FreeADFun Free memory allocated on the C++ side by 'MakeADFun'. GK Gauss Kronrod configuration MakeADFun Construct objective functions with derivatives based on a compiled C++ template. Rinterface Create minimal R-code corresponding to a cpp template. SR Sequential reduction configuration as.list.sdreport Convert estimates to original list format. benchmark Benchmark parallel templates checkConsistency Check consistency and Laplace accuracy compile Compile a C++ template to DLL suitable for MakeADFun. config Get or set internal configuration variables confint.tmbprofile Profile based confidence intervals. dynlib Add dynlib extension gdbsource Source R-script through gdb to get backtrace. newton Generalized newton optimizer. newtonOption Set newton options for a model object. normalize Normalize process likelihood using the Laplace approximation. oneStepPredict Calculate one-step-ahead (OSA) residuals for a latent variable model. openmp Control number of OpenMP threads used by a TMB model. plot.tmbprofile Plot likelihood profile. precompile Precompile the TMB library in order to speed up compilation of templates. print.checkConsistency Print output from 'checkConsistency' print.sdreport Print brief model summary runExample Run one of the test examples. runSymbolicAnalysis Run symbolic analysis on sparse Hessian sdreport General sdreport function. summary.checkConsistency Summarize output from 'checkConsistency' summary.sdreport summary tables of model parameters template Create cpp template to get started. tmbprofile Adaptive likelihood profiling. tmbroot Compute likelihood profile confidence intervals of a TMB object by root-finding