CpG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 124303 475974 20.71 600277 2 167211 913750 15.47 1080961 3 158521 1074093 12.86 1232614 4 185676 962892 16.17 1148568 5 177094 973627 15.39 1150721 6 182626 1003517 15.40 1186143 7 189913 992350 16.06 1182263 8 192633 1067309 15.29 1259942 9 187485 1042493 15.24 1229978 10 184396 1054646 14.88 1239042 11 188879 1057729 15.15 1246608 12 178653 992197 15.26 1170850 13 179888 988110 15.40 1167998 14 178433 968658 15.56 1147091 15 178215 958092 15.68 1136307 16 180655 976004 15.62 1156659 17 183218 999659 15.49 1182877 18 184998 1024891 15.29 1209889 19 187722 1042109 15.26 1229831 20 188709 1048331 15.25 1237040 21 185862 1039274 15.17 1225136 22 184168 1026142 15.22 1210310 23 188860 1024456 15.57 1213316 24 185076 986348 15.80 1171424 25 180760 966406 15.76 1147166 26 185152 995941 15.68 1181093 27 187066 1026866 15.41 1213932 28 187053 1037896 15.27 1224949 29 189597 1057395 15.20 1246992 30 188894 1060795 15.12 1249689 31 188521 1060307 15.10 1248828 32 189740 1050840 15.29 1240580 33 187730 1036747 15.33 1224477 34 188725 1020722 15.60 1209447 35 189357 1017775 15.69 1207132 36 188940 1024187 15.57 1213127 37 188797 1035816 15.42 1224613 38 189874 1058459 15.21 1248333 39 190092 1067148 15.12 1257240 40 191090 1068662 15.17 1259752 41 192297 1084496 15.06 1276793 42 189776 1077789 14.97 1267565 43 191118 1066118 15.20 1257236 44 193309 1059244 15.43 1252553 45 191017 1040647 15.51 1231664 46 191913 1039984 15.58 1231897 47 192855 1063312 15.35 1256167 48 190910 1072820 15.11 1263730 49 192989 1083728 15.12 1276717 50 194239 1090441 15.12 1284680 51 192775 1080632 15.14 1273407 52 191289 1077083 15.08 1268372 53 192736 1084343 15.09 1277079 54 193358 1075862 15.23 1269220 55 193523 1062449 15.41 1255972 56 191882 1062742 15.29 1254624 57 191819 1065230 15.26 1257049 58 192433 1074440 15.19 1266873 59 191002 1083240 14.99 1274242 60 189999 1086575 14.88 1276574 61 193337 1089148 15.08 1282485 62 192297 1089937 15.00 1282234 63 191788 1085257 15.02 1277045 64 192081 1081527 15.08 1273608 65 191299 1067191 15.20 1258490 66 190330 1059834 15.22 1250164 67 192549 1070545 15.24 1263094 68 190453 1081664 14.97 1272117 69 186762 1075412 14.80 1262174 70 187558 1075374 14.85 1262932 71 190560 1090068 14.88 1280628 72 187705 1087204 14.72 1274909 73 187478 1075683 14.84 1263161 74 185691 1061513 14.89 1247204 75 185319 1049511 15.01 1234830 76 185800 1046032 15.08 1231832 77 185430 1055069 14.95 1240499 78 185203 1065209 14.81 1250412 79 183716 1073267 14.62 1256983 80 183085 1081054 14.48 1264139 81 181582 1069657 14.51 1251239 82 182557 1062215 14.67 1244772 83 180837 1060774 14.56 1241611 84 180880 1053969 14.65 1234849 85 179079 1038769 14.70 1217848 86 178003 1028523 14.75 1206526 87 175063 1021840 14.63 1196903 88 175326 1029530 14.55 1204856 89 174658 1044761 14.32 1219419 90 175058 1048646 14.31 1223704 91 174007 1051006 14.20 1225013 92 173044 1050798 14.14 1223842 93 173193 1037906 14.30 1211099 94 171741 1027430 14.32 1199171 95 169344 1013391 14.32 1182735 96 167235 996120 14.38 1163355 97 165780 988270 14.37 1154050 98 165098 996644 14.21 1161742 99 164429 1002215 14.09 1166644 100 163168 1008732 13.92 1171900 101 162173 1012064 13.81 1174237 102 161172 1004051 13.83 1165223 103 159909 997497 13.82 1157406 104 159569 992325 13.85 1151894 105 158219 977286 13.93 1135505 106 156139 958253 14.01 1114392 107 153851 949490 13.94 1103341 108 151640 940127 13.89 1091767 109 150076 943092 13.73 1093168 110 149756 954854 13.56 1104610 111 149470 959043 13.48 1108513 112 148608 956889 13.44 1105497 113 147844 948555 13.48 1096399 114 145973 936149 13.49 1082122 115 143796 922356 13.49 1066152 116 141830 911618 13.46 1053448 117 139882 902257 13.42 1042139 118 138383 892060 13.43 1030443 119 136758 892544 13.29 1029302 120 136055 893258 13.22 1029313 121 134599 897217 13.04 1031816 122 133258 893348 12.98 1026606 123 131975 884874 12.98 1016849 124 130693 870865 13.05 1001558 125 128842 860507 13.02 989349 126 125803 843571 12.98 969374 127 122923 834689 12.84 957612 128 121337 827175 12.79 948512 129 119274 817100 12.74 936374 130 117474 814685 12.60 932159 131 115599 811007 12.48 926606 132 114229 805158 12.42 919387 133 113398 795879 12.47 909277 134 110675 787618 12.32 898293 135 109093 776910 12.31 886003 136 107847 765539 12.35 873386 137 105877 758284 12.25 864161 138 103580 747998 12.16 851578 139 102089 736894 12.17 838983 140 99663 731363 11.99 831026 141 98691 719403 12.06 818094 142 96470 711203 11.94 807673 143 94931 701270 11.92 796201 144 92405 689565 11.82 781970 145 91095 678560 11.84 769655 146 88852 671822 11.68 760674 147 87838 661343 11.72 749181 148 85908 647716 11.71 733624 149 84390 640366 11.64 724756 150 80391 628958 11.33 709349 151 73600 576349 11.32 649949 CHG context (R1) ================ position count methylated count unmethylated % methylation coverage 1 7506 1141070 0.65 1148576 2 29999 1552807 1.90 1582806 3 31678 1781617 1.75 1813295 4 29301 1534891 1.87 1564192 5 29675 1453004 2.00 1482679 6 29649 1494076 1.95 1523725 7 32979 1558601 2.07 1591580 8 33676 1557983 2.12 1591659 9 32494 1555227 2.05 1587721 10 32610 1540145 2.07 1572755 11 33666 1545690 2.13 1579356 12 32648 1536405 2.08 1569053 13 33148 1513924 2.14 1547072 14 32745 1524640 2.10 1557385 15 33419 1531818 2.14 1565237 16 33722 1516314 2.18 1550036 17 33598 1519725 2.16 1553323 18 34569 1530352 2.21 1564921 19 35137 1535989 2.24 1571126 20 34855 1532746 2.22 1567601 21 35034 1538645 2.23 1573679 22 35652 1562601 2.23 1598253 23 35250 1565089 2.20 1600339 24 35072 1574747 2.18 1609819 25 34622 1575528 2.15 1610150 26 35208 1583886 2.17 1619094 27 35082 1579547 2.17 1614629 28 35094 1568734 2.19 1603828 29 36028 1579809 2.23 1615837 30 36443 1584538 2.25 1620981 31 36220 1590644 2.23 1626864 32 36481 1605171 2.22 1641652 33 35623 1614736 2.16 1650359 34 35810 1623771 2.16 1659581 35 35923 1640019 2.14 1675942 36 35415 1635413 2.12 1670828 37 35857 1613607 2.17 1649464 38 35808 1614896 2.17 1650704 39 36365 1622059 2.19 1658424 40 36542 1624642 2.20 1661184 41 36750 1638497 2.19 1675247 42 36460 1648510 2.16 1684970 43 36589 1657660 2.16 1694249 44 35995 1683522 2.09 1719517 45 35756 1677558 2.09 1713314 46 35396 1670893 2.07 1706289 47 35449 1667413 2.08 1702862 48 35675 1651564 2.11 1687239 49 35689 1637916 2.13 1673605 50 35771 1636913 2.14 1672684 51 35850 1642506 2.14 1678356 52 36038 1653753 2.13 1689791 53 35893 1673344 2.10 1709237 54 35664 1690231 2.07 1725895 55 35829 1695272 2.07 1731101 56 35202 1695652 2.03 1730854 57 35125 1679554 2.05 1714679 58 34388 1657184 2.03 1691572 59 35417 1649375 2.10 1684792 60 35444 1643791 2.11 1679235 61 35063 1646936 2.08 1681999 62 35149 1668578 2.06 1703727 63 35362 1684335 2.06 1719697 64 34953 1687101 2.03 1722054 65 35248 1706989 2.02 1742237 66 35015 1701370 2.02 1736385 67 34612 1691408 2.01 1726020 68 34616 1676677 2.02 1711293 69 34244 1643303 2.04 1677547 70 34139 1637046 2.04 1671185 71 34477 1657218 2.04 1691695 72 34672 1661451 2.04 1696123 73 34438 1655805 2.04 1690243 74 34080 1672809 2.00 1706889 75 34392 1686575 2.00 1720967 76 34248 1686116 1.99 1720364 77 33898 1680193 1.98 1714091 78 33812 1666368 1.99 1700180 79 33840 1651795 2.01 1685635 80 34194 1644928 2.04 1679122 81 33680 1629668 2.02 1663348 82 33641 1625283 2.03 1658924 83 33546 1638800 2.01 1672346 84 33353 1637204 2.00 1670557 85 32928 1640836 1.97 1673764 86 32726 1638872 1.96 1671598 87 32170 1626511 1.94 1658681 88 32473 1616092 1.97 1648565 89 32093 1610588 1.95 1642681 90 32785 1598001 2.01 1630786 91 32721 1599930 2.00 1632651 92 32977 1601715 2.02 1634692 93 32317 1594257 1.99 1626574 94 31527 1591194 1.94 1622721 95 31880 1594575 1.96 1626455 96 31251 1578612 1.94 1609863 97 30758 1570182 1.92 1600940 98 30880 1561812 1.94 1592692 99 30808 1552516 1.95 1583324 100 30843 1540663 1.96 1571506 101 30822 1536272 1.97 1567094 102 30844 1530698 1.98 1561542 103 30681 1528129 1.97 1558810 104 30259 1530810 1.94 1561069 105 30326 1519691 1.96 1550017 106 29840 1512489 1.93 1542329 107 29423 1497778 1.93 1527201 108 28668 1477248 1.90 1505916 109 28882 1470445 1.93 1499327 110 29439 1470824 1.96 1500263 111 28985 1460458 1.95 1489443 112 29389 1457662 1.98 1487051 113 29006 1451728 1.96 1480734 114 28468 1439461 1.94 1467929 115 28210 1428983 1.94 1457193 116 28211 1424623 1.94 1452834 117 27112 1408091 1.89 1435203 118 27228 1390533 1.92 1417761 119 27092 1380389 1.92 1407481 120 27454 1370442 1.96 1397896 121 27079 1361707 1.95 1388786 122 27019 1356025 1.95 1383044 123 26553 1340935 1.94 1367488 124 26239 1328838 1.94 1355077 125 25945 1313395 1.94 1339340 126 25355 1292029 1.92 1317384 127 25025 1279728 1.92 1304753 128 24739 1262903 1.92 1287642 129 24547 1245892 1.93 1270439 130 24198 1238143 1.92 1262341 131 24262 1230117 1.93 1254379 132 24433 1221628 1.96 1246061 133 23777 1205998 1.93 1229775 134 23584 1193181 1.94 1216765 135 23395 1175401 1.95 1198796 136 22902 1160803 1.93 1183705 137 22903 1145053 1.96 1167956 138 22237 1125375 1.94 1147612 139 21925 1111766 1.93 1133691 140 21628 1095523 1.94 1117151 141 22100 1079008 2.01 1101108 142 21397 1065434 1.97 1086831 143 20974 1051786 1.96 1072760 144 21052 1032341 2.00 1053393 145 20336 1019022 1.96 1039358 146 21388 1004291 2.09 1025679 147 22171 985794 2.20 1007965 148 22015 971650 2.22 993665 149 21596 951974 2.22 973570 150 20030 926050 2.12 946080 151 17709 874160 1.99 891869 CHH context (R1) ================ position count methylated count unmethylated % methylation coverage 1 34248 4935260 0.69 4969508 2 129961 6451837 1.97 6581798 3 158335 6550974 2.36 6709309 4 115174 5328123 2.12 5443297 5 106537 5170084 2.02 5276621 6 111884 5534355 1.98 5646239 7 122399 5719325 2.10 5841724 8 128794 5987343 2.11 6116137 9 129352 6040534 2.10 6169886 10 129715 6070660 2.09 6200375 11 137372 6238923 2.15 6376295 12 130403 6040903 2.11 6171306 13 130149 5947676 2.14 6077825 14 128886 5873741 2.15 6002627 15 127722 5763995 2.17 5891717 16 127931 5734456 2.18 5862387 17 129778 5753187 2.21 5882965 18 133282 5845770 2.23 5979052 19 137655 5930328 2.27 6067983 20 141187 6083442 2.27 6224629 21 141456 6142386 2.25 6283842 22 142554 6124300 2.27 6266854 23 139871 6131257 2.23 6271128 24 136909 6061736 2.21 6198645 25 133377 5912013 2.21 6045390 26 132677 5855620 2.22 5988297 27 134139 5893455 2.23 6027594 28 138639 5931637 2.28 6070276 29 141924 6086711 2.28 6228635 30 143979 6187375 2.27 6331354 31 146566 6258538 2.29 6405104 32 145257 6277408 2.26 6422665 33 142849 6234462 2.24 6377311 34 139117 6164905 2.21 6304022 35 136122 6102974 2.18 6239096 36 134327 6024921 2.18 6159248 37 135785 6004954 2.21 6140739 38 139388 6100029 2.23 6239417 39 141542 6162691 2.25 6304233 40 143460 6250375 2.24 6393835 41 144523 6343190 2.23 6487713 42 142422 6329609 2.20 6472031 43 142601 6304393 2.21 6446994 44 139069 6295671 2.16 6434740 45 135009 6196545 2.13 6331554 46 133799 6094104 2.15 6227903 47 134525 6092599 2.16 6227124 48 134656 6075604 2.17 6210260 49 137729 6128065 2.20 6265794 50 139539 6257677 2.18 6397216 51 140251 6270622 2.19 6410873 52 141277 6284680 2.20 6425957 53 140193 6320587 2.17 6460780 54 137055 6301219 2.13 6438274 55 136226 6260492 2.13 6396718 56 134451 6231985 2.11 6366436 57 133470 6169651 2.12 6303121 58 134882 6160242 2.14 6295124 59 136571 6184971 2.16 6321542 60 138130 6246692 2.16 6384822 61 140110 6338733 2.16 6478843 62 139347 6394477 2.13 6533824 63 137285 6357957 2.11 6495242 64 134837 6308306 2.09 6443143 65 132784 6288040 2.07 6420824 66 131617 6217924 2.07 6349541 67 131700 6219448 2.07 6351148 68 132087 6246033 2.07 6378120 69 131965 6202860 2.08 6334825 70 133849 6227946 2.10 6361795 71 135761 6329638 2.10 6465399 72 133994 6347210 2.07 6481204 73 134529 6328481 2.08 6463010 74 132508 6291265 2.06 6423773 75 129311 6204441 2.04 6333752 76 127533 6155814 2.03 6283347 77 127259 6137236 2.03 6264495 78 126796 6121183 2.03 6247979 79 129150 6137432 2.06 6266582 80 131491 6196893 2.08 6328384 81 132467 6205227 2.09 6337694 82 132432 6250955 2.07 6383387 83 131524 6276471 2.05 6407995 84 129506 6211208 2.04 6340714 85 126972 6147965 2.02 6274937 86 123568 6089161 1.99 6212729 87 121971 6008364 1.99 6130335 88 122345 5982897 2.00 6105242 89 124274 6018373 2.02 6142647 90 125982 6055661 2.04 6181643 91 128314 6131664 2.05 6259978 92 128015 6165562 2.03 6293577 93 125797 6139971 2.01 6265768 94 124896 6117282 2.00 6242178 95 123755 6054408 2.00 6178163 96 119601 5956016 1.97 6075617 97 118321 5889100 1.97 6007421 98 117610 5865914 1.97 5983524 99 118784 5845433 1.99 5964217 100 119737 5866102 2.00 5985839 101 121412 5917779 2.01 6039191 102 121134 5935981 2.00 6057115 103 120766 5920345 2.00 6041111 104 119858 5900926 1.99 6020784 105 117015 5825441 1.97 5942456 106 115499 5751564 1.97 5867063 107 113563 5675590 1.96 5789153 108 111304 5585559 1.95 5696863 109 111143 5548791 1.96 5659934 110 113166 5575793 1.99 5688959 111 113453 5590791 1.99 5704244 112 114428 5603398 2.00 5717826 113 113694 5611864 1.99 5725558 114 111654 5548900 1.97 5660554 115 110471 5494320 1.97 5604791 116 108499 5428291 1.96 5536790 117 106911 5340545 1.96 5447456 118 105942 5279804 1.97 5385746 119 105383 5250634 1.97 5356017 120 105371 5217702 1.98 5323073 121 105921 5227771 1.99 5333692 122 106207 5232705 1.99 5338912 123 104660 5190630 1.98 5295290 124 103134 5143841 1.97 5246975 125 101268 5079081 1.95 5180349 126 100282 5001470 1.97 5101752 127 98660 4931306 1.96 5029966 128 97144 4876492 1.95 4973636 129 96556 4814606 1.97 4911162 130 95411 4778026 1.96 4873437 131 95395 4759406 1.96 4854801 132 94960 4723060 1.97 4818020 133 93262 4671490 1.96 4764752 134 92481 4630986 1.96 4723467 135 91182 4558938 1.96 4650120 136 89426 4499498 1.95 4588924 137 88237 4436007 1.95 4524244 138 87649 4370447 1.97 4458096 139 86639 4311676 1.97 4398315 140 86162 4273885 1.98 4360047 141 85520 4207151 1.99 4292671 142 84091 4152640 1.98 4236731 143 83486 4108322 1.99 4191808 144 81851 4037921 1.99 4119772 145 81765 3975028 2.02 4056793 146 81737 3928026 2.04 4009763 147 82731 3872691 2.09 3955422 148 82918 3816112 2.13 3899030 149 81708 3747937 2.13 3829645 150 78620 3659142 2.10 3737762 151 67539 3477941 1.90 3545480 CpG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 9117 541082 1.66 550199 2 20582 498038 3.97 518620 3 40681 545726 6.94 586407 4 49330 604727 7.54 654057 5 51211 583877 8.06 635088 6 47692 567504 7.75 615196 7 49143 571075 7.92 620218 8 48537 550136 8.11 598673 9 52838 582476 8.32 635314 10 53704 544711 8.97 598415 11 53719 536431 9.10 590150 12 54986 527949 9.43 582935 13 51317 479485 9.67 530802 14 50700 472771 9.69 523471 15 49450 453913 9.82 503363 16 48650 435886 10.04 484536 17 48932 435088 10.11 484020 18 48594 429999 10.15 478593 19 48559 427565 10.20 476124 20 48150 421585 10.25 469735 21 47968 412654 10.41 460622 22 46896 400281 10.49 447177 23 45521 386565 10.54 432086 24 45330 377090 10.73 422420 25 43910 358674 10.91 402584 26 43199 346415 11.09 389614 27 42525 344132 11.00 386657 28 42208 343148 10.95 385356 29 41797 336932 11.04 378729 30 41514 334315 11.05 375829 31 40957 327025 11.13 367982 32 39605 319205 11.04 358810 33 39093 307189 11.29 346282 34 37869 297096 11.31 334965 35 37461 286390 11.57 323851 36 36842 280362 11.61 317204 37 36130 275797 11.58 311927 38 35598 273190 11.53 308788 39 35062 270609 11.47 305671 40 34752 266413 11.54 301165 41 34036 258993 11.62 293029 42 33594 255983 11.60 289577 43 32926 248522 11.70 281448 44 32431 241822 11.83 274253 45 31651 235044 11.87 266695 46 31246 226678 12.11 257924 47 30857 224163 12.10 255020 48 30437 221892 12.06 252329 49 29591 218258 11.94 247849 50 29352 216022 11.96 245374 51 29175 212557 12.07 241732 52 28361 206284 12.09 234645 53 28058 202239 12.18 230297 54 27771 198777 12.26 226548 55 27363 193343 12.40 220706 56 26933 188753 12.49 215686 57 26107 184789 12.38 210896 58 25869 181297 12.49 207166 59 25564 179889 12.44 205453 60 25088 177087 12.41 202175 61 24746 174998 12.39 199744 62 24863 171424 12.67 196287 63 24257 169171 12.54 193428 64 23440 164863 12.45 188303 65 23571 162477 12.67 186048 66 23161 158792 12.73 181953 67 22730 154261 12.84 176991 68 23006 153563 13.03 176569 69 22128 151014 12.78 173142 70 21514 148572 12.65 170086 71 21637 146135 12.90 167772 72 21420 144713 12.89 166133 73 21100 142164 12.92 163264 74 20830 140688 12.90 161518 75 20548 136863 13.05 157411 76 19832 132741 13.00 152573 77 19641 130859 13.05 150500 78 19508 129608 13.08 149116 79 19409 128179 13.15 147588 80 19035 127331 13.01 146366 81 18868 126548 12.98 145416 82 18386 123822 12.93 142208 83 18440 121942 13.14 140382 84 18066 119061 13.17 137127 85 17645 117344 13.07 134989 86 17534 114158 13.31 131692 87 17275 111770 13.39 129045 88 17055 109418 13.49 126473 89 16820 108892 13.38 125712 90 16502 109425 13.10 125927 91 16541 107619 13.32 124160 92 16297 106326 13.29 122623 93 16131 105387 13.27 121518 94 15733 102463 13.31 118196 95 15729 100731 13.51 116460 96 15564 98080 13.70 113644 97 15045 95732 13.58 110777 98 14932 94018 13.71 108950 99 14731 93544 13.61 108275 100 14307 92860 13.35 107167 101 14022 92037 13.22 106059 102 14054 91437 13.32 105491 103 13781 89189 13.38 102970 104 13777 88041 13.53 101818 105 13568 86543 13.55 100111 106 13422 84541 13.70 97963 107 12944 82055 13.63 94999 108 12777 81222 13.59 93999 109 12471 79370 13.58 91841 110 12473 78367 13.73 90840 111 12492 78579 13.72 91071 112 12205 77733 13.57 89938 113 12124 76912 13.62 89036 114 11699 75290 13.45 86989 115 11658 73623 13.67 85281 116 11641 72493 13.84 84134 117 11278 70750 13.75 82028 118 11112 70006 13.70 81118 119 10939 68647 13.74 79586 120 10755 68148 13.63 78903 121 10614 66937 13.69 77551 122 10514 66648 13.63 77162 123 10681 65945 13.94 76626 124 10267 65042 13.63 75309 125 10127 63575 13.74 73702 126 9872 62142 13.71 72014 127 9748 60833 13.81 70581 128 9458 60162 13.59 69620 129 9238 59082 13.52 68320 130 9390 57179 14.11 66569 131 9160 56813 13.88 65973 132 9013 56331 13.79 65344 133 8792 55128 13.75 63920 134 8716 54483 13.79 63199 135 8481 53631 13.65 62112 136 8369 52645 13.72 61014 137 8441 51929 13.98 60370 138 8285 51848 13.78 60133 139 8033 49751 13.90 57784 140 7882 49161 13.82 57043 141 7697 48578 13.68 56275 142 7627 48169 13.67 55796 143 7628 46782 14.02 54410 144 7440 46081 13.90 53521 145 7262 45032 13.89 52294 146 7168 44628 13.84 51796 147 6968 43630 13.77 50598 148 6792 42740 13.71 49532 149 6774 41510 14.03 48284 150 6419 36583 14.93 43002 151 5526 0 100.00 5526 CHG context (R2) ================ position count methylated count unmethylated % methylation coverage 1 15572 920629 1.66 936201 2 15013 698351 2.10 713364 3 21723 793649 2.66 815372 4 34891 781711 4.27 816602 5 20776 956788 2.13 977564 6 17724 855832 2.03 873556 7 16362 772206 2.07 788568 8 17438 764993 2.23 782431 9 16721 783690 2.09 800411 10 16464 761082 2.12 777546 11 15377 738042 2.04 753419 12 14862 713739 2.04 728601 13 14639 702289 2.04 716928 14 13675 680680 1.97 694355 15 13340 658789 1.98 672129 16 12931 640906 1.98 653837 17 12478 628729 1.95 641207 18 12712 616893 2.02 629605 19 12076 601129 1.97 613205 20 12089 591867 2.00 603956 21 11905 579698 2.01 591603 22 11622 564178 2.02 575800 23 11356 551987 2.02 563343 24 10735 545054 1.93 555789 25 10576 534525 1.94 545101 26 10262 523903 1.92 534165 27 9992 510417 1.92 520409 28 9781 503119 1.91 512900 29 9620 492311 1.92 501931 30 9246 478002 1.90 487248 31 9255 470517 1.93 479772 32 8929 457243 1.92 466172 33 8596 449154 1.88 457750 34 8478 440994 1.89 449472 35 8077 431991 1.84 440068 36 7976 424054 1.85 432030 37 7940 419188 1.86 427128 38 7674 410044 1.84 417718 39 7601 399383 1.87 406984 40 7298 389884 1.84 397182 41 7204 383087 1.85 390291 42 7058 372014 1.86 379072 43 6912 366871 1.85 373783 44 6562 361690 1.78 368252 45 6450 355545 1.78 361995 46 6384 351684 1.78 358068 47 6159 344051 1.76 350210 48 6204 337867 1.80 344071 49 5888 331947 1.74 337835 50 5943 322633 1.81 328576 51 5730 315232 1.79 320962 52 5623 308742 1.79 314365 53 5323 302441 1.73 307764 54 5268 297315 1.74 302583 55 5135 294731 1.71 299866 56 5210 292724 1.75 297934 57 4970 287670 1.70 292640 58 4787 282451 1.67 287238 59 4859 275311 1.73 280170 60 4689 268484 1.72 273173 61 4628 263742 1.72 268370 62 4469 257074 1.71 261543 63 4365 252835 1.70 257200 64 4213 251265 1.65 255478 65 4345 249312 1.71 253657 66 4206 245998 1.68 250204 67 4055 244109 1.63 248164 68 4110 239754 1.69 243864 69 3987 234683 1.67 238670 70 3908 229601 1.67 233509 71 3744 223113 1.65 226857 72 3781 219706 1.69 223487 73 3747 217260 1.70 221007 74 3588 213398 1.65 216986 75 3535 210131 1.65 213666 76 3299 209856 1.55 213155 77 3457 206790 1.64 210247 78 3312 205088 1.59 208400 79 3272 202146 1.59 205418 80 3221 197421 1.61 200642 81 3200 194308 1.62 197508 82 3207 191081 1.65 194288 83 3091 186831 1.63 189922 84 2905 182923 1.56 185828 85 2932 181956 1.59 184888 86 2828 178888 1.56 181716 87 2833 177993 1.57 180826 88 2834 175549 1.59 178383 89 2783 172667 1.59 175450 90 2728 168854 1.59 171582 91 2621 167115 1.54 169736 92 2627 163626 1.58 166253 93 2621 160453 1.61 163074 94 2552 159192 1.58 161744 95 2490 155977 1.57 158467 96 2461 154605 1.57 157066 97 2406 153279 1.55 155685 98 2403 149803 1.58 152206 99 2213 147285 1.48 149498 100 2277 146194 1.53 148471 101 2246 143162 1.54 145408 102 2219 140880 1.55 143099 103 2073 138764 1.47 140837 104 2093 135808 1.52 137901 105 2064 133714 1.52 135778 106 2023 131434 1.52 133457 107 2082 130639 1.57 132721 108 1930 129319 1.47 131249 109 1916 127307 1.48 129223 110 1774 124015 1.41 125789 111 1857 123100 1.49 124957 112 1827 121993 1.48 123820 113 1736 118553 1.44 120289 114 1790 117283 1.50 119073 115 1696 116312 1.44 118008 116 1681 113896 1.45 115577 117 1676 111801 1.48 113477 118 1624 110193 1.45 111817 119 1613 108853 1.46 110466 120 1629 107271 1.50 108900 121 1594 105669 1.49 107263 122 1602 103280 1.53 104882 123 1529 101315 1.49 102844 124 1525 100925 1.49 102450 125 1512 98314 1.51 99826 126 1367 97353 1.38 98720 127 1355 95635 1.40 96990 128 1425 93369 1.50 94794 129 1417 91961 1.52 93378 130 1264 90605 1.38 91869 131 1253 88349 1.40 89602 132 1294 87468 1.46 88762 133 1302 86442 1.48 87744 134 1244 84683 1.45 85927 135 1231 83320 1.46 84551 136 1216 82476 1.45 83692 137 1162 81094 1.41 82256 138 1151 80194 1.41 81345 139 1197 78626 1.50 79823 140 1091 76355 1.41 77446 141 1131 75355 1.48 76486 142 1126 73549 1.51 74675 143 1051 72891 1.42 73942 144 1038 71373 1.43 72411 145 1056 70083 1.48 71139 146 1017 68601 1.46 69618 147 1044 66991 1.53 68035 148 951 65765 1.43 66716 149 958 64127 1.47 65085 150 832 57921 1.42 58753 151 403 0 100.00 403 CHH context (R2) ================ position count methylated count unmethylated % methylation coverage 1 56954 3532503 1.59 3589457 2 68257 3161898 2.11 3230155 3 70666 3007564 2.30 3078230 4 73039 3007226 2.37 3080265 5 68339 3371429 1.99 3439768 6 71240 3542878 1.97 3614118 7 71555 3405478 2.06 3477033 8 69668 3222314 2.12 3291982 9 67763 3233295 2.05 3301058 10 64633 3048029 2.08 3112662 11 63155 2979351 2.08 3042506 12 59330 2808067 2.07 2867397 13 55767 2659953 2.05 2715720 14 55128 2644180 2.04 2699308 15 53090 2576657 2.02 2629747 16 51224 2521544 1.99 2572768 17 51742 2527215 2.01 2578957 18 51783 2499651 2.03 2551434 19 51857 2469071 2.06 2520928 20 50570 2423405 2.04 2473975 21 49454 2362889 2.05 2412343 22 47331 2266217 2.05 2313548 23 44942 2191157 2.01 2236099 24 43817 2135341 2.01 2179158 25 42328 2072139 2.00 2114467 26 41860 2046820 2.00 2088680 27 41744 2042572 2.00 2084316 28 41349 2017904 2.01 2059253 29 41332 1992403 2.03 2033735 30 40545 1947556 2.04 1988101 31 39375 1893339 2.04 1932714 32 37870 1833597 2.02 1871467 33 35948 1767353 1.99 1803301 34 34264 1708977 1.97 1743241 35 33518 1679423 1.96 1712941 36 32360 1653018 1.92 1685378 37 32373 1639812 1.94 1672185 38 32028 1627825 1.93 1659853 39 32017 1604501 1.96 1636518 40 31750 1571171 1.98 1602921 41 30740 1532050 1.97 1562790 42 30001 1488558 1.98 1518559 43 28381 1439510 1.93 1467891 44 27497 1403909 1.92 1431406 45 26386 1370437 1.89 1396823 46 25922 1342028 1.89 1367950 47 25358 1333139 1.87 1358497 48 25069 1317258 1.87 1342327 49 24654 1300060 1.86 1324714 50 24350 1288420 1.85 1312770 51 24257 1261915 1.89 1286172 52 23183 1226283 1.86 1249466 53 22869 1198592 1.87 1221461 54 22027 1167214 1.85 1189241 55 21338 1138527 1.84 1159865 56 20387 1121785 1.78 1142172 57 20314 1106963 1.80 1127277 58 19962 1093351 1.79 1113313 59 19583 1081099 1.78 1100682 60 19645 1065880 1.81 1085525 61 19636 1049729 1.84 1069365 62 19040 1025247 1.82 1044287 63 18286 997646 1.80 1015932 64 17555 974041 1.77 991596 65 17180 956402 1.76 973582 66 16578 940054 1.73 956632 67 16414 933457 1.73 949871 68 16161 925406 1.72 941567 69 16098 911379 1.74 927477 70 16011 896604 1.75 912615 71 15762 885757 1.75 901519 72 15417 871218 1.74 886635 73 14972 848571 1.73 863543 74 14580 831201 1.72 845781 75 14277 809511 1.73 823788 76 13741 796539 1.70 810280 77 13341 793425 1.65 806766 78 13393 786450 1.67 799843 79 13166 780280 1.66 793446 80 13331 770475 1.70 783806 81 13155 763467 1.69 776622 82 12991 749991 1.70 762982 83 12635 736785 1.69 749420 84 12224 715007 1.68 727231 85 11803 698472 1.66 710275 86 11479 686086 1.65 697565 87 11288 677738 1.64 689026 88 11072 671784 1.62 682856 89 11180 668914 1.64 680094 90 11247 665451 1.66 676698 91 11139 656141 1.67 667280 92 10726 644437 1.64 655163 93 10347 631170 1.61 641517 94 10333 615346 1.65 625679 95 9819 599549 1.61 609368 96 9576 588408 1.60 597984 97 9307 581124 1.58 590431 98 9270 575716 1.58 584986 99 9032 572587 1.55 581619 100 9060 567422 1.57 576482 101 9076 561438 1.59 570514 102 9019 552903 1.61 561922 103 8602 539820 1.57 548422 104 8457 529813 1.57 538270 105 8301 519505 1.57 527806 106 8195 508315 1.59 516510 107 7942 498222 1.57 506164 108 7793 493294 1.56 501087 109 7626 489827 1.53 497453 110 7713 488348 1.55 496061 111 7507 485277 1.52 492784 112 7467 476296 1.54 483763 113 7418 468694 1.56 476112 114 7123 458243 1.53 465366 115 7062 448191 1.55 455253 116 6896 439479 1.54 446375 117 6649 432668 1.51 439317 118 6560 426942 1.51 433502 119 6332 421736 1.48 428068 120 6422 417808 1.51 424230 121 6339 413423 1.51 419762 122 6309 407210 1.53 413519 123 6118 400199 1.51 406317 124 6089 391729 1.53 397818 125 5898 384074 1.51 389972 126 5842 377081 1.53 382923 127 5686 370481 1.51 376167 128 5629 364935 1.52 370564 129 5559 360354 1.52 365913 130 5465 356725 1.51 362190 131 5463 352570 1.53 358033 132 5265 346804 1.50 352069 133 5220 339286 1.52 344506 134 5116 336040 1.50 341156 135 5026 328306 1.51 333332 136 4817 323090 1.47 327907 137 4804 316454 1.50 321258 138 4658 311427 1.47 316085 139 4641 307715 1.49 312356 140 4533 302951 1.47 307484 141 4552 298712 1.50 303264 142 4485 293256 1.51 297741 143 4437 288788 1.51 293225 144 4303 282129 1.50 286432 145 4208 277265 1.49 281473 146 4245 271091 1.54 275336 147 4072 266486 1.51 270558 148 4119 261003 1.55 265122 149 3882 255912 1.49 259794 150 3635 232643 1.54 236278 151 1456 0 100.00 1456