ERR10684004.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 55476125 lines in total Total number of methylation call strings processed: 110952250 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1679104958 Total methylated C's in CpG context: 32932016 Total methylated C's in CHG context: 9578125 Total methylated C's in CHH context: 38268129 Total C to T conversions in CpG context: 189830880 Total C to T conversions in CHG context: 291060443 Total C to T conversions in CHH context: 1117435365 C methylated in CpG context: 14.8% C methylated in non-CpG context: 3.3%