INFO  [2024-03-07 16:32:38] Initializing ALASCA (v1.0.15, 2024-02-07)
WARN  [2024-03-07 16:32:38] Guessing effects: `fold+fold:treatment+treatment`
INFO  [2024-03-07 16:32:38] Will use linear mixed models!
INFO  [2024-03-07 16:32:38] Will use Rfast!
WARN  [2024-03-07 16:32:38] Converting IDs to integer values
WARN  [2024-03-07 16:32:38] The `fold` column is used for stratification
WARN  [2024-03-07 16:32:39] Converting `character` columns to factors
INFO  [2024-03-07 16:32:39] Scaling data with sdall ...
INFO  [2024-03-07 16:32:39] Calculating LMM coefficients
INFO  [2024-03-07 16:32:39] Reducing the number of dimensions with PCA
INFO  [2024-03-07 16:32:40] Keeping 46 components from initial PCA, explaining 95.24 % of variation. The limit can be changed with `reduce_dimensions.limit`
INFO  [2024-03-07 16:32:41] -> Finished the reduction of dimensions!
WARN  [2024-03-07 16:32:41] Keeping 20 of 46 components. Change `max_PC` if necessary.
INFO  [2024-03-07 16:32:42] Starting validation: bootstrap
INFO  [2024-03-07 16:32:42] - Run 1 of 10
INFO  [2024-03-07 16:32:46] --- Used 4.55 seconds. Est. time remaining: 41.11 seconds
INFO  [2024-03-07 16:32:46] - Run 2 of 10
INFO  [2024-03-07 16:32:51] --- Used 4.5 seconds. Est. time remaining: 36.27 seconds
INFO  [2024-03-07 16:32:51] - Run 3 of 10
INFO  [2024-03-07 16:32:55] --- Used 4.35 seconds. Est. time remaining: 31.31 seconds
INFO  [2024-03-07 16:32:55] - Run 4 of 10
INFO  [2024-03-07 16:32:59] --- Used 4.39 seconds. Est. time remaining: 26.71 seconds
INFO  [2024-03-07 16:32:59] - Run 5 of 10
INFO  [2024-03-07 16:33:04] --- Used 4.55 seconds. Est. time remaining: 22.36 seconds
INFO  [2024-03-07 16:33:04] - Run 6 of 10
INFO  [2024-03-07 16:33:08] --- Used 4.49 seconds. Est. time remaining: 17.9 seconds
INFO  [2024-03-07 16:33:08] - Run 7 of 10
INFO  [2024-03-07 16:33:13] --- Used 4.48 seconds. Est. time remaining: 13.42 seconds
INFO  [2024-03-07 16:33:13] - Run 8 of 10
INFO  [2024-03-07 16:33:17] --- Used 4.45 seconds. Est. time remaining: 8.94 seconds
INFO  [2024-03-07 16:33:17] - Run 9 of 10
INFO  [2024-03-07 16:33:22] --- Used 4.54 seconds. Est. time remaining: 4.48 seconds
INFO  [2024-03-07 16:33:22] - Run 10 of 10
INFO  [2024-03-07 16:33:26] --- Used 4.39 seconds. Est. time remaining: 0 seconds
INFO  [2024-03-07 16:33:26] Calculating percentiles for score and loading
INFO  [2024-03-07 16:33:46] ==== ALASCA has finished ====
INFO  [2024-03-07 16:33:46] To visualize the model, try `plot(<object>, effect = 1, component = 1, type = 'effect')`