ERR10683998.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 37939169 lines in total Total number of methylation call strings processed: 75878338 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1216780596 Total methylated C's in CpG context: 29466040 Total methylated C's in CHG context: 13045854 Total methylated C's in CHH context: 50089704 Total C to T conversions in CpG context: 141402282 Total C to T conversions in CHG context: 213064608 Total C to T conversions in CHH context: 769712108 C methylated in CpG context: 17.2% C methylated in non-CpG context: 6.0%