Status	../output/31.5-Apul-lncRNA-discovery/ACR-139-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-139-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-139-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-139-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-145-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-145-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-145-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-145-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-150-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-150-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-150-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-150-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-173-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-173-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-173-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-173-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-186-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-186-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-186-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-186-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-225-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-225-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-225-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-225-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-229-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-229-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-229-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-229-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-237-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-237-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-237-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-237-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-244-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-244-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-244-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-244-TP4.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-265-TP1.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-265-TP2.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-265-TP3.sorted.bam	../output/31.5-Apul-lncRNA-discovery/ACR-265-TP4.sorted.bam
Assigned	4393769	4587184	4269554	4608624	5149448	4336194	5975570	5098924	5077881	4653670	4465924	5654187	4572987	3724953	5107364	3840348	2461481	4353053	4212191	4172247	3971187	5848668	4713377	3546569	5295232	5045403	4216362	4777645	5846199	4521186	4749139	6799138	2926714	6113012	5847473	6253990	6707118	6150606	5825419	5601119
Unassigned_Unmapped	8870419	10542122	7835882	9967895	10726912	13920461	12054987	12536749	15275296	8213567	7868719	8715483	10309973	9184590	9803769	9675936	14001192	8594688	8281796	7706441	7918911	9816277	9748415	8416284	8570167	8490416	7452400	13982887	10217647	10128171	7086528	11390922	20078565	12055214	10454772	12502791	16239855	9898326	10852221	12995542
Unassigned_Read_Type	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_Singleton	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_MappingQuality	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_Chimera	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_FragmentLength	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_Duplicate	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_MultiMapping	6526456	5668681	6182642	7517544	15172546	4894572	7135619	7489254	10120434	7229345	6633361	5709339	12586657	6154435	6406661	6649869	3798912	5795459	4043529	6525686	6806811	7549703	7654404	5691955	8168634	5456907	5767387	8579222	6437375	4738987	5414678	8978682	3163111	6107088	9182152	6562355	13740332	6890194	10162776	7568017
Unassigned_Secondary	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_NonSplit	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_NoFeatures	20720406	22105505	22445156	24324499	24837095	16069829	26626250	23633623	23700138	22288132	21529944	26517353	19517464	17917312	25207518	19619782	15820674	20084263	19003748	23488642	19888333	21442379	24844280	18793559	27577375	22811771	21211702	24681861	26767604	17626916	22265856	27634518	15182084	23810642	26322181	23739861	33151863	24969587	23724343	27518641
Unassigned_Overlapping_Length	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Unassigned_Ambiguity	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0