ERR10683997.dedup.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.24.2 Bismark result file: paired-end (SAM format) Output specified: comprehensive No overlapping methylation calls specified Methylation in CHG and CHH context will be merged into "non-CpG context" output Processed 44703103 lines in total Total number of methylation call strings processed: 89406206 Final Cytosine Methylation Report ================================= Total number of C's analysed: 1727828337 Total methylated C's in CpG context: 35780226 Total methylated C's in CHG context: 2981666 Total methylated C's in CHH context: 10719716 Total C to T conversions in CpG context: 199661424 Total C to T conversions in CHG context: 310372352 Total C to T conversions in CHH context: 1168312953 C methylated in CpG context: 15.2% C methylated in non-CpG context: 0.9%