method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	0	326	166	160	0	326	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	10	301	153	148	0	301	TRUE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	15	300	153	147	0	300	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	25	294	149	145	0	294	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	0	304	156	148	0	304	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	10	299	152	147	0	299	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	15	299	152	147	0	299	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	25	294	149	145	0	294	FALSE