method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	0	1307	638	669	0	1303	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	10	992	483	509	0	992	TRUE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	15	982	479	503	0	982	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	25	921	455	466	0	921	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	0	1051	509	542	0	1049	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	10	942	456	486	0	942	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	15	942	456	486	0	942	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	25	901	442	459	0	901	FALSE