method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	0	320	164	156	0	317	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	10	296	152	144	0	296	TRUE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	15	295	152	143	0	295	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	25	2	1	1	0	2	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	0	293	152	141	0	293	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	10	288	148	140	0	288	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	15	288	148	140	0	288	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	25	2	1	1	0	2	FALSE