ERR10684000.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 36794777 lines in total Total number of methylation call strings processed: 73589554 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1199731256 Total methylated C's in CpG context: 31430103 Total methylated C's in CHG context: 16471876 Total methylated C's in CHH context: 63568118 Total C to T conversions in CpG context: 138955086 Total C to T conversions in CHG context: 207544275 Total C to T conversions in CHH context: 741761798 C methylated in CpG context: 18.4% C methylated in non-CpG context: 7.8%