CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 136070 548751 19.87 684821 2 206157 1078388 16.05 1284545 3 193847 1184792 14.06 1378639 4 217812 1051896 17.15 1269708 5 201796 1042648 16.22 1244444 6 208121 1068375 16.30 1276496 7 213913 1058221 16.82 1272134 8 219492 1128505 16.28 1347997 9 216428 1114102 16.27 1330530 10 212954 1125237 15.91 1338191 11 215278 1120575 16.12 1335853 12 206535 1062879 16.27 1269414 13 207434 1054325 16.44 1261759 14 207355 1044491 16.56 1251846 15 205780 1031533 16.63 1237313 16 208773 1051614 16.56 1260387 17 213921 1078745 16.55 1292666 18 213661 1099875 16.27 1313536 19 218118 1115325 16.36 1333443 20 219407 1125456 16.31 1344863 21 215652 1110485 16.26 1326137 22 214956 1098604 16.36 1313560 23 219010 1101400 16.59 1320410 24 214140 1066563 16.72 1280703 25 211681 1046213 16.83 1257894 26 215571 1075662 16.69 1291233 27 216760 1104956 16.40 1321716 28 217182 1112393 16.33 1329575 29 221481 1135034 16.33 1356515 30 218958 1135260 16.17 1354218 31 218895 1131782 16.21 1350677 32 219142 1126382 16.29 1345524 33 218048 1109755 16.42 1327803 34 218496 1097623 16.60 1316119 35 219337 1095864 16.68 1315201 36 219286 1102264 16.59 1321550 37 219393 1113108 16.46 1332501 38 221686 1136869 16.32 1358555 39 220136 1143148 16.15 1363284 40 222286 1142062 16.29 1364348 41 223711 1161334 16.15 1385045 42 220545 1152885 16.06 1373430 43 221373 1140650 16.25 1362023 44 224545 1135236 16.51 1359781 45 219853 1117278 16.44 1337131 46 222010 1117506 16.57 1339516 47 223722 1145388 16.34 1369110 48 220225 1150588 16.07 1370813 49 223685 1160188 16.16 1383873 50 224472 1168848 16.11 1393320 51 222272 1153467 16.16 1375739 52 221887 1151080 16.16 1372967 53 222828 1157524 16.14 1380352 54 223594 1149447 16.28 1373041 55 223059 1138345 16.38 1361404 56 223213 1141981 16.35 1365194 57 220807 1141769 16.21 1362576 58 222377 1151666 16.18 1374043 59 220569 1160289 15.97 1380858 60 218858 1158204 15.89 1377062 61 221208 1162921 15.98 1384129 62 221219 1167479 15.93 1388698 63 220034 1161802 15.92 1381836 64 220906 1154600 16.06 1375506 65 217773 1142584 16.01 1360357 66 216974 1133855 16.06 1350829 67 220356 1141273 16.18 1361629 68 217213 1152128 15.86 1369341 69 214397 1148454 15.73 1362851 70 214295 1148521 15.72 1362816 71 217344 1160820 15.77 1378164 72 214063 1156666 15.62 1370729 73 214327 1147027 15.74 1361354 74 211800 1133397 15.74 1345197 75 210656 1117324 15.86 1327980 76 210522 1116424 15.87 1326946 77 209485 1124623 15.70 1334108 78 208503 1131420 15.56 1339923 79 207593 1137134 15.44 1344727 80 207563 1146684 15.33 1354247 81 206315 1135372 15.38 1341687 82 205693 1128078 15.42 1333771 83 205390 1124923 15.44 1330313 84 202932 1117550 15.37 1320482 85 201246 1103016 15.43 1304262 86 200031 1094085 15.46 1294116 87 196872 1084672 15.36 1281544 88 197179 1089099 15.33 1286278 89 196259 1104427 15.09 1300686 90 195410 1106299 15.01 1301709 91 195388 1108422 14.99 1303810 92 195162 1106039 15.00 1301201 93 192077 1094237 14.93 1286314 94 190777 1081262 15.00 1272039 95 189305 1068825 15.05 1258130 96 186689 1050476 15.09 1237165 97 185156 1042959 15.08 1228115 98 184616 1052307 14.93 1236923 99 182648 1052301 14.79 1234949 100 182904 1059362 14.72 1242266 101 181481 1061862 14.60 1243343 102 179676 1049253 14.62 1228929 103 177747 1042030 14.57 1219777 104 176007 1037560 14.50 1213567 105 174835 1021107 14.62 1195942 106 172711 1004079 14.68 1176790 107 170945 999612 14.60 1170557 108 167322 986791 14.50 1154113 109 166006 988800 14.38 1154806 110 165512 998553 14.22 1164065 111 165434 998087 14.22 1163521 112 163464 992395 14.14 1155859 113 163074 989079 14.15 1152153 114 160015 973768 14.11 1133783 115 158552 959442 14.18 1117994 116 156136 949162 14.13 1105298 117 153786 935801 14.11 1089587 118 151956 928791 14.06 1080747 119 150668 928481 13.96 1079149 120 148864 927177 13.83 1076041 121 148143 925114 13.80 1073257 122 146621 921888 13.72 1068509 123 144324 912487 13.66 1056811 124 142669 898671 13.70 1041340 125 140809 887784 13.69 1028593 126 138149 871600 13.68 1009749 127 134859 862480 13.52 997339 128 133504 852687 13.54 986191 129 131375 842608 13.49 973983 130 129872 837579 13.42 967451 131 127781 833739 13.29 961520 132 125442 826646 13.18 952088 133 124440 814779 13.25 939219 134 122392 810586 13.12 932978 135 119944 795734 13.10 915678 136 119492 784449 13.22 903941 137 117411 779697 13.09 897108 138 114827 766813 13.02 881640 139 113161 756495 13.01 869656 140 111680 748829 12.98 860509 141 109701 739379 12.92 849080 142 106786 729225 12.77 836011 143 105583 720742 12.78 826325 144 103327 707866 12.74 811193 145 102118 697048 12.78 799166 146 99275 689834 12.58 789109 147 98214 678023 12.65 776237 148 96943 669163 12.65 766106 149 95122 662244 12.56 757366 150 90890 648851 12.29 739741 151 84068 600312 12.28 684380 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 9604 1262533 0.75 1272137 2 54425 1790410 2.95 1844835 3 52793 1953983 2.63 2006776 4 50798 1662976 2.96 1713774 5 50509 1556254 3.14 1606763 6 50286 1588210 3.07 1638496 7 54922 1642164 3.24 1697086 8 56702 1665214 3.29 1721916 9 55646 1666811 3.23 1722457 10 55381 1648346 3.25 1703727 11 56814 1654909 3.32 1711723 12 55940 1643366 3.29 1699306 13 56150 1623302 3.34 1679452 14 57183 1646666 3.36 1703849 15 57292 1647379 3.36 1704671 16 57199 1628472 3.39 1685671 17 59045 1636523 3.48 1695568 18 60136 1650868 3.51 1711004 19 61047 1653822 3.56 1714869 20 61490 1647048 3.60 1708538 21 61300 1654930 3.57 1716230 22 62637 1677866 3.60 1740503 23 61302 1690584 3.50 1751886 24 60624 1700048 3.44 1760672 25 61169 1689582 3.49 1750751 26 61577 1706196 3.48 1767773 27 61841 1696695 3.52 1758536 28 61873 1681251 3.55 1743124 29 63827 1698902 3.62 1762729 30 63646 1698007 3.61 1761653 31 63413 1706469 3.58 1769882 32 64203 1728068 3.58 1792271 33 62423 1733393 3.48 1795816 34 62779 1735376 3.49 1798155 35 62961 1760862 3.45 1823823 36 61694 1749025 3.41 1810719 37 62360 1726673 3.49 1789033 38 62942 1732850 3.50 1795792 39 63179 1733777 3.52 1796956 40 63756 1735091 3.54 1798847 41 63647 1752380 3.50 1816027 42 62834 1764325 3.44 1827159 43 63179 1771020 3.44 1834199 44 63024 1798421 3.39 1861445 45 61765 1789461 3.34 1851226 46 61336 1782101 3.33 1843437 47 62105 1780480 3.37 1842585 48 62204 1769173 3.40 1831377 49 62294 1750416 3.44 1812710 50 62382 1752086 3.44 1814468 51 62113 1757044 3.41 1819157 52 62946 1761804 3.45 1824750 53 62634 1787609 3.39 1850243 54 61804 1802652 3.31 1864456 55 61448 1805799 3.29 1867247 56 61869 1804733 3.31 1866602 57 61237 1789598 3.31 1850835 58 60486 1767248 3.31 1827734 59 60921 1763224 3.34 1824145 60 61396 1755965 3.38 1817361 61 60872 1755970 3.35 1816842 62 61242 1782121 3.32 1843363 63 61166 1797640 3.29 1858806 64 60872 1791941 3.29 1852813 65 61158 1815573 3.26 1876731 66 60138 1809923 3.22 1870061 67 59802 1791051 3.23 1850853 68 59674 1783738 3.24 1843412 69 59014 1752132 3.26 1811146 70 59309 1741358 3.29 1800667 71 59960 1766655 3.28 1826615 72 58996 1766233 3.23 1825229 73 58751 1754730 3.24 1813481 74 59416 1778433 3.23 1837849 75 58524 1786236 3.17 1844760 76 58570 1777374 3.19 1835944 77 57690 1779797 3.14 1837487 78 57742 1764274 3.17 1822016 79 57472 1741856 3.19 1799328 80 58216 1744975 3.23 1803191 81 57686 1726422 3.23 1784108 82 57603 1719141 3.24 1776744 83 57347 1735325 3.20 1792672 84 56560 1730637 3.16 1787197 85 56018 1733356 3.13 1789374 86 55380 1730542 3.10 1785922 87 55574 1714905 3.14 1770479 88 55042 1703814 3.13 1758856 89 54605 1697587 3.12 1752192 90 55094 1684262 3.17 1739356 91 55802 1683367 3.21 1739169 92 55072 1685011 3.16 1740083 93 54341 1674491 3.14 1728832 94 53817 1666584 3.13 1720401 95 53746 1676020 3.11 1729766 96 52714 1658618 3.08 1711332 97 52099 1644729 3.07 1696828 98 52253 1639904 3.09 1692157 99 52269 1630501 3.11 1682770 100 52050 1612337 3.13 1664387 101 52258 1611007 3.14 1663265 102 51922 1601313 3.14 1653235 103 51255 1595778 3.11 1647033 104 51216 1597483 3.11 1648699 105 50102 1587025 3.06 1637127 106 49408 1577936 3.04 1627344 107 48775 1561203 3.03 1609978 108 48594 1541085 3.06 1589679 109 48298 1532671 3.05 1580969 110 49223 1534476 3.11 1583699 111 48726 1521765 3.10 1570491 112 48478 1512989 3.10 1561467 113 48320 1510387 3.10 1558707 114 47275 1493083 3.07 1540358 115 46479 1480020 3.04 1526499 116 46642 1475221 3.06 1521863 117 45951 1457140 3.06 1503091 118 45204 1437585 3.05 1482789 119 45078 1430365 3.06 1475443 120 44735 1412696 3.07 1457431 121 44824 1406289 3.09 1451113 122 44417 1398276 3.08 1442693 123 43995 1380780 3.09 1424775 124 43013 1367411 3.05 1410424 125 42803 1352950 3.07 1395753 126 42132 1332617 3.06 1374749 127 41308 1315659 3.04 1356967 128 40638 1300370 3.03 1341008 129 40173 1281882 3.04 1322055 130 40045 1271444 3.05 1311489 131 39610 1264209 3.04 1303819 132 39238 1248991 3.05 1288229 133 38642 1236773 3.03 1275415 134 38197 1226422 3.02 1264619 135 37729 1205220 3.04 1242949 136 37529 1188028 3.06 1225557 137 36895 1177855 3.04 1214750 138 36402 1155930 3.05 1192332 139 36254 1142318 3.08 1178572 140 35603 1126871 3.06 1162474 141 35034 1109564 3.06 1144598 142 34890 1093545 3.09 1128435 143 34103 1081091 3.06 1115194 144 33534 1065177 3.05 1098711 145 33196 1051408 3.06 1084604 146 33400 1036351 3.12 1069751 147 34576 1018140 3.28 1052716 148 33789 1002851 3.26 1036640 149 33039 989339 3.23 1022378 150 31443 964141 3.16 995584 151 27698 910847 2.95 938545 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 42374 5352647 0.79 5395021 2 234712 7334240 3.10 7568952 3 266409 7089526 3.62 7355935 4 201139 5734595 3.39 5935734 5 184338 5545067 3.22 5729405 6 193869 5945020 3.16 6138889 7 210961 6145558 3.32 6356519 8 221877 6407792 3.35 6629669 9 222133 6462438 3.32 6684571 10 223926 6501756 3.33 6725682 11 235147 6624061 3.43 6859208 12 225329 6449073 3.38 6674402 13 227329 6370306 3.45 6597635 14 227373 6306804 3.48 6534177 15 223011 6195862 3.47 6418873 16 224885 6168704 3.52 6393589 17 232056 6228969 3.59 6461025 18 238019 6300180 3.64 6538199 19 243844 6381865 3.68 6625709 20 249552 6538298 3.68 6787850 21 251724 6580539 3.68 6832263 22 253029 6547825 3.72 6800854 23 247827 6574990 3.63 6822817 24 241315 6501775 3.58 6743090 25 238453 6352530 3.62 6590983 26 237856 6310055 3.63 6547911 27 239647 6339785 3.64 6579432 28 246608 6372740 3.73 6619348 29 254522 6546154 3.74 6800676 30 255938 6621825 3.72 6877763 31 259126 6682514 3.73 6941640 32 256770 6714012 3.68 6970782 33 252778 6652138 3.66 6904916 34 248232 6585289 3.63 6833521 35 242741 6555635 3.57 6798376 36 238883 6463058 3.56 6701941 37 243998 6449314 3.65 6693312 38 247633 6548634 3.64 6796267 39 252231 6603991 3.68 6856222 40 255817 6682951 3.69 6938768 41 255202 6777816 3.63 7033018 42 251210 6749399 3.59 7000609 43 251937 6724696 3.61 6976633 44 247240 6724396 3.55 6971636 45 240796 6622515 3.51 6863311 46 237789 6527112 3.52 6764901 47 238222 6542108 3.51 6780330 48 239784 6514161 3.55 6753945 49 245849 6565905 3.61 6811754 50 249379 6694434 3.59 6943813 51 248689 6700978 3.58 6949667 52 249051 6714727 3.58 6963778 53 246801 6758173 3.52 7004974 54 242629 6726791 3.48 6969420 55 240097 6677095 3.47 6917192 56 238252 6671446 3.45 6909698 57 236111 6601762 3.45 6837873 58 238492 6597195 3.49 6835687 59 241248 6631813 3.51 6873061 60 244161 6670852 3.53 6915013 61 247258 6768676 3.52 7015934 62 246179 6827332 3.48 7073511 63 242303 6779565 3.45 7021868 64 238805 6733755 3.42 6972560 65 234879 6723055 3.38 6957934 66 232480 6632492 3.39 6864972 67 232349 6628333 3.39 6860682 68 233089 6664187 3.38 6897276 69 233476 6621935 3.41 6855411 70 236803 6646927 3.44 6883730 71 238636 6751784 3.41 6990420 72 237343 6748279 3.40 6985622 73 235335 6722911 3.38 6958246 74 232886 6703171 3.36 6936057 75 226386 6606143 3.31 6832529 76 223671 6559485 3.30 6783156 77 223538 6543281 3.30 6766819 78 222852 6510785 3.31 6733637 79 226981 6528155 3.36 6755136 80 229977 6586708 3.37 6816685 81 231795 6594272 3.40 6826067 82 231073 6625795 3.37 6856868 83 229877 6658365 3.34 6888242 84 226378 6582944 3.32 6809322 85 221993 6522247 3.29 6744240 86 216674 6466568 3.24 6683242 87 214329 6375967 3.25 6590296 88 214910 6341032 3.28 6555942 89 216490 6387970 3.28 6604460 90 219054 6407082 3.31 6626136 91 222372 6469873 3.32 6692245 92 221770 6504789 3.30 6726559 93 218383 6468631 3.27 6687014 94 217537 6437289 3.27 6654826 95 213004 6381138 3.23 6594142 96 208070 6280271 3.21 6488341 97 204716 6208376 3.19 6413092 98 204184 6195495 3.19 6399679 99 204714 6163591 3.21 6368305 100 207429 6172102 3.25 6379531 101 209287 6221350 3.25 6430637 102 209310 6218262 3.26 6427572 103 208495 6196459 3.26 6404954 104 205803 6181522 3.22 6387325 105 200540 6099614 3.18 6300154 106 197862 6011141 3.19 6209003 107 195578 5949501 3.18 6145079 108 191653 5856639 3.17 6048292 109 192448 5812221 3.20 6004669 110 194092 5841146 3.22 6035238 111 194723 5837231 3.23 6031954 112 194988 5838613 3.23 6033601 113 194616 5840804 3.22 6035420 114 190710 5772204 3.20 5962914 115 187029 5706494 3.17 5893523 116 184366 5649367 3.16 5833733 117 181947 5556571 3.17 5738518 118 180309 5497748 3.18 5678057 119 179370 5462721 3.18 5642091 120 178743 5422688 3.19 5601431 121 179059 5414578 3.20 5593637 122 178258 5413418 3.19 5591676 123 176069 5359733 3.18 5535802 124 173687 5306762 3.17 5480449 125 170774 5250576 3.15 5421350 126 168337 5160811 3.16 5329148 127 165912 5094121 3.15 5260033 128 163307 5041877 3.14 5205184 129 162082 4976232 3.15 5138314 130 160873 4936709 3.16 5097582 131 159739 4908345 3.15 5068084 132 158011 4863515 3.15 5021526 133 156908 4809145 3.16 4966053 134 154518 4767279 3.14 4921797 135 152525 4691487 3.15 4844012 136 151159 4630258 3.16 4781417 137 147500 4572936 3.12 4720436 138 145701 4502878 3.13 4648579 139 144085 4444461 3.14 4588546 140 142393 4404288 3.13 4546681 141 141454 4334714 3.16 4476168 142 139325 4279975 3.15 4419300 143 138070 4235167 3.16 4373237 144 135714 4167482 3.15 4303196 145 134434 4102781 3.17 4237215 146 133816 4064181 3.19 4197997 147 134628 4006267 3.25 4140895 148 133303 3951916 3.26 4085219 149 131109 3888886 3.26 4019995 150 126719 3801164 3.23 3927883 151 109315 3621461 2.93 3730776 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 14102 571798 2.41 585900 2 28389 518592 5.19 546981 3 58682 610892 8.76 669574 4 69660 638673 9.83 708333 5 69208 611922 10.16 681130 6 61014 585811 9.43 646825 7 63025 583764 9.74 646789 8 61335 564916 9.79 626251 9 65119 596389 9.84 661508 10 65298 567258 10.32 632556 11 64537 559736 10.34 624273 12 65612 549174 10.67 614786 13 62256 507794 10.92 570050 14 60909 499874 10.86 560783 15 59836 483670 11.01 543506 16 58776 469724 11.12 528500 17 59495 468479 11.27 527974 18 59586 467646 11.30 527232 19 59164 463448 11.32 522612 20 59039 458015 11.42 517054 21 58821 451389 11.53 510210 22 58109 438013 11.71 496122 23 56394 425977 11.69 482371 24 55940 417400 11.82 473340 25 54582 401617 11.96 456199 26 53726 391281 12.07 445007 27 53376 390673 12.02 444049 28 52773 387685 11.98 440458 29 52534 384545 12.02 437079 30 52339 381053 12.08 433392 31 51465 371599 12.16 423064 32 50854 366564 12.18 417418 33 49744 355623 12.27 405367 34 49066 345171 12.45 394237 35 48122 336867 12.50 384989 36 47823 330574 12.64 378397 37 46928 325686 12.59 372614 38 46728 322509 12.66 369237 39 45900 321470 12.49 367370 40 44874 316705 12.41 361579 41 44616 310353 12.57 354969 42 44701 307291 12.70 351992 43 43259 299647 12.62 342906 44 43219 293075 12.85 336294 45 42860 288203 12.95 331063 46 41298 278398 12.92 319696 47 41033 275396 12.97 316429 48 40958 274635 12.98 315593 49 40187 270040 12.95 310227 50 39677 267040 12.94 306717 51 39435 264928 12.96 304363 52 38253 257908 12.92 296161 53 38294 253321 13.13 291615 54 37677 250875 13.06 288552 55 36912 244483 13.12 281395 56 36968 239794 13.36 276762 57 35966 235491 13.25 271457 58 35487 232194 13.26 267681 59 35108 229771 13.25 264879 60 34723 226861 13.27 261584 61 33868 223197 13.17 257065 62 34063 221089 13.35 255152 63 33418 218537 13.26 251955 64 33092 212964 13.45 246056 65 32583 210360 13.41 242943 66 32315 204419 13.65 236734 67 31474 201865 13.49 233339 68 31459 199485 13.62 230944 69 30848 198600 13.44 229448 70 30292 194663 13.47 224955 71 30273 192213 13.61 222486 72 29931 190433 13.58 220364 73 29338 187219 13.55 216557 74 29229 184382 13.68 213611 75 28431 180109 13.63 208540 76 28060 176120 13.74 204180 77 28273 173304 14.03 201577 78 27459 171972 13.77 199431 79 27178 170453 13.75 197631 80 26811 169038 13.69 195849 81 26700 167565 13.74 194265 82 26076 164216 13.70 190292 83 25990 162032 13.82 188022 84 25384 159479 13.73 184863 85 25197 156628 13.86 181825 86 24995 153941 13.97 178936 87 24214 150795 13.84 175009 88 23976 148078 13.94 172054 89 23792 146486 13.97 170278 90 23708 146601 13.92 170309 91 23177 145439 13.75 168616 92 23004 142884 13.87 165888 93 22748 140795 13.91 163543 94 22576 137962 14.06 160538 95 22369 136103 14.12 158472 96 21866 132872 14.13 154738 97 21455 131087 14.06 152542 98 21115 128368 14.13 149483 99 20866 128364 13.98 149230 100 20509 126417 13.96 146926 101 20543 124834 14.13 145377 102 20301 123955 14.07 144256 103 19863 121193 14.08 141056 104 19406 119825 13.94 139231 105 19547 118119 14.20 137666 106 18924 116137 14.01 135061 107 18722 113274 14.18 131996 108 18537 112633 14.13 131170 109 18143 109197 14.25 127340 110 17666 108408 14.01 126074 111 17713 107839 14.11 125552 112 17755 107187 14.21 124942 113 17366 106039 14.07 123405 114 17134 103729 14.18 120863 115 17082 101688 14.38 118770 116 16739 100217 14.31 116956 117 16444 98826 14.27 115270 118 16198 97042 14.30 113240 119 15718 95100 14.18 110818 120 15818 94113 14.39 109931 121 15363 93529 14.11 108892 122 15385 92987 14.20 108372 123 15275 91625 14.29 106900 124 14951 90157 14.22 105108 125 14634 88224 14.23 102858 126 14485 87035 14.27 101520 127 14235 84970 14.35 99205 128 13828 83922 14.15 97750 129 13912 82571 14.42 96483 130 13647 81090 14.41 94737 131 13270 80408 14.17 93678 132 13346 79357 14.40 92703 133 13100 77963 14.39 91063 134 12861 77192 14.28 90053 135 12705 76491 14.24 89196 136 12605 74757 14.43 87362 137 12362 73131 14.46 85493 138 12276 72561 14.47 84837 139 11821 71562 14.18 83383 140 11717 70381 14.27 82098 141 11603 69336 14.34 80939 142 11483 67797 14.48 79280 143 11530 67325 14.62 78855 144 11130 66142 14.40 77272 145 10868 65514 14.23 76382 146 10669 64288 14.23 74957 147 10573 62850 14.40 73423 148 10479 61559 14.55 72038 149 10095 59846 14.43 69941 150 9732 51879 15.80 61611 151 8628 0 100.00 8628 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 26662 1024641 2.54 1051303 2 25031 722717 3.35 747748 3 32944 803140 3.94 836084 4 54026 861459 5.90 915485 5 35860 1013196 3.42 1049056 6 29767 898570 3.21 928337 7 28330 805352 3.40 833682 8 29091 793586 3.54 822677 9 28735 807645 3.44 836380 10 28581 803038 3.44 831619 11 26909 779065 3.34 805974 12 26224 758848 3.34 785072 13 25489 748060 3.30 773549 14 24479 728673 3.25 753152 15 22965 708487 3.14 731452 16 22903 698320 3.18 721223 17 22717 684787 3.21 707504 18 22699 672042 3.27 694741 19 22057 662541 3.22 684598 20 21673 652496 3.21 674169 21 21610 639435 3.27 661045 22 20749 627696 3.20 648445 23 20376 617250 3.20 637626 24 19926 609595 3.17 629521 25 19383 601276 3.12 620659 26 19080 591304 3.13 610384 27 18764 580880 3.13 599644 28 18596 574017 3.14 592613 29 18387 564236 3.16 582623 30 17778 551430 3.12 569208 31 17902 544851 3.18 562753 32 16938 531708 3.09 548646 33 16783 523122 3.11 539905 34 16409 516192 3.08 532601 35 15933 509420 3.03 525353 36 15467 499046 3.01 514513 37 15453 496582 3.02 512035 38 15261 488446 3.03 503707 39 14977 477928 3.04 492905 40 14683 469997 3.03 484680 41 14369 460487 3.03 474856 42 14173 451571 3.04 465744 43 13763 446624 2.99 460387 44 13482 441266 2.96 454748 45 13240 434519 2.96 447759 46 12878 431948 2.90 444826 47 12632 421702 2.91 434334 48 12291 417126 2.86 429417 49 11999 410884 2.84 422883 50 12109 402010 2.92 414119 51 11726 393771 2.89 405497 52 11638 387248 2.92 398886 53 11372 381417 2.90 392789 54 11000 374865 2.85 385865 55 10632 372160 2.78 382792 56 10623 369259 2.80 379882 57 10398 363960 2.78 374358 58 10450 357885 2.84 368335 59 10065 351112 2.79 361177 60 9937 344169 2.81 354106 61 9621 338834 2.76 348455 62 9395 331910 2.75 341305 63 9348 326166 2.79 335514 64 9183 325956 2.74 335139 65 8947 322520 2.70 331467 66 8751 318122 2.68 326873 67 8907 316089 2.74 324996 68 8415 310840 2.64 319255 69 8614 304570 2.75 313184 70 8296 299691 2.69 307987 71 8098 292455 2.69 300553 72 7945 287303 2.69 295248 73 7814 285339 2.67 293153 74 7689 280651 2.67 288340 75 7542 277459 2.65 285001 76 7382 276845 2.60 284227 77 7376 273173 2.63 280549 78 6988 268665 2.54 275653 79 7067 265712 2.59 272779 80 6823 261724 2.54 268547 81 6937 255641 2.64 262578 82 6879 253010 2.65 259889 83 6576 249390 2.57 255966 84 6540 243472 2.62 250012 85 6223 242504 2.50 248727 86 6198 239424 2.52 245622 87 6117 236633 2.52 242750 88 5988 233449 2.50 239437 89 6015 230047 2.55 236062 90 5938 225138 2.57 231076 91 5764 224095 2.51 229859 92 5566 220040 2.47 225606 93 5637 216355 2.54 221992 94 5493 212991 2.51 218484 95 5403 210780 2.50 216183 96 5309 207862 2.49 213171 97 5267 206218 2.49 211485 98 5024 202963 2.42 207987 99 4959 200236 2.42 205195 100 4977 197485 2.46 202462 101 5025 194261 2.52 199286 102 4774 190846 2.44 195620 103 4721 187590 2.45 192311 104 4694 184161 2.49 188855 105 4543 182620 2.43 187163 106 4478 180405 2.42 184883 107 4331 177880 2.38 182211 108 4342 176232 2.40 180574 109 4296 173221 2.42 177517 110 4118 170153 2.36 174271 111 4093 168472 2.37 172565 112 4059 166106 2.39 170165 113 4114 163990 2.45 168104 114 3924 161434 2.37 165358 115 3839 160479 2.34 164318 116 3658 156310 2.29 159968 117 3686 154598 2.33 158284 118 3642 153238 2.32 156880 119 3589 150057 2.34 153646 120 3567 148078 2.35 151645 121 3417 146109 2.29 149526 122 3408 143468 2.32 146876 123 3326 141202 2.30 144528 124 3374 140275 2.35 143649 125 3234 137015 2.31 140249 126 3082 135105 2.23 138187 127 3088 132783 2.27 135871 128 3131 129813 2.36 132944 129 3097 129179 2.34 132276 130 2981 126668 2.30 129649 131 2902 124858 2.27 127760 132 2876 123627 2.27 126503 133 2816 121272 2.27 124088 134 2805 119722 2.29 122527 135 2673 117733 2.22 120406 136 2760 116411 2.32 119171 137 2701 114523 2.30 117224 138 2563 112797 2.22 115360 139 2578 111139 2.27 113717 140 2470 108759 2.22 111229 141 2478 107494 2.25 109972 142 2559 105970 2.36 108529 143 2391 104000 2.25 106391 144 2410 101650 2.32 104060 145 2316 100995 2.24 103311 146 2244 98570 2.23 100814 147 2275 96664 2.30 98939 148 2198 95553 2.25 97751 149 2121 93141 2.23 95262 150 1939 83023 2.28 84962 151 798 0 100.00 798 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 84078 3514603 2.34 3598681 2 112606 3281819 3.32 3394425 3 122328 3178199 3.71 3300527 4 124551 3118365 3.84 3242916 5 122775 3558330 3.34 3681105 6 126058 3692947 3.30 3819005 7 126423 3534026 3.45 3660449 8 120969 3344558 3.49 3465527 9 117462 3354073 3.38 3471535 10 114439 3212671 3.44 3327110 11 112185 3136562 3.45 3248747 12 106408 2990755 3.44 3097163 13 101375 2875155 3.41 2976530 14 98415 2848464 3.34 2946879 15 96455 2799109 3.33 2895564 16 93924 2756890 3.29 2850814 17 95071 2760562 3.33 2855633 18 94583 2735558 3.34 2830141 19 94321 2705053 3.37 2799374 20 92984 2663700 3.37 2756684 21 90906 2604319 3.37 2695225 22 88325 2514259 3.39 2602584 23 84306 2450311 3.33 2534617 24 83128 2405536 3.34 2488664 25 80767 2349895 3.32 2430662 26 80038 2328958 3.32 2408996 27 79616 2322859 3.31 2402475 28 78944 2299467 3.32 2378411 29 79163 2278808 3.36 2357971 30 77453 2234696 3.35 2312149 31 75522 2181337 3.35 2256859 32 73557 2128569 3.34 2202126 33 71418 2069103 3.34 2140521 34 68358 2015814 3.28 2084172 35 66493 1990062 3.23 2056555 36 66092 1967136 3.25 2033228 37 64836 1951873 3.21 2016709 38 64464 1940170 3.22 2004634 39 64881 1916522 3.27 1981403 40 63552 1882510 3.27 1946062 41 61976 1849132 3.24 1911108 42 60641 1804009 3.25 1864650 43 58067 1758339 3.20 1816406 44 56423 1724396 3.17 1780819 45 54475 1694752 3.11 1749227 46 53584 1666329 3.12 1719913 47 52976 1660465 3.09 1713441 48 53059 1640180 3.13 1693239 49 51690 1621706 3.09 1673396 50 51735 1610705 3.11 1662440 51 50811 1578139 3.12 1628950 52 49108 1542015 3.09 1591123 53 48297 1514502 3.09 1562799 54 46814 1480942 3.06 1527756 55 45373 1453672 3.03 1499045 56 44229 1437050 2.99 1481279 57 43530 1421283 2.97 1464813 58 42769 1404083 2.96 1446852 59 42750 1391947 2.98 1434697 60 42203 1371524 2.99 1413727 61 41100 1356062 2.94 1397162 62 40888 1326923 2.99 1367811 63 39324 1295529 2.95 1334853 64 38534 1272214 2.94 1310748 65 37288 1252640 2.89 1289928 66 36699 1232652 2.89 1269351 67 35914 1225570 2.85 1261484 68 35525 1215270 2.84 1250795 69 35253 1197545 2.86 1232798 70 34619 1179399 2.85 1214018 71 34264 1166326 2.85 1200590 72 33838 1148331 2.86 1182169 73 32911 1124662 2.84 1157573 74 31949 1103237 2.81 1135186 75 31064 1083261 2.79 1114325 76 30447 1068201 2.77 1098648 77 30088 1059103 2.76 1089191 78 29946 1049293 2.77 1079239 79 29544 1038607 2.77 1068151 80 29012 1028342 2.74 1057354 81 28770 1014820 2.76 1043590 82 28208 1001336 2.74 1029544 83 27820 983058 2.75 1010878 84 26846 963329 2.71 990175 85 26302 943786 2.71 970088 86 25617 928776 2.68 954393 87 25087 917458 2.66 942545 88 24589 909300 2.63 933889 89 24443 905360 2.63 929803 90 24355 896346 2.65 920701 91 24304 882001 2.68 906305 92 23716 870880 2.65 894596 93 23554 854715 2.68 878269 94 22792 837953 2.65 860745 95 21955 820659 2.61 842614 96 21633 808611 2.61 830244 97 21249 798137 2.59 819386 98 20571 789135 2.54 809706 99 20644 782907 2.57 803551 100 20438 774388 2.57 794826 101 20190 766593 2.57 786783 102 20110 755752 2.59 775862 103 19539 741265 2.57 760804 104 19381 729853 2.59 749234 105 18901 717326 2.57 736227 106 18202 703849 2.52 722051 107 17863 693726 2.51 711589 108 17717 684583 2.52 702300 109 17356 678822 2.49 696178 110 17210 674068 2.49 691278 111 17211 668063 2.51 685274 112 16954 656618 2.52 673572 113 16480 646597 2.49 663077 114 16203 635983 2.48 652186 115 15917 623143 2.49 639060 116 15700 613103 2.50 628803 117 15158 606520 2.44 621678 118 14719 596980 2.41 611699 119 14736 590528 2.43 605264 120 14693 584088 2.45 598781 121 14552 577013 2.46 591565 122 14234 568986 2.44 583220 123 14053 560021 2.45 574074 124 13864 549831 2.46 563695 125 13701 539716 2.48 553417 126 13270 532628 2.43 545898 127 12904 523968 2.40 536872 128 13079 515921 2.47 529000 129 12438 510539 2.38 522977 130 12411 504212 2.40 516623 131 12093 500173 2.36 512266 132 11947 492000 2.37 503947 133 11995 482369 2.43 494364 134 11648 476808 2.38 488456 135 11515 467565 2.40 479080 136 11299 460526 2.39 471825 137 11028 454053 2.37 465081 138 10849 447516 2.37 458365 139 10501 441286 2.32 451787 140 10561 433246 2.38 443807 141 10245 427551 2.34 437796 142 10021 421074 2.32 431095 143 10018 416893 2.35 426911 144 9733 407660 2.33 417393 145 9633 400569 2.35 410202 146 9635 393543 2.39 403178 147 9497 386547 2.40 396044 148 9251 378709 2.38 387960 149 8968 370180 2.37 379148 150 8183 333563 2.39 341746 151 2943 0 100.00 2943