method	regions	cov.bases	lo.count	hi.perc	samples	overdispersion	perm	perm.scheme	test	min.per.group	regions.tested	regions.tested.mito	qvalue	difference	DMR	hypermethylated	hypomethylated	DMR.mito	DMR.BH	primary
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	0	219	114	105	0	219	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	10	117	76	41	0	117	TRUE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	15	3	2	1	0	3	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.05	25	0	0	0	0	0	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	0	176	97	79	0	176	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	10	99	69	30	0	99	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	15	2	1	1	0	2	FALSE
methylKit	gene	3	10	99.9	All	MN	0	observed	ploidy	All	34058	0	0.01	25	0	0	0	0	0	FALSE