method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	0	181	93	88	0	177	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	10	68	37	31	0	67	TRUE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	15	16	10	6	0	15	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.05	25	3	1	2	0	2	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	0	38	23	15	0	38	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	10	22	15	7	0	22	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	15	3	3	0	0	3	FALSE
methylKit	tile1000	3	10	99.9	All	MN	0	observed	ploidy	All	424348	18	0.01	25	1	1	0	0	1	FALSE