method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	0	584	311	273	0	576	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	10	388	214	174	0	383	TRUE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	15	262	156	106	0	259	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	25	7	3	4	0	6	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	0	259	132	127	0	259	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	10	214	116	98	0	214	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	15	149	89	60	0	149	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	25	2	2	0	0	2	FALSE