FastQCFastQC Report
Mon 21 Apr 2025
SRR19635631_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR19635631_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23021755
Total Bases3.4 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACGATGTTATATGGGTAACTGCCGCGAATGATGTTTTTTTTTTTTTTT456510.1982950474453403No Hit
CTTTCTTCCCCTTTTTCCTTGTTTGGCCACTTCCTGTGTTGGGAAAGGAT255230.11086470167022454No Hit
CTCAAATCCTCTTAACCCGAAAATTTTTGATACTAGATCCAACCTCTTTT254800.11067792181786314No Hit
CGATGTTATATGGGTAACTGCCGCGAATGATGTTTTTTTTTTTTTTTTTT252730.10977877229603043No Hit
CTTTGCACCTGTTTTTCAAAAGACACAAAATTACTGCAAATCGAATAATA244660.10627339227613188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)