INFO  [2024-03-07 16:17:58] Initializing ALASCA (v1.0.15, 2024-02-07)
WARN  [2024-03-07 16:17:58] Guessing effects: `fold+fold:treatment+treatment`
INFO  [2024-03-07 16:17:58] Will use linear mixed models!
INFO  [2024-03-07 16:17:58] Will use Rfast!
WARN  [2024-03-07 16:17:58] Converting IDs to integer values
WARN  [2024-03-07 16:17:58] The `fold` column is used for stratification
WARN  [2024-03-07 16:17:58] Converting `character` columns to factors
INFO  [2024-03-07 16:17:58] Scaling data with sdall ...
INFO  [2024-03-07 16:17:59] Calculating LMM coefficients
WARN  [2024-03-07 16:18:03] Keeping 20 of 80 components. Change `max_PC` if necessary.
INFO  [2024-03-07 16:18:07] Starting validation: bootstrap
INFO  [2024-03-07 16:18:07] - Run 1 of 10
INFO  [2024-03-07 16:18:40] --- Used 33.02 seconds. Est. time remaining: 297.42 seconds
INFO  [2024-03-07 16:18:40] - Run 2 of 10
INFO  [2024-03-07 16:19:10] --- Used 29.88 seconds. Est. time remaining: 251.74 seconds
INFO  [2024-03-07 16:19:10] - Run 3 of 10
INFO  [2024-03-07 16:19:39] --- Used 28.63 seconds. Est. time remaining: 213.65 seconds
INFO  [2024-03-07 16:19:39] - Run 4 of 10
INFO  [2024-03-07 16:20:06] --- Used 27.12 seconds. Est. time remaining: 178.03 seconds
INFO  [2024-03-07 16:20:06] - Run 5 of 10
INFO  [2024-03-07 16:20:35] --- Used 28.72 seconds. Est. time remaining: 147.41 seconds
INFO  [2024-03-07 16:20:35] - Run 6 of 10
INFO  [2024-03-07 16:21:04] --- Used 29.46 seconds. Est. time remaining: 117.91 seconds
INFO  [2024-03-07 16:21:04] - Run 7 of 10
INFO  [2024-03-07 16:21:32] --- Used 27.54 seconds. Est. time remaining: 87.6 seconds
INFO  [2024-03-07 16:21:32] - Run 8 of 10
INFO  [2024-03-07 16:22:01] --- Used 28.86 seconds. Est. time remaining: 58.32 seconds
INFO  [2024-03-07 16:22:01] - Run 9 of 10
INFO  [2024-03-07 16:22:29] --- Used 28.76 seconds. Est. time remaining: 29.11 seconds
INFO  [2024-03-07 16:22:29] - Run 10 of 10
INFO  [2024-03-07 16:22:59] --- Used 29.27 seconds. Est. time remaining: 0 seconds
INFO  [2024-03-07 16:22:59] Calculating percentiles for score and loading
INFO  [2024-03-07 16:23:19] ==== ALASCA has finished ====
INFO  [2024-03-07 16:23:19] To visualize the model, try `plot(<object>, effect = 1, component = 1, type = 'effect')`
INFO  [2024-03-07 16:23:24] Scree plot. Selected effect (nr 1): `fold+fold:treatment+treatment`. Component: 1 and 2 and 3 and 4 and 5 and 6 and 7 and 8 and 9 and 10.
INFO  [2024-03-07 16:23:33] Effect plot. Selected effect (nr 1): `fold+fold:treatment+treatment`. Component: 1.
WARN  [2024-03-07 16:23:33] Showing 20 of 11270 variables. Adjust the number with `n_limit`