2547 120556 2.07 123103 98 2476 117875 2.06 120351 99 2381 116232 2.01 118613 100 2298 114161 1.97 116459 101 2323 112083 2.03 114406 102 2146 110098 1.91 112244 103 2249 107780 2.04 110029 104 2161 106103 2.00 108264 105 2013 104268 1.89 106281 106 2035 102903 1.94 104938 107 2020 100703 1.97 102723 108 2041 100037 2.00 102078 109 1929 97952 1.93 99881 110 1937 96294 1.97 98231 111 1849 95382 1.90 97231 112 1869 93670 1.96 95539 113 1861 91727 1.99 93588 114 1729 89683 1.89 91412 115 1795 88693 1.98 90488 116 1695 87407 1.90 89102 117 1617 85364 1.86 86981 118 1609 84935 1.86 86544 119 1586 82710 1.88 84296 120 1565 81009 1.90 82574 121 1521 80329 1.86 81850 122 1468 78111 1.84 79579 123 1538 77171 1.95 78709 124 1452 76002 1.87 77454 125 1432 75203 1.87 76635 126 1385 72858 1.87 74243 127 1317 72017 1.80 73334 128 1328 70243 1.86 71571 129 1339 68941 1.91 70280 130 1290 67796 1.87 69086 131 1197 66420 1.77 67617 132 1223 65264 1.84 66487 133 1201 64149 1.84 65350 134 1177 62468 1.85 63645 135 1190 61850 1.89 63040 136 1143 60812 1.84 61955 137 1144 60210 1.86 61354 138 1090 58997 1.81 60087 139 1049 58296 1.77 59345 140 1061 56787 1.83 57848 141 1055 55182 1.88 56237 142 1047 54675 1.88 55722 143 1032 53944 1.88 54976 144 928 52253 1.74 53181 145 1027 51989 1.94 53016 146 972 50505 1.89 51477 147 930 49119 1.86 50049 148 921 48793 1.85 49714 149 988 47047 2.06 48035 150 853 42684 1.96 43537 151 321 0 100.00 321 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 60471 2644670 2.24 2705141 2 70633 2404888 2.85 2475521 3 73693 2275348 3.14 2349041 4 74858 2246710 3.22 2321568 5 69856 2537635 2.68 2607491 6 72486 2653563 2.66 2726049 7 72966 2536419 2.80 2609385 8 69732 2399249 2.82 2468981 9 68138 2410109 2.75 2478247 10 65723 2280410 2.80 2346133 11 63686 2223395 2.78 2287081 12 60485 2102658 2.80 2163143 13 57032 1998140 2.78 2055172 14 55438 1986232 2.72 2041670 15 54002 1941750 2.71 1995752 16 52526 1901435 2.69 1953961 17 53352 1907923 2.72 1961275 18 53209 1886415 2.74 1939624 19 52998 1864472 2.76 1917470 20 52153 1828101 2.77 1880254 21 51418 1780618 2.81 1832036 22 49198 1713355 2.79 1762553 23 47073 1659037 2.76 1706110 24 45850 1618431 2.75 1664281 25 43701 1576348 2.70 1620049 26 43622 1559198 2.72 1602820 27 43791 1556751 2.74 1600542 28 43262 1538669 2.73 1581931 29 43143 1521602 2.76 1564745 30 42275 1487080 2.76 1529355 31 41511 1444458 2.79 1485969 32 40363 1406351 2.79 1446714 33 38378 1355013 2.75 1393391 34 36708 1317006 2.71 1353714 35 35560 1299111 2.66 1334671 36 34909 1281196 2.65 1316105 37 34716 1268753 2.66 1303469 38 34385 1259960 2.66 1294345 39 34384 1240541 2.70 1274925 40 33739 1218813 2.69 1252552 41 32828 1192120 2.68 1224948 42 31935 1161692 2.68 1193627 43 30724 1124293 2.66 1155017 44 29464 1099252 2.61 1128716 45 28672 1075108 2.60 1103780 46 27624 1053766 2.55 1081390 47 27531 1048198 2.56 1075729 48 27128 1035785 2.55 1062913 49 26968 1021939 2.57 1048907 50 26701 1013774 2.57 1040475 51 26139 991765 2.57 1017904 52 25680 966628 2.59 992308 53 24867 944896 2.56 969763 54 23925 921254 2.53 945179 55 23203 902848 2.51 926051 56 22575 888964 2.48 911539 57 22210 877193 2.47 899403 58 21632 865788 2.44 887420 59 21508 855735 2.45 877243 60 21235 843339 2.46 864574 61 21035 832931 2.46 853966 62 20611 811435 2.48 832046 63 19804 792322 2.44 812126 64 19186 772281 2.42 791467 65 18719 762075 2.40 780794 66 18177 748263 2.37 766440 67 17914 741044 2.36 758958 68 17820 734616 2.37 752436 69 17404 719634 2.36 737038 70 17290 709248 2.38 726538 71 17004 701134 2.37 718138 72 16681 690091 2.36 706772 73 16170 672108 2.35 688278 74 15628 657462 2.32 673090 75 15072 641504 2.30 656576 76 14731 630912 2.28 645643 77 14304 627291 2.23 641595 78 14490 620700 2.28 635190 79 14088 614473 2.24 628561 80 13937 607482 2.24 621419 81 13824 600139 2.25 613963 82 13898 590235 2.30 604133 83 13527 578345 2.29 591872 84 13168 562520 2.29 575688 85 12721 549494 2.26 562215 86 12266 539815 2.22 552081 87 11790 530877 2.17 542667 88 11936 525874 2.22 537810 89 11739 523190 2.19 534929 90 11683 517811 2.21 529494 91 11643 509275 2.24 520918 92 11387 499640 2.23 511027 93 11100 490224 2.21 501324 94 10737 478478 2.19 489215 95 10410 466464 2.18 476874 96 10385 457498 2.22 467883 97 9893 451888 2.14 461781 98 9722 446586 2.13 456308 99 9469 443054 2.09 452523 100 9552 436481 2.14 446033 101 9396 432503 2.13 441899 102 9399 423974 2.17 433373 103 9112 415648 2.15 424760 104 8745 406869 2.10 415614 105 8871 399617 2.17 408488 106 8426 389548 2.12 397974 107 8177 382353 2.09 390530 108 7950 377074 2.06 385024 109 8047 374122 2.11 382169 110 7842 370353 2.07 378195 111 7654 367394 2.04 375048 112 7578 360467 2.06 368045 113 7522 353787 2.08 361309 114 7360 345710 2.08 353070 115 7216 337501 2.09 344717 116 6851 331062 2.03 337913 117 6678 327131 2.00 333809 118 6546 320701 2.00 327247 119 6485 317320 2.00 323805 120 6541 313204 2.05 319745 121 6344 309031 2.01 315375 122 6328 305610 2.03 311938 123 6263 298384 2.06 304647 124 5982 292246 2.01 298228 125 5869 287023 2.00 292892 126 5958 280637 2.08 286595 127 5759 275118 2.05 280877 128 5607 271194 2.03 276801 129 5493 267630 2.01 273123 130 5416 264163 2.01 269579 131 5262 259488 1.99 264750 132 5151 255409 1.98 260560 133 5233 249274 2.06 254507 134 5075 245538 2.03 250613 135 4918 240590 2.00 245508 136 4770 235649 1.98 240419 137 4677 231546 1.98 236223 138 4520 228017 1.94 232537 139 4442 224706 1.94 229148 140 4374 219934 1.95 224308 141 4324 217091 1.95 221415 142 4210 213191 1.94 217401 143 4018 210036 1.88 214054 144 3998 204646 1.92 208644 145 3948 200082 1.94 204030 146 4002 196440 2.00 200442 147 3826 192308 1.95 196134 148 3962 189346 2.05 193308 149 3576 184253 1.90 187829 150 3392 166638 1.99 170030 151 1190 0 100.00 1190