method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	0	321	154	167	0	318	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	10	296	141	155	0	296	TRUE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	15	293	140	153	0	293	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	25	3	2	1	0	3	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	0	296	144	152	0	296	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	10	291	140	151	0	291	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	15	289	139	150	0	289	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	25	3	2	1	0	3	FALSE