ERR10683999.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 41810711 lines in total Total number of methylation call strings processed: 83621422 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1592014354 Total methylated C's in CpG context: 35554811 Total methylated C's in CHG context: 7950784 Total methylated C's in CHH context: 31024835 Total C to T conversions in CpG context: 182221667 Total C to T conversions in CHG context: 281931046 Total C to T conversions in CHH context: 1053331211 C methylated in CpG context: 16.3% C methylated in non-CpG context: 2.8%