Sample Filename File type Encoding Total Sequences Total Bases Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content PSC-0517_R1_001 PSC-0517_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30401012.0 4.5 Gbp 0.0 150.0 44.0 44.88755395537656 150.0 pass pass warn pass fail warn pass pass fail warn warn PSC-0517_R2_001 PSC-0517_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30401012.0 4.5 Gbp 0.0 150.0 44.0 45.224490104122964 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0518_R1_001 PSC-0518_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32341773.0 4.8 Gbp 0.0 150.0 43.0 40.86959902338182 150.0 pass pass warn pass fail warn pass pass fail pass pass PSC-0518_R2_001 PSC-0518_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 32341773.0 4.8 Gbp 0.0 150.0 43.0 41.47708079184647 150.0 pass pass fail pass fail fail pass pass fail fail warn PSC-0519_R1_001 PSC-0519_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29104089.0 4.3 Gbp 0.0 150.0 43.0 43.16154097500389 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0519_R2_001 PSC-0519_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29104089.0 4.3 Gbp 0.0 150.0 43.0 43.238868676840355 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0523_R1_001 PSC-0523_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 26463044.0 3.9 Gbp 0.0 150.0 44.0 44.1719366313229 150.0 pass pass warn pass fail warn pass pass fail warn warn PSC-0523_R2_001 PSC-0523_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 26463044.0 3.9 Gbp 0.0 150.0 45.0 45.04863839696939 150.0 pass pass fail pass fail warn pass pass fail warn warn PSC-0524_R1_001 PSC-0524_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29643603.0 4.4 Gbp 0.0 150.0 41.0 40.593148532146586 150.0 pass pass warn pass fail warn pass pass fail pass warn PSC-0524_R2_001 PSC-0524_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29643603.0 4.4 Gbp 0.0 150.0 41.0 40.61637970669929 150.0 pass pass fail pass fail warn pass pass fail warn warn PSC-0525_R1_001 PSC-0525_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34262449.0 5.1 Gbp 0.0 150.0 43.0 39.58226551565086 150.0 pass pass warn pass fail warn pass pass fail pass warn PSC-0525_R2_001 PSC-0525_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34262449.0 5.1 Gbp 0.0 150.0 43.0 40.18829634364142 150.0 pass pass fail pass fail warn pass pass fail warn warn PSC-0529_R1_001 PSC-0529_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 28310051.0 4.2 Gbp 0.0 150.0 44.0 42.190743940655224 150.0 pass pass warn pass fail warn pass pass fail warn warn PSC-0529_R2_001 PSC-0529_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 28310051.0 4.2 Gbp 0.0 150.0 45.0 42.81115724919567 150.0 pass pass fail pass fail warn pass pass fail warn warn PSC-0530_R1_001 PSC-0530_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30790327.0 4.6 Gbp 0.0 150.0 42.0 47.30244603949797 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0530_R2_001 PSC-0530_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30790327.0 4.6 Gbp 0.0 150.0 43.0 47.889784089606216 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0531_R1_001 PSC-0531_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 28888678.0 4.3 Gbp 0.0 150.0 42.0 40.85386065365736 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0531_R2_001 PSC-0531_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 28888678.0 4.3 Gbp 0.0 150.0 42.0 41.37529054436659 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0535_R1_001 PSC-0535_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35982788.0 5.3 Gbp 0.0 150.0 45.0 41.67532243598023 150.0 pass pass warn pass fail warn pass pass fail warn warn PSC-0535_R2_001 PSC-0535_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 35982788.0 5.3 Gbp 0.0 150.0 46.0 42.25457281594642 150.0 pass pass fail pass fail fail pass pass fail warn warn PSC-0536_R1_001 PSC-0536_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33783490.0 5 Gbp 0.0 150.0 42.0 35.525690985990295 150.0 pass pass warn pass fail fail pass pass fail pass warn PSC-0536_R2_001 PSC-0536_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33783490.0 5 Gbp 0.0 150.0 43.0 36.38456315244839 150.0 pass pass fail pass fail fail pass pass fail warn warn PSC-0537_R1_001 PSC-0537_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33198500.0 4.9 Gbp 0.0 150.0 42.0 38.96842473365325 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0537_R2_001 PSC-0537_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 33198500.0 4.9 Gbp 0.0 150.0 42.0 39.34082116074154 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0547_R1_001 PSC-0547_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34103028.0 5.1 Gbp 0.0 150.0 45.0 42.12593852543259 150.0 pass pass warn pass fail fail pass pass fail warn warn PSC-0547_R2_001 PSC-0547_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 34103028.0 5.1 Gbp 0.0 150.0 45.0 42.515430129393145 150.0 pass pass fail pass fail fail pass pass fail warn warn PSC-0548_R1_001 PSC-0548_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29624515.0 4.4 Gbp 0.0 150.0 43.0 37.7688461280703 150.0 pass pass warn pass fail fail pass pass fail pass warn PSC-0548_R2_001 PSC-0548_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29624515.0 4.4 Gbp 0.0 150.0 44.0 38.759389809049544 150.0 pass pass fail pass fail fail pass pass fail warn warn PSC-0549_R1_001 PSC-0549_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29189860.0 4.3 Gbp 0.0 150.0 43.0 40.35569457213613 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0549_R2_001 PSC-0549_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 29189860.0 4.3 Gbp 0.0 150.0 43.0 40.761321879616425 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0559_R1_001 PSC-0559_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 26344609.0 3.9 Gbp 0.0 150.0 44.0 44.71627281831796 150.0 pass pass warn pass fail warn pass pass fail warn pass PSC-0559_R2_001 PSC-0559_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 26344609.0 3.9 Gbp 0.0 150.0 45.0 45.965615147211906 150.0 pass pass fail pass fail warn pass pass fail fail pass PSC-0560_R1_001 PSC-0560_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30997915.0 4.6 Gbp 0.0 150.0 42.0 41.114276309585264 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0560_R2_001 PSC-0560_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 30997915.0 4.6 Gbp 0.0 150.0 43.0 42.4113041170319 150.0 pass pass fail pass fail pass pass pass fail warn warn PSC-0561_R1_001 PSC-0561_R1_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31125029.0 4.6 Gbp 0.0 150.0 42.0 39.53069000752305 150.0 pass pass warn pass fail pass pass pass fail pass warn PSC-0561_R2_001 PSC-0561_R2_001.fastq.gz Conventional base calls Sanger / Illumina 1.9 31125029.0 4.6 Gbp 0.0 150.0 43.0 39.920938650143526 150.0 pass pass fail pass fail pass pass pass fail warn warn