CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 140889 502070 21.91 642959 2 177885 730544 19.58 908429 3 189793 844962 18.34 1034755 4 216120 786289 21.56 1002409 5 196609 780018 20.13 976627 6 202254 801164 20.16 1003418 7 210240 793932 20.94 1004172 8 218513 858262 20.29 1076775 9 211226 842737 20.04 1053963 10 209368 855893 19.65 1065261 11 213325 857387 19.92 1070712 12 202383 806521 20.06 1008904 13 205634 808920 20.27 1014554 14 203383 792692 20.42 996075 15 202447 787219 20.46 989666 16 208324 805978 20.54 1014302 17 211280 824815 20.39 1036095 18 213185 842293 20.20 1055478 19 217606 856857 20.25 1074463 20 220004 865542 20.27 1085546 21 217501 854651 20.29 1072152 22 216522 846206 20.37 1062728 23 219329 850503 20.50 1069832 24 213592 822992 20.61 1036584 25 211602 809467 20.72 1021069 26 216444 834355 20.60 1050799 27 218473 856680 20.32 1075153 28 220177 863594 20.32 1083771 29 224340 880831 20.30 1105171 30 222689 881420 20.17 1104109 31 223501 883796 20.18 1107297 32 222201 878005 20.20 1100206 33 222206 868189 20.38 1090395 34 222286 857494 20.59 1079780 35 222758 858776 20.60 1081534 36 223132 863973 20.53 1087105 37 224257 874336 20.41 1098593 38 226580 892481 20.25 1119061 39 226862 895091 20.22 1121953 40 227727 897733 20.23 1125460 41 230049 912406 20.14 1142455 42 227638 905818 20.08 1133456 43 229541 903133 20.27 1132674 44 230361 901219 20.36 1131580 45 225744 884006 20.34 1109750 46 228335 886669 20.48 1115004 47 230246 909499 20.20 1139745 48 228438 910654 20.05 1139092 49 231675 918888 20.14 1150563 50 233360 926770 20.11 1160130 51 230930 918538 20.09 1149468 52 230558 914405 20.14 1144963 53 233000 925297 20.12 1158297 54 230979 918220 20.10 1149199 55 231318 911437 20.24 1142755 56 230336 911261 20.18 1141597 57 229740 914287 20.08 1144027 58 231993 921309 20.12 1153302 59 230445 926820 19.91 1157265 60 230254 929380 19.86 1159634 61 231753 930271 19.94 1162024 62 231451 932085 19.89 1163536 63 230837 928836 19.91 1159673 64 232121 930023 19.97 1162144 65 229347 918640 19.98 1147987 66 228076 911059 20.02 1139135 67 232184 920206 20.15 1152390 68 230004 927423 19.87 1157427 69 224928 922850 19.60 1147778 70 226963 924286 19.71 1151249 71 230261 933262 19.79 1163523 72 227176 931555 19.61 1158731 73 226132 925688 19.63 1151820 74 225078 915081 19.74 1140159 75 222595 905219 19.74 1127814 76 223686 905610 19.81 1129296 77 222692 912098 19.62 1134790 78 222935 918413 19.53 1141348 79 222736 923333 19.43 1146069 80 222353 929954 19.30 1152307 81 220320 918438 19.35 1138758 82 220685 917452 19.39 1138137 83 219287 916133 19.31 1135420 84 216708 909490 19.24 1126198 85 216538 898528 19.42 1115066 86 213895 893768 19.31 1107663 87 211690 885518 19.29 1097208 88 211978 892740 19.19 1104718 89 212944 903344 19.08 1116288 90 210817 902487 18.94 1113304 91 211450 905236 18.94 1116686 92 210822 907565 18.85 1118387 93 208057 894145 18.88 1102202 94 207342 888642 18.92 1095984 95 205456 877134 18.98 1082590 96 201997 864472 18.94 1066469 97 201909 858737 19.04 1060646 98 201014 864635 18.86 1065649 99 198866 866084 18.67 1064950 100 197677 872557 18.47 1070234 101 197703 872324 18.48 1070027 102 194956 863201 18.42 1058157 103 194503 858866 18.46 1053369 104 193796 857156 18.44 1050952 105 192151 844535 18.54 1036686 106 189092 832930 18.50 1022022 107 186478 824673 18.44 1011151 108 183928 817222 18.37 1001150 109 183816 818333 18.34 1002149 110 182973 827139 18.11 1010112 111 182272 827125 18.06 1009397 112 181526 824395 18.05 1005921 113 180405 822171 17.99 1002576 114 178118 809839 18.03 987957 115 176657 801737 18.06 978394 116 173526 792282 17.97 965808 117 170793 783047 17.91 953840 118 169554 775332 17.94 944886 119 168444 778280 17.79 946724 120 168012 776109 17.80 944121 121 166222 776496 17.63 942718 122 165832 774936 17.63 940768 123 162886 766640 17.52 929526 124 162106 757438 17.63 919544 125 160144 749822 17.60 909966 126 155171 735953 17.41 891124 127 153278 730054 17.35 883332 128 151728 723262 17.34 874990 129 148822 713293 17.26 862115 130 147759 713690 17.15 861449 131 146032 708836 17.08 854868 132 145003 702397 17.11 847400 133 141885 694910 16.96 836795 134 140897 689605 16.97 830502 135 138852 681015 16.94 819867 136 137193 673447 16.92 810640 137 134493 668790 16.74 803283 138 131921 659601 16.67 791522 139 130930 652001 16.72 782931 140 128451 645889 16.59 774340 141 125590 638113 16.44 763703 142 124433 628622 16.52 753055 143 121858 623552 16.35 745410 144 119018 610593 16.31 729611 145 117609 604617 16.28 722226 146 114668 599360 16.06 714028 147 114365 592272 16.18 706637 148 112381 582371 16.18 694752 149 109768 578499 15.95 688267 150 105338 567336 15.66 672674 151 98508 527566 15.73 626074 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 18638 1072469 1.71 1091107 2 104815 1270475 7.62 1375290 3 108638 1448190 6.98 1556828 4 100363 1256470 7.40 1356833 5 94233 1147886 7.59 1242119 6 95787 1181049 7.50 1276836 7 106685 1231985 7.97 1338670 8 106719 1238780 7.93 1345499 9 104310 1238260 7.77 1342570 10 104360 1229003 7.83 1333363 11 107766 1234033 8.03 1341799 12 105721 1230988 7.91 1336709 13 106269 1219147 8.02 1325416 14 106135 1233001 7.93 1339136 15 107591 1236510 8.00 1344101 16 107799 1221777 8.11 1329576 17 110065 1222317 8.26 1332382 18 113168 1228091 8.44 1341259 19 114976 1231490 8.54 1346466 20 114028 1230372 8.48 1344400 21 114825 1235769 8.50 1350594 22 118708 1264999 8.58 1383707 23 115878 1275593 8.33 1391471 24 114163 1286420 8.15 1400583 25 116017 1283516 8.29 1399533 26 116409 1293491 8.26 1409900 27 117565 1281368 8.40 1398933 28 117158 1268028 8.46 1385186 29 119243 1278510 8.53 1397753 30 120004 1279961 8.57 1399965 31 120537 1291939 8.53 1412476 32 120215 1308889 8.41 1429104 33 118518 1320023 8.24 1438541 34 119027 1330873 8.21 1449900 35 119070 1348806 8.11 1467876 36 118395 1337896 8.13 1456291 37 119498 1319523 8.30 1439021 38 119726 1319386 8.32 1439112 39 120891 1322488 8.38 1443379 40 122582 1324679 8.47 1447261 41 121767 1338232 8.34 1459999 42 121151 1349727 8.24 1470878 43 122581 1363718 8.25 1486299 44 121452 1392808 8.02 1514260 45 119293 1383797 7.94 1503090 46 118946 1384008 7.91 1502954 47 119931 1375417 8.02 1495348 48 119308 1361596 8.06 1480904 49 120372 1343936 8.22 1464308 50 120600 1345002 8.23 1465602 51 120800 1349716 8.21 1470516 52 122542 1361188 8.26 1483730 53 120364 1382811 8.01 1503175 54 120820 1400573 7.94 1521393 55 120700 1400434 7.93 1521134 56 119437 1403812 7.84 1523249 57 119298 1386452 7.92 1505750 58 117966 1368343 7.94 1486309 59 119292 1362602 8.05 1481894 60 119065 1355928 8.07 1474993 61 119352 1360545 8.06 1479897 62 119124 1382214 7.93 1501338 63 119653 1398670 7.88 1518323 64 118416 1403268 7.78 1521684 65 117991 1418500 7.68 1536491 66 118908 1414026 7.76 1532934 67 117482 1401180 7.74 1518662 68 117141 1393723 7.75 1510864 69 115356 1361812 7.81 1477168 70 116034 1354583 7.89 1470617 71 117672 1377753 7.87 1495425 72 116145 1380987 7.76 1497132 73 115639 1374402 7.76 1490041 74 116468 1396390 7.70 1512858 75 115363 1409461 7.57 1524824 76 114309 1405492 7.52 1519801 77 114267 1402582 7.53 1516849 78 114107 1387580 7.60 1501687 79 114160 1374369 7.67 1488529 80 115162 1372368 7.74 1487530 81 114448 1358335 7.77 1472783 82 113664 1354687 7.74 1468351 83 113028 1366204 7.64 1479232 84 111434 1367561 7.53 1478995 85 111514 1377358 7.49 1488872 86 109709 1377148 7.38 1486857 87 108715 1366898 7.37 1475613 88 108868 1353678 7.44 1462546 89 109283 1349654 7.49 1458937 90 109519 1333016 7.59 1442535 91 109679 1337090 7.58 1446769 92 109301 1335686 7.56 1444987 93 107559 1332813 7.47 1440372 94 107024 1332362 7.44 1439386 95 106065 1341411 7.33 1447476 96 104539 1326459 7.31 1430998 97 103878 1318602 7.30 1422480 98 103622 1313681 7.31 1417303 99 103908 1306363 7.37 1410271 100 103443 1292560 7.41 1396003 101 103366 1284752 7.45 1388118 102 103152 1280629 7.45 1383781 103 102740 1278222 7.44 1380962 104 101844 1283615 7.35 1385459 105 100598 1275499 7.31 1376097 106 98505 1273197 7.18 1371702 107 97715 1262897 7.18 1360612 108 97283 1245455 7.25 1342738 109 97034 1238969 7.26 1336003 110 97760 1240386 7.31 1338146 111 97528 1226279 7.37 1323807 112 97021 1225858 7.33 1322879 113 95763 1226920 7.24 1322683 114 94279 1214363 7.20 1308642 115 94501 1207486 7.26 1301987 116 94120 1205907 7.24 1300027 117 91801 1189462 7.16 1281263 118 91751 1178129 7.23 1269880 119 91445 1171366 7.24 1262811 120 90691 1157065 7.27 1247756 121 90905 1152910 7.31 1243815 122 89795 1147782 7.26 1237577 123 88577 1136015 7.23 1224592 124 87641 1126042 7.22 1213683 125 86836 1118530 7.20 1205366 126 84951 1100898 7.16 1185849 127 84420 1090113 7.19 1174533 128 83683 1077804 7.20 1161487 129 82564 1062176 7.21 1144740 130 82218 1055155 7.23 1137373 131 81231 1048248 7.19 1129479 132 80435 1039937 7.18 1120372 133 80132 1030554 7.21 1110686 134 79002 1024534 7.16 1103536 135 78352 1006407 7.22 1084759 136 76950 996385 7.17 1073335 137 76274 986362 7.18 1062636 138 75409 972280 7.20 1047689 139 75054 957113 7.27 1032167 140 73925 946585 7.24 1020510 141 73048 935763 7.24 1008811 142 72043 923123 7.24 995166 143 70870 913121 7.20 983991 144 69864 897812 7.22 967676 145 68970 889799 7.19 958769 146 68851 877708 7.27 946559 147 69002 865834 7.38 934836 148 68404 853839 7.42 922243 149 66860 839717 7.37 906577 150 64011 820395 7.24 884406 151 57334 778318 6.86 835652 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 93403 4803930 1.91 4897333 2 449440 5089686 8.11 5539126 3 501080 4909188 9.26 5410268 4 375333 4036467 8.51 4411800 5 337649 3863109 8.04 4200758 6 362827 4153652 8.03 4516479 7 392644 4292838 8.38 4685482 8 414341 4508631 8.42 4922972 9 410875 4561473 8.26 4972348 10 415054 4601486 8.27 5016540 11 442846 4708586 8.60 5151432 12 418855 4574743 8.39 4993598 13 420474 4521207 8.51 4941681 14 416694 4461850 8.54 4878544 15 411014 4363335 8.61 4774349 16 413439 4348323 8.68 4761762 17 421577 4359811 8.82 4781388 18 433446 4406478 8.96 4839924 19 445968 4483873 9.05 4929841 20 457446 4604837 9.04 5062283 21 461413 4653521 9.02 5114934 22 462718 4644715 9.06 5107433 23 451420 4663992 8.82 5115412 24 439962 4610248 8.71 5050210 25 430981 4505525 8.73 4936506 26 429139 4452424 8.79 4881563 27 434709 4465826 8.87 4900535 28 448103 4488998 9.08 4937101 29 459729 4609117 9.07 5068846 30 467982 4684322 9.08 5152304 31 474921 4748786 9.09 5223707 32 469698 4773107 8.96 5242805 33 461919 4737205 8.88 5199124 34 451281 4700409 8.76 5151690 35 442140 4660019 8.67 5102159 36 434879 4588332 8.66 5023211 37 443429 4576147 8.83 5019576 38 454654 4634168 8.93 5088822 39 460917 4685409 8.96 5146326 40 468089 4755761 8.96 5223850 41 468776 4824378 8.86 5293154 42 465792 4819214 8.81 5285006 43 464690 4812717 8.81 5277407 44 454503 4810677 8.63 5265180 45 441722 4738479 8.53 5180201 46 437749 4662091 8.58 5099840 47 438433 4652110 8.61 5090543 48 440170 4622590 8.69 5062760 49 451625 4669090 8.82 5120715 50 458777 4766008 8.78 5224785 51 457106 4772340 8.74 5229446 52 458513 4793265 8.73 5251778 53 455149 4830255 8.61 5285404 54 445778 4815932 8.47 5261710 55 445082 4786490 8.51 5231572 56 440047 4773976 8.44 5214023 57 436310 4720285 8.46 5156595 58 441101 4711503 8.56 5152604 59 445395 4729831 8.61 5175226 60 450208 4763640 8.63 5213848 61 456907 4843604 8.62 5300511 62 454079 4888371 8.50 5342450 63 449183 4861337 8.46 5310520 64 441084 4838272 8.35 5279356 65 434785 4836046 8.25 5270831 66 431417 4769157 8.30 5200574 67 433978 4761795 8.35 5195773 68 434492 4784658 8.32 5219150 69 435448 4745186 8.41 5180634 70 440435 4770194 8.45 5210629 71 444879 4858526 8.39 5303405 72 441510 4862896 8.32 5304406 73 439634 4851596 8.31 5291230 74 434976 4846002 8.24 5280978 75 425851 4786023 8.17 5211874 76 418259 4749551 8.09 5167810 77 418181 4727625 8.13 5145806 78 417331 4705862 8.15 5123193 79 425187 4713368 8.27 5138555 80 430969 4759173 8.30 5190142 81 431814 4757401 8.32 5189215 82 432823 4794806 8.28 5227629 83 430712 4823633 8.20 5254345 84 423753 4773925 8.15 5197678 85 417156 4743839 8.08 5160995 86 408125 4709057 7.98 5117182 87 402199 4641145 7.97 5043344 88 402916 4618630 8.02 5021546 89 407518 4647804 8.06 5055322 90 411881 4666272 8.11 5078153 91 418013 4723145 8.13 5141158 92 415489 4747855 8.05 5163344 93 410610 4730802 7.99 5141412 94 408488 4728936 7.95 5137424 95 401227 4688714 7.88 5089941 96 391568 4617426 7.82 5008994 97 387852 4571284 7.82 4959136 98 387893 4561268 7.84 4949161 99 386843 4530157 7.87 4917000 100 391887 4547025 7.93 4938912 101 395851 4584538 7.95 4980389 102 395077 4588304 7.93 4983381 103 394886 4584667 7.93 4979553 104 390213 4579058 7.85 4969271 105 381997 4524468 7.79 4906465 106 376977 4477489 7.77 4854466 107 371810 4424803 7.75 4796613 108 365257 4349740 7.75 4714997 109 366358 4325077 7.81 4691435 110 369755 4344670 7.84 4714425 111 371967 4349970 7.88 4721937 112 373476 4365273 7.88 4738749 113 371516 4370785 7.83 4742301 114 364295 4331817 7.76 4696112 115 360653 4293452 7.75 4654105 116 354092 4251942 7.69 4606034 117 350382 4186344 7.72 4536726 118 349277 4150481 7.76 4499758 119 347304 4125805 7.76 4473109 120 345870 4098106 7.78 4443976 121 347878 4102936 7.82 4450814 122 346714 4109506 7.78 4456220 123 343337 4079856 7.76 4423193 124 339745 4047838 7.74 4387583 125 335399 4013857 7.71 4349256 126 328941 3953917 7.68 4282858 127 324622 3908263 7.67 4232885 128 321359 3873160 7.66 4194519 129 317910 3826792 7.67 4144702 130 317869 3805199 7.71 4123068 131 315127 3792003 7.67 4107130 132 312495 3762215 7.67 4074710 133 310736 3732061 7.69 4042797 134 306419 3704538 7.64 4010957 135 302442 3654410 7.64 3956852 136 300462 3617205 7.67 3917667 137 294591 3576303 7.61 3870894 138 291226 3522913 7.64 3814139 139 290202 3490506 7.68 3780708 140 286679 3457174 7.66 3743853 141 283359 3411616 7.67 3694975 142 280422 3375871 7.67 3656293 143 277126 3348972 7.64 3626098 144 271573 3295126 7.61 3566699 145 268699 3254827 7.63 3523526 146 265725 3229948 7.60 3495673 147 263947 3193459 7.63 3457406 148 262190 3157023 7.67 3419213 149 257728 3110848 7.65 3368576 150 251177 3042717 7.63 3293894 151 219875 2906300 7.03 3126175 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 34430 464678 6.90 499108 2 42258 433667 8.88 475925 3 63199 470650 11.84 533849 4 76431 519638 12.82 596069 5 74164 519339 12.50 593503 6 65839 495860 11.72 561699 7 68813 498013 12.14 566826 8 67318 483421 12.22 550739 9 72575 518051 12.29 590626 10 72745 487366 12.99 560111 11 72401 483980 13.01 556381 12 74201 475769 13.49 549970 13 68746 435423 13.64 504169 14 68032 432240 13.60 500272 15 66441 415780 13.78 482221 16 65291 402945 13.94 468236 17 66560 404966 14.12 471526 18 66344 403188 14.13 469532 19 65899 400662 14.12 466561 20 66444 399312 14.27 465756 21 66154 391942 14.44 458096 22 65113 378982 14.66 444095 23 63424 368295 14.69 431719 24 62912 362635 14.78 425547 25 60833 346702 14.93 407535 26 59593 336099 15.06 395692 27 59595 336579 15.04 396174 28 58858 336317 14.89 395175 29 58328 333362 14.89 391690 30 58141 330462 14.96 388603 31 57349 323811 15.05 381160 32 57063 319438 15.16 376501 33 55306 309905 15.14 365211 34 54107 299642 15.30 353749 35 53472 292308 15.46 345780 36 52637 286746 15.51 339383 37 52172 284557 15.49 336729 38 50672 282342 15.22 333014 39 51124 280722 15.41 331846 40 50512 276171 15.46 326683 41 49649 270394 15.51 320043 42 48988 269159 15.40 318147 43 47611 262222 15.37 309833 44 46992 257057 15.46 304049 45 46851 250585 15.75 297436 46 45226 242957 15.69 288183 47 44611 239318 15.71 283929 48 44620 239873 15.68 284493 49 43789 236205 15.64 279994 50 43692 234527 15.70 278219 51 43359 231938 15.75 275297 52 42257 226561 15.72 268818 53 42036 222389 15.90 264425 54 41178 220104 15.76 261282 55 40304 214418 15.82 254722 56 40104 210844 15.98 250948 57 39253 206054 16.00 245307 58 38538 203650 15.91 242188 59 38414 202894 15.92 241308 60 37761 200607 15.84 238368 61 37294 196502 15.95 233796 62 37296 195106 16.05 232402 63 36801 192022 16.08 228823 64 36003 189223 15.99 225226 65 35580 186220 16.04 221800 66 34694 181906 16.02 216600 67 34268 178749 16.09 213017 68 34211 176213 16.26 210424 69 33872 175287 16.19 209159 70 33423 172137 16.26 205560 71 32908 170732 16.16 203640 72 32907 169766 16.24 202673 73 32240 166802 16.20 199042 74 31836 163915 16.26 195751 75 31103 161005 16.19 192108 76 30571 156312 16.36 186883 77 30509 154971 16.45 185480 78 30236 153511 16.46 183747 79 29813 152904 16.32 182717 80 29162 151918 16.10 181080 81 29266 150185 16.31 179451 82 28602 147347 16.26 175949 83 28698 145998 16.43 174696 84 28248 142556 16.54 170804 85 27593 140479 16.42 168072 86 27352 137521 16.59 164873 87 26725 134550 16.57 161275 88 26157 132134 16.52 158291 89 26031 131926 16.48 157957 90 26199 131127 16.65 157326 91 25661 130869 16.39 156530 92 25595 129539 16.50 155134 93 24998 127972 16.34 152970 94 24846 124971 16.58 149817 95 24358 123467 16.48 147825 96 24062 119917 16.71 143979 97 23339 117250 16.60 140589 98 23114 115928 16.62 139042 99 23100 115476 16.67 138576 100 22604 114720 16.46 137324 101 22337 113732 16.42 136069 102 22402 112768 16.57 135170 103 21762 110080 16.51 131842 104 21734 108471 16.69 130205 105 21020 107250 16.39 128270 106 20996 104398 16.74 125394 107 20429 102759 16.58 123188 108 20308 100459 16.82 120767 109 19531 98792 16.51 118323 110 19712 98129 16.73 117841 111 19416 97606 16.59 117022 112 19261 96552 16.63 115813 113 19022 95759 16.57 114781 114 18716 94050 16.60 112766 115 18616 92033 16.82 110649 116 18337 90962 16.78 109299 117 17820 89427 16.62 107247 118 17520 88417 16.54 105937 119 17095 85825 16.61 102920 120 17131 85606 16.67 102737 121 17087 83845 16.93 100932 122 16835 83899 16.71 100734 123 16659 82481 16.80 99140 124 16075 81405 16.49 97480 125 16089 79777 16.78 95866 126 15812 78337 16.79 94149 127 15092 76762 16.43 91854 128 15116 75073 16.76 90189 129 14851 74210 16.68 89061 130 14582 73112 16.63 87694 131 14426 72080 16.68 86506 132 14261 71158 16.70 85419 133 14098 69787 16.81 83885 134 13721 69063 16.57 82784 135 13404 68003 16.47 81407 136 13490 66731 16.82 80221 137 13399 66315 16.81 79714 138 13014 64382 16.81 77396 139 12658 63750 16.57 76408 140 12535 62683 16.66 75218 141 12461 61542 16.84 74003 142 12129 60659 16.66 72788 143 11988 59774 16.71 71762 144 11710 58801 16.61 70511 145 11296 57448 16.43 68744 146 11231 56859 16.49 68090 147 10858 55696 16.31 66554 148 10948 54626 16.70 65574 149 10688 53784 16.58 64472 150 10167 46891 17.82 57058 151 8875 0 100.00 8875 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 66107 823549 7.43 889656 2 56511 601391 8.59 657902 3 57564 646185 8.18 703749 4 81447 676687 10.74 758134 5 67136 843027 7.38 910163 6 58519 758243 7.16 816762 7 54718 660976 7.65 715694 8 57035 655029 8.01 712064 9 56234 676844 7.67 733078 10 55409 665672 7.68 721081 11 52999 644967 7.59 697966 12 52647 629238 7.72 681885 13 51237 623996 7.59 675233 14 48834 607071 7.45 655905 15 47699 591227 7.47 638926 16 46140 581352 7.35 627492 17 46073 573827 7.43 619900 18 46794 562079 7.69 608873 19 45515 551030 7.63 596545 20 45356 542728 7.71 588084 21 44900 533746 7.76 578646 22 44100 522276 7.79 566376 23 42598 513411 7.66 556009 24 42234 509949 7.65 552183 25 41882 505529 7.65 547411 26 40718 498237 7.55 538955 27 40225 487696 7.62 527921 28 40009 482594 7.66 522603 29 39553 471832 7.73 511385 30 38890 458722 7.82 497612 31 38651 453952 7.85 492603 32 37880 446193 7.83 484073 33 36929 440711 7.73 477640 34 36188 432813 7.72 469001 35 34761 429480 7.49 464241 36 34444 423819 7.52 458263 37 34435 419190 7.59 453625 38 34105 412830 7.63 446935 39 33470 403621 7.66 437091 40 33237 394489 7.77 427726 41 32590 387184 7.76 419774 42 31946 379077 7.77 411023 43 31273 376466 7.67 407739 44 30483 371893 7.58 402376 45 29481 367400 7.43 396881 46 29654 368521 7.45 398175 47 28345 360246 7.29 388591 48 28587 354804 7.46 383391 49 27733 349201 7.36 376934 50 27304 339945 7.43 367249 51 26984 333738 7.48 360722 52 26521 327750 7.49 354271 53 25920 322171 7.45 348091 54 24913 317713 7.27 342626 55 24542 318064 7.16 342606 56 25023 316643 7.32 341666 57 24159 311090 7.21 335249 58 23755 308436 7.15 332191 59 23564 299696 7.29 323260 60 22982 294288 7.24 317270 61 22630 287841 7.29 310471 62 22254 283229 7.28 305483 63 21789 279063 7.24 300852 64 21232 279079 7.07 300311 65 20856 276278 7.02 297134 66 20597 275087 6.97 295684 67 20419 274249 6.93 294668 68 20032 269201 6.93 289233 69 19922 264227 7.01 284149 70 19439 259768 6.96 279207 71 19005 252416 7.00 271421 72 18639 247222 7.01 265861 73 18700 246667 7.05 265367 74 17987 243117 6.89 261104 75 18184 240195 7.04 258379 76 17553 240531 6.80 258084 77 17276 239028 6.74 256304 78 17247 235286 6.83 252533 79 16913 231431 6.81 248344 80 16740 228709 6.82 245449 81 16470 223953 6.85 240423 82 16305 220934 6.87 237239 83 15734 217108 6.76 232842 84 15873 211960 6.97 227833 85 15465 210435 6.85 225900 86 15095 208193 6.76 223288 87 14612 208482 6.55 223094 88 14945 205512 6.78 220457 89 14437 203093 6.64 217530 90 14356 199333 6.72 213689 91 14514 196679 6.87 211193 92 13843 192855 6.70 206698 93 13779 190290 6.75 204069 94 13381 187056 6.68 200437 95 13132 185189 6.62 198321 96 12918 183747 6.57 196665 97 12775 182425 6.54 195200 98 12424 178697 6.50 191121 99 12102 176737 6.41 188839 100 12294 174044 6.60 186338 101 11988 171209 6.54 183197 102 11804 168743 6.54 180547 103 11494 166684 6.45 178178 104 11010 162390 6.35 173400 105 11156 160668 6.49 171824 106 10766 159787 6.31 170553 107 10785 157087 6.42 167872 108 10658 155899 6.40 166557 109 10367 153391 6.33 163758 110 10184 150071 6.35 160255 111 10222 149381 6.40 159603 112 9958 147203 6.34 157161 113 9856 144141 6.40 153997 114 9524 142996 6.24 152520 115 9443 141107 6.27 150550 116 9241 138307 6.26 147548 117 9133 136341 6.28 145474 118 9005 136369 6.19 145374 119 8695 133148 6.13 141843 120 8645 130305 6.22 138950 121 8617 129512 6.24 138129 122 8321 126291 6.18 134612 123 8285 124656 6.23 132941 124 8193 123763 6.21 131956 125 7891 120156 6.16 128047 126 7853 119422 6.17 127275 127 7632 116841 6.13 124473 128 7450 114100 6.13 121550 129 7516 113065 6.23 120581 130 7364 111659 6.19 119023 131 7219 109327 6.19 116546 132 7127 107909 6.20 115036 133 7000 105974 6.20 112974 134 6616 105048 5.92 111664 135 6676 102695 6.10 109371 136 6517 101899 6.01 108416 137 6496 100714 6.06 107210 138 6416 99155 6.08 105571 139 6254 96958 6.06 103212 140 6132 94955 6.07 101087 141 5984 92883 6.05 98867 142 5943 91472 6.10 97415 143 5719 90272 5.96 95991 144 5437 88877 5.76 94314 145 5698 87419 6.12 93117 146 5523 85446 6.07 90969 147 5396 84494 6.00 89890 148 5243 82708 5.96 87951 149 5192 80114 6.09 85306 150 4727 72078 6.15 76805 151 1528 0 100.00 1528 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 218744 2928391 6.95 3147135 2 244662 2621147 8.54 2865809 3 227104 2445961 8.50 2673065 4 229073 2470966 8.48 2700039 5 231360 2855812 7.49 3087172 6 243940 2987839 7.55 3231779 7 245426 2864075 7.89 3109501 8 235392 2710575 7.99 2945967 9 231195 2731144 7.80 2962339 10 223416 2584071 7.96 2807487 11 218844 2526060 7.97 2744904 12 209341 2386764 8.06 2596105 13 199368 2269040 8.08 2468408 14 194750 2266887 7.91 2461637 15 190884 2219619 7.92 2410503 16 185775 2191027 7.82 2376802 17 190264 2209601 7.93 2399865 18 191450 2192101 8.03 2383551 19 191837 2171402 8.12 2363239 20 191172 2137210 8.21 2328382 21 188692 2091079 8.28 2279771 22 182159 2008406 8.32 2190565 23 174306 1950748 8.20 2125054 24 170111 1916618 8.15 2086729 25 166281 1870229 8.16 2036510 26 164847 1861805 8.13 2026652 27 166149 1869424 8.16 2035573 28 166405 1853155 8.24 2019560 29 167775 1839469 8.36 2007244 30 165209 1798384 8.41 1963593 31 162424 1754149 8.47 1916573 32 158587 1707336 8.50 1865923 33 152229 1649638 8.45 1801867 34 145700 1606212 8.32 1751912 35 141828 1588191 8.20 1730019 36 140552 1574750 8.19 1715302 37 140908 1568501 8.24 1709409 38 140432 1568606 8.22 1709038 39 140275 1549626 8.30 1689901 40 138711 1524365 8.34 1663076 41 136228 1493736 8.36 1629964 42 133955 1453934 8.44 1587889 43 128473 1412656 8.34 1541129 44 123665 1383285 8.21 1506950 45 119888 1357885 8.11 1477773 46 116908 1338762 8.03 1455670 47 116980 1337369 8.04 1454349 48 116984 1326851 8.10 1443835 49 114876 1318001 8.02 1432877 50 114204 1308969 8.02 1423173 51 113165 1283228 8.10 1396393 52 110228 1248545 8.11 1358773 53 107547 1226691 8.06 1334238 54 104191 1196074 8.01 1300265 55 101013 1174684 7.92 1275697 56 99111 1164719 7.84 1263830 57 97676 1154916 7.80 1252592 58 96655 1142335 7.80 1238990 59 95795 1132509 7.80 1228304 60 95489 1119141 7.86 1214630 61 95042 1108278 7.90 1203320 62 92390 1082080 7.87 1174470 63 89466 1055519 7.81 1144985 64 87108 1032622 7.78 1119730 65 85314 1020360 7.72 1105674 66 83235 1005187 7.65 1088422 67 82040 1002569 7.56 1084609 68 81255 997188 7.53 1078443 69 80859 983476 7.60 1064335 70 79863 967702 7.62 1047565 71 79417 961246 7.63 1040663 72 77426 944523 7.58 1021949 73 75823 923188 7.59 999011 74 74371 905803 7.59 980174 75 71938 883947 7.53 955885 76 70491 874831 7.46 945322 77 69181 873824 7.34 943005 78 68578 869388 7.31 937966 79 68301 864118 7.33 932419 80 67983 853694 7.38 921677 81 67734 845940 7.41 913674 82 67644 835264 7.49 902908 83 66193 820935 7.46 887128 84 64112 798866 7.43 862978 85 61623 781250 7.31 842873 86 60090 770035 7.24 830125 87 59022 762167 7.19 821189 88 58048 757048 7.12 815096 89 57995 756591 7.12 814586 90 58822 751753 7.26 810575 91 57848 742096 7.23 799944 92 57091 729443 7.26 786534 93 55458 714491 7.20 769949 94 55024 700298 7.28 755322 95 52596 683271 7.15 735867 96 51480 671751 7.12 723231 97 50636 665859 7.07 716495 98 49430 664848 6.92 714278 99 49520 658390 7.00 707910 100 49768 652703 7.08 702471 101 49084 646034 7.06 695118 102 48247 635749 7.05 683996 103 47021 622671 7.02 669692 104 46461 610329 7.07 656790 105 45256 602866 6.98 648122 106 44065 589399 6.96 633464 107 43196 581508 6.91 624704 108 42238 574831 6.84 617069 109 41977 571775 6.84 613752 110 42268 569846 6.91 612114 111 41916 563322 6.93 605238 112 41067 554766 6.89 595833 113 40144 544088 6.87 584232 114 39625 534974 6.90 574599 115 38673 522742 6.89 561415 116 37660 515809 6.80 553469 117 36945 506923 6.79 543868 118 36088 501353 6.71 537441 119 35817 497150 6.72 532967 120 35665 493611 6.74 529276 121 35019 486701 6.71 521720 122 34788 479527 6.76 514315 123 34131 471050 6.76 505181 124 33214 462891 6.69 496105 125 32885 453811 6.76 486696 126 32061 446582 6.70 478643 127 31386 438027 6.69 469413 128 30626 433473 6.60 464099 129 30385 428860 6.62 459245 130 30013 424996 6.60 455009 131 29676 418454 6.62 448130 132 29210 411039 6.63 440249 133 28488 404250 6.58 432738 134 28349 397814 6.65 426163 135 27645 390846 6.61 418491 136 26961 383274 6.57 410235 137 26574 378763 6.56 405337 138 25785 372681 6.47 398466 139 25902 369427 6.55 395329 140 25187 362498 6.50 387685 141 24882 357823 6.50 382705 142 24325 351424 6.47 375749 143 24408 344641 6.61 369049 144 23680 338580 6.54 362260 145 22882 330965 6.47 353847 146 22214 325144 6.40 347358 147 22176 319604 6.49 341780 148 21668 314397 6.45 336065 149 20800 306691 6.35 327491 150 19425 277303 6.55 296728 151 5823 0 100.00 5823