ALASCA Create an ALASCA model AlascaModel R6 Class Representing an ALASCA model AlascaPlot R6 Class that helps visualizing an ALASCA model build_model Organize the ALASCA model construction clean_alasca Clean the ALASCA data clean_pca Clean the PCA data do_pca Perform PCA do_reduce_dimensions Perform PCA for Limm-PCA do_validate Validate the ALASCA model LMM find_missing_predictor_variables Check if predictor variables are missing find_missing_response_variables Check if response variables are missing flip Flip an ALASCA object flip.AlascaModel Flip an ALASCA object get_bootstrap_data Make bootstrap data set get_covars Get coefficients for covariates get_covars.AlascaModel Get coefficients for covariates get_default_scaling_function Get a scaling function get_effect_matrix Get effect matrix get_loadings Returns model scores get_loadings.AlascaModel Returns model loadings get_pca_function Summary get_predictions Get coefficients for covariates get_predictions.AlascaModel Returns model predictions get_regression_coefficients Get regression coefficients get_regression_formula Modify formula get_regression_predictions Validate underlying regression models get_scaling_function Get a scaling function get_scores Returns model scores get_scores.AlascaModel Returns model scores get_validation_percentiles Extract percentiles get_validation_percentiles_covars Extract percentiles for covariates get_validation_percentiles_loading Extract percentiles for loading get_validation_percentiles_regression Extract percentiles for regressions get_validation_percentiles_score Extract percentiles for scores plot_covar Plot covariate coefficients plot_covariate Plot covariate coefficients plot_covariates Plot covariate coefficients plot_mm Plot marginal means plot_val Plot covariate coefficients prepare_validation_run Make a single validation run remove_covars Remove unwanted covariables remove_embedded_data Remove df from object residuals.AlascaModel Prints a marco object run_regression Run regressions save.AlascaModel Save ALASCA model screeplot Get screeplot screeplot.AlascaModel Get screeplot set_method Determine whether to use LM or LMM summary.AlascaModel Summary