ERR10684003.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 55245680 lines in total Total number of methylation call strings processed: 110491360 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1730274070 Total methylated C's in CpG context: 34049387 Total methylated C's in CHG context: 15348672 Total methylated C's in CHH context: 62326784 Total C to T conversions in CpG context: 193421772 Total C to T conversions in CHG context: 293150330 Total C to T conversions in CHH context: 1131977125 C methylated in CpG context: 15.0% C methylated in non-CpG context: 5.2%