ERR10684001.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 38429061 lines in total Total number of methylation call strings processed: 76858122 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1435026585 Total methylated C's in CpG context: 41112212 Total methylated C's in CHG context: 22838449 Total methylated C's in CHH context: 90261286 Total C to T conversions in CpG context: 160498943 Total C to T conversions in CHG context: 241137937 Total C to T conversions in CHH context: 879177758 C methylated in CpG context: 20.4% C methylated in non-CpG context: 9.2%