Index of /v1_web/owlshell/bu-raven_8TB_HDD_02/graceac9/GitHub/paper-pycno-sswd-2021-2022/code

	Name	Last modified	Size	Description
	Parent Directory		-
	01-FastQC_pre-trim.Rmd	2024-10-30 13:35	2.0K
	02-20220810_pycno_fa..>	2024-10-30 13:35	4.5K
	03-hisat2-summer_202..>	2024-10-30 13:35	29K
	03-kallisto-summer21..>	2024-10-30 13:35	3.5K
	04-PCAplots.Rmd	2024-10-30 13:35	12K
	05-deseq2.Rmd	2024-10-30 13:35	18K
	06-BLAST.Rmd	2024-10-30 13:35	3.1K
	07-BLAST_annot-SP_GO..>	2024-10-30 13:35	15K
	08-deglist_annot.Rmd	2024-10-30 13:35	5.0K
	09-DAVID_lists.Rmd	2024-10-30 13:35	2.7K
	10-hisat-deseq2.Rmd	2024-10-30 13:35	11K
	11-kallisto.qmd	2024-10-30 13:35	3.0K
	12-fix-gff.qmd	2024-10-30 13:35	2.0K
	13-hisat-deseq2.Rmd	2024-10-30 13:35	6.2K
	13-hisat-deseq2.html	2024-10-30 13:35	905K
	14-blast.Rmd	2024-10-30 13:35	5.2K
	15-genome_blast_anno..>	2024-10-30 13:35	2.5K
	15-hisat2-deseq2-sum..>	2024-10-30 13:35	27K
	16-blast-genome-anno..>	2024-10-30 13:35	3.6K
	17-kallisto-2021-202..>	2024-10-30 13:35	4.2K
	18-deseq2_2021_2022.Rmd	2024-10-30 13:35	17K
	19-get-gene-annotati..>	2024-10-30 13:35	540
	20-hisat2-genecount-..>	2024-10-30 13:35	8.5K
	21-deseq2-2021.Rmd	2024-10-30 13:35	5.1K
	22-deseq2-2022.Rmd	2024-10-30 13:35	9.9K
	23-annotating-deg-li..>	2024-11-18 09:47	6.3K
	24-2021-2022-enrichm..>	2024-10-30 13:35	1.2K
	25-compare-2021-2022..>	2024-10-30 17:38	6.3K
	26-visualizations.Rmd	2025-02-03 14:01	19K
	27-heatmaps.Rmd	2025-04-22 13:04	8.4K
	readme.md	2024-10-30 13:35	133