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"CTCAG":374015, "CTCTA":125137, "CTCTT":616929, "CTCTC":828202, "CTCTG":33984, "CTCCA":1887221, "CTCCT":618145, "CTCCC":978045, "CTCCG":14603, "CTCGA":20763, "CTCGT":24955, "CTCGC":7816, "CTCGG":15190, "CTGAA":1765897, "CTGAT":93327, "CTGAC":23059, "CTGAG":48518, "CTGTA":104248, "CTGTT":184407, "CTGTC":32926, "CTGTG":65760, "CTGCA":17818, "CTGCT":39822, "CTGCC":15873, "CTGCG":6351, "CTGGA":63518, "CTGGT":231443, "CTGGC":11779, "CTGGG":578003, "CCAAA":107508, "CCAAT":48859, "CCAAC":53157, "CCAAG":26860, "CCATA":1220755, "CCATT":62617, "CCATC":1038274, "CCATG":27143, "CCACA":34308, "CCACT":48618, "CCACC":52893, "CCACG":14471, "CCAGA":1900639, "CCAGT":1379120, "CCAGC":17346, "CCAGG":19150, "CCTAA":40240, "CCTAT":37702, "CCTAC":26985, "CCTAG":282630, "CCTTA":76763, "CCTTT":407717, "CCTTC":496591, "CCTTG":30748, "CCTCA":274750, "CCTCT":579525, "CCTCC":833915, "CCTCG":10521, "CCTGA":25973, "CCTGT":28003, "CCTGC":12882, "CCTGG":16964, "CCCAA":87668, "CCCAT":60548, "CCCAC":53143, "CCCAG":1407261, "CCCTA":219700, "CCCTT":320255, "CCCTC":601911, "CCCTG":18719, "CCCCA":893357, "CCCCT":384511, "CCCCC":679515, "CCCCG":15714, "CCCGA":16887, "CCCGT":16582, "CCCGC":7823, "CCCGG":7044, "CCGAA":21498, "CCGAT":113746, "CCGAC":8223, "CCGAG":12752, "CCGTA":13573, "CCGTT":40768, "CCGTC":47876, "CCGTG":11177, "CCGCA":8076, "CCGCT":8721, "CCGCC":8713, "CCGCG":3962, "CCGGA":13491, "CCGGT":13329, "CCGGC":6974, "CCGGG":8707, "CGAAA":959332, "CGAAT":908792, "CGAAC":55809, "CGAAG":430282, "CGATA":1188721, "CGATT":1394852, "CGATC":213570, "CGATG":507053, "CGACA":10479, "CGACT":14254, "CGACC":9285, "CGACG":179341, "CGAGA":578845, "CGAGT":643743, "CGAGC":38449, "CGAGG":290826, "CGTAA":1059227, "CGTAT":1380581, "CGTAC":101999, "CGTAG":491195, "CGTTA":1495952, "CGTTT":2253653, "CGTTC":160253, "CGTTG":586969, "CGTCA":27049, "CGTCT":1972182, "CGTCC":27266, "CGTCG":255233, "CGTGA":460330, "CGTGT":806772, "CGTGC":41726, "CGTGG":269887, "CGCAA":10411, "CGCAT":11609, "CGCAC":7965, "CGCAG":8886, "CGCTA":9438, "CGCTT":20770, "CGCTC":14788, "CGCTG":8454, "CGCCA":7819, "CGCCT":11246, "CGCCC":10472, "CGCCG":4310, "CGCGA":143844, "CGCGT":194159, "CGCGC":23926, "CGCGG":100385, "CGGAA":3167238, "CGGAT":746356, "CGGAC":83853, "CGGAG":299685, "CGGTA":631443, "CGGTT":936566, "CGGTC":82195, "CGGTG":336487, "CGGCA":7806, "CGGCT":39063, "CGGCC":7582, "CGGCG":100650, "CGGGA":291423, "CGGGT":443393, "CGGGC":36754, "CGGGG":278271, "GAAAA":22906283, "GAAAT":24339424, "GAAAC":259194, "GAAAG":8876960, "GAATA":17193797, "GAATT":22278013, "GAATC":332461, "GAATG":8565045, "GAACA":73084, "GAACT":1667449, "GAACC":46693, "GAACG":362163, "GAAGA":10801688, "GAAGT":9205476, "GAAGC":124025, "GAAGG":3827552, "GATAA":17780938, "GATAT":25893753, "GATAC":270970, "GATAG":9715748, "GATTA":18212630, "GATTT":31844305, "GATTC":535684, "GATTG":11143204, "GATCA":87680, "GATCT":284243, "GATCC":151351, "GATCG":3474719, "GATGA":8994606, "GATGT":12912169, "GATGC":121229, "GATGG":4775474, "GACAA":63484, "GACAT":75538, "GACAC":15631, "GACAG":37780, "GACTA":48515, "GACTT":106645, "GACTC":47365, "GACTG":32632, "GACCA":17932, "GACCT":34895, "GACCC":43454, "GACCG":7873, "GACGA":462949, "GACGT":685404, "GACGC":31441, "GACGG":357576, "GAGAA":8341906, "GAGAT":8867165, "GAGAC":123549, "GAGAG":10643975, "GAGTA":7154795, "GAGTT":10089287, "GAGTC":159373, "GAGTG":5486425, "GAGCA":2281698, "GAGCT":44334, "GAGCC":30401, "GAGCG":242075, "GAGGA":4304795, "GAGGT":4781351, "GAGGC":74583, "GAGGG":2753493, "GTAAA":20700791, "GTAAT":21002039, "GTAAC":237543, "GTAAG":7794600, "GTATA":26401553, "GTATT":31758364, "GTATC":472869, "GTATG":12913083, "GTACA":84819, "GTACT":89563, "GTACC":30463, "GTACG":644689, "GTAGA":9462581, "GTAGT":11076276, "GTAGC":129476, "GTAGG":4881601, "GTTAA":20677039, "GTTAT":30758070, "GTTAC":366039, "GTTAG":10464329, "GTTTA":28812965, "GTTTT":50611301, "GTTTC":846365, "GTTTG":17953501, "GTTCA":162231, "GTTCT":320447, "GTTCC":174199, "GTTCG":976749, "GTTGA":12091329, "GTTGT":16707957, "GTTGC":169731, "GTTGG":6103584, "GTCAA":121091, "GTCAT":149176, "GTCAC":1294129, "GTCAG":60037, "GTCTA":112935, "GTCTT":392552, "GTCTC":163058, "GTCTG":1829286, "GTCCA":24296, "GTCCT":149391, "GTCCC":179031, "GTCCG":11754, "GTCGA":647630, "GTCGT":930004, "GTCGC":49373, "GTCGG":497290, "GTGAA":10027299, "GTGAT":12808040, "GTGAC":187291, "GTGAG":4598345, "GTGTA":13961489, "GTGTT":17409877, "GTGTC":348956, "GTGTG":9716908, "GTGCA":46770, "GTGCT":62187, "GTGCC":43602, "GTGCG":261274, "GTGGA":4940943, "GTGGT":6755153, "GTGGC":188298, "GTGGG":3206607, "GCAAA":78445, "GCAAT":74881, "GCAAC":15968, "GCAAG":31976, "GCATA":74550, "GCATT":105967, "GCATC":17764, "GCATG":44670, "GCACA":2130395, "GCACT":15787, "GCACC":18676, "GCACG":7377, "GCAGA":42541, "GCAGT":48583, "GCAGC":10871, "GCAGG":25510, "GCTAA":52278, "GCTAT":76880, "GCTAC":9839, "GCTAG":28961, "GCTTA":61615, "GCTTT":225833, "GCTTC":64083, "GCTTG":59206, "GCTCA":14071, "GCTCT":60635, "GCTCC":65236, "GCTCG":11169, "GCTGA":34473, "GCTGT":49104, "GCTGC":8795, "GCTGG":24131, "GCCAA":20627, "GCCAT":1037999, "GCCAC":14040, "GCCAG":14789, "GCCTA":10320, "GCCTT":48240, "GCCTC":61595, "GCCTG":12456, "GCCCA":37920, "GCCCT":50062, "GCCCC":71245, "GCCCG":4223, "GCCGA":5774, "GCCGT":43861, "GCCGC":4066, "GCCGG":10255, "GCGAA":385435, "GCGAT":566497, "GCGAC":28873, "GCGAG":302536, "GCGTA":527464, "GCGTT":796454, "GCGTC":115066, "GCGTG":278746, "GCGCA":7963, "GCGCT":7865, "GCGCC":5410, "GCGCG":103870, "GCGGA":261936, "GCGGT":382050, "GCGGC":47098, "GCGGG":223473, "GGAAA":10073933, "GGAAT":8742950, "GGAAC":103439, "GGAAG":6927846, "GGATA":8758892, "GGATT":10887365, "GGATC":202958, "GGATG":4712431, "GGACA":35014, "GGACT":45920, "GGACC":21071, "GGACG":297095, "GGAGA":4559972, "GGAGT":4388692, "GGAGC":62583, "GGAGG":2794837, "GGTAA":8562655, "GGTAT":11944030, "GGTAC":147635, "GGTAG":4662251, "GGTTA":12235737, "GGTTT":17496938, "GGTTC":353069, "GGTTG":6304630, "GGTCA":74263, "GGTCT":125971, "GGTCC":83375, "GGTCG":481838, 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"CCTGC":17714, "CCTGG":10136, "CCCAA":7203998, "CCCAT":4408777, "CCCAC":3396808, "CCCAG":88233, "CCCTA":5202275, "CCCTT":3628471, "CCCTC":2632031, "CCCTG":24585, "CCCCA":4056306, "CCCCT":3110390, "CCCCC":6650651, "CCCCG":259988, "CCCGA":504737, "CCCGT":247263, "CCCGC":198576, "CCCGG":15681, "CCGAA":1135380, "CCGAT":829147, "CCGAC":470838, "CCGAG":13123, "CCGTA":1291917, "CCGTT":412797, "CCGTC":346031, "CCGTG":19899, "CCGCA":238651, "CCGCT":244872, "CCGCC":217964, "CCGCG":95155, "CCGGA":11749, "CCGGT":8778, "CCGGC":11519, "CCGGG":8065, "CGAAA":2626105, "CGAAT":1478870, "CGAAC":919320, "CGAAG":34948, "CGATA":1545539, "CGATT":1035447, "CGATC":805337, "CGATG":8581, "CGACA":701053, "CGACT":521343, "CGACC":419965, "CGACG":238006, "CGAGA":23892, "CGAGT":10687, "CGAGC":8362, "CGAGG":13534, "CGTAA":1360673, "CGTAT":1748093, "CGTAC":603479, "CGTAG":18091, "CGTTA":854074, "CGTTT":786436, "CGTTC":344886, "CGTTG":13119, "CGTCA":569167, "CGTCT":447239, "CGTCC":272941, "CGTCG":2115480, "CGTGA":11337, "CGTGT":1832880, "CGTGC":8750, "CGTGG":51669, "CGCAA":581962, "CGCAT":395624, "CGCAC":244590, "CGCAG":12345, "CGCTA":491479, "CGCTT":375721, "CGCTC":230741, "CGCTG":5822, "CGCCA":331551, "CGCCT":199246, "CGCCC":189377, "CGCCG":786178, "CGCGA":212294, "CGCGT":126529, "CGCGC":95799, "CGCGG":5028, "CGGAA":2687239, "CGGAT":15076, "CGGAC":8228, "CGGAG":24100, "CGGTA":7783, "CGGTT":12872, "CGGTC":5496, "CGGTG":810976, "CGGCA":7630, "CGGCT":1019314, "CGGCC":12351, "CGGCG":7830, "CGGGA":39140, "CGGGT":7695, "CGGGC":5010, "CGGGG":24029, "GAAAA":7734332, "GAAAT":3338387, "GAAAC":1774501, "GAAAG":5074019, "GAATA":3001120, "GAATT":2169717, "GAATC":1461710, "GAATG":68230, "GAACA":1648053, "GAACT":1012232, "GAACC":733345, "GAACG":198942, "GAAGA":9580860, "GAAGT":344578, "GAAGC":298689, "GAAGG":5051943, "GATAA":2828918, "GATAT":1997191, "GATAC":1165418, "GATAG":78295, "GATTA":1937684, "GATTT":1556270, "GATTC":878490, "GATTG":16952, "GATCA":1529908, "GATCT":1819391, "GATCC":580828, "GATCG":3006385, "GATGA":73215, "GATGT":24252, "GATGC":9967, "GATGG":74719, "GACAA":1529663, "GACAT":939124, "GACAC":533275, "GACAG":21442, "GACTA":980191, "GACTT":653876, "GACTC":393649, "GACTG":9821, "GACCA":760162, "GACCT":440668, "GACCC":343744, "GACCG":113115, "GACGA":192071, "GACGT":178847, "GACGC":71859, "GACGG":12854, "GAGAA":8636735, "GAGAT":2842206, "GAGAC":1328608, "GAGAG":9199522, "GAGTA":459243, "GAGTT":338525, "GAGTC":281291, "GAGTG":1273776, "GAGCA":372075, "GAGCT":307588, "GAGCC":247622, "GAGCG":2172732, "GAGGA":10979974, "GAGGT":587951, "GAGGC":515114, "GAGGG":6976606, "GTAAA":1175264, "GTAAT":698672, "GTAAC":423211, "GTAAG":41935, "GTATA":784651, "GTATT":604893, "GTATC":989213, "GTATG":12019, "GTACA":476643, "GTACT":280409, "GTACC":183477, "GTACG":96692, "GTAGA":894680, "GTAGT":15746, "GTAGC":7303, "GTAGG":1600561, "GTTAA":652459, "GTTAT":1473627, "GTTAC":288966, "GTTAG":13651, "GTTTA":536496, "GTTTT":525656, "GTTTC":285077, "GTTTG":17256, "GTTCA":324219, "GTTCT":465086, "GTTCC":149807, "GTTCG":45522, "GTTGA":11559, "GTTGT":40013, "GTTGC":27268, "GTTGG":19191, "GTCAA":507644, "GTCAT":427004, "GTCAC":256192, "GTCAG":12511, "GTCTA":333813, "GTCTT":238098, "GTCTC":190884, "GTCTG":10817, "GTCCA":201650, "GTCCT":152418, "GTCCC":117897, "GTCCG":75524, "GTCGA":158583, "GTCGT":1993940, "GTCGC":775821, "GTCGG":45115, "GTGAA":37154, "GTGAT":13448, "GTGAC":8264, "GTGAG":47964, "GTGTA":2545777, "GTGTT":1234955, "GTGTC":121631, "GTGTG":135495, "GTGCA":11283, "GTGCT":133961, "GTGCC":8475, "GTGCG":4884, "GTGGA":77818, "GTGGT":827223, "GTGGC":11245, "GTGGG":119818, "GCAAA":690966, "GCAAT":420624, "GCAAC":234370, "GCAAG":15425, "GCATA":392978, "GCATT":285979, "GCATC":166576, "GCATG":7856, "GCACA":224606, "GCACT":164386, "GCACC":102992, "GCACG":43115, "GCAGA":30717, "GCAGT":13808, "GCAGC":8246, "GCAGG":16727, "GCTAA":450992, "GCTAT":407823, "GCTAC":191013, "GCTAG":6684, "GCTTA":277084, "GCTTT":306855, "GCTTC":176993, "GCTTG":7435, "GCTCA":211186, "GCTCT":318398, "GCTCC":102793, "GCTCG":47733, "GCTGA":9793, "GCTGT":989994, "GCTGC":6702, "GCTGG":11505, "GCCAA":334149, "GCCAT":292480, "GCCAC":142993, "GCCAG":10586, "GCCTA":201643, "GCCTT":160915, "GCCTC":102101, "GCCTG":8881, "GCCCA":157827, "GCCCT":128029, "GCCCC":126410, "GCCCG":43181, "GCCGA":71873, "GCCGT":745798, "GCCGC":28726, "GCCGG":5378, "GCGAA":138472, "GCGAT":89163, "GCGAC":54030, "GCGAG":14918, "GCGTA":80719, "GCGTT":51848, "GCGTC":2039729, "GCGTG":13739, "GCGCA":42210, "GCGCT":32190, "GCGCC":31760, "GCGCG":27450, "GCGGA":35099, "GCGGT":5000, "GCGGC":5948, "GCGGG":20186, "GGAAA":9588276, "GGAAT":2871570, "GGAAC":1475741, "GGAAG":10035733, "GGATA":2571832, "GGATT":1854706, "GGATC":1435313, "GGATG":91109, "GGACA":1316698, "GGACT":850616, "GGACC":695641, "GGACG":89393, "GGAGA":12812338, "GGAGT":646154, "GGAGC":568119, "GGAGG":9897957, "GGTAA":456423, "GGTAT":259271, "GGTAC":200320, "GGTAG":47469, "GGTTA":306552, "GGTTT":216812, "GGTTC":153626, "GGTTG":45905, "GGTCA":300352, "GGTCT":142110, "GGTCC":117231, "GGTCG":784046, "GGTGA":44136, "GGTGT":47817, "GGTGC":25876, "GGTGG":884587, "GGCAA":395882, "GGCAT":207029, "GGCAC":135779, "GGCAG":23826, "GGCTA":295982, "GGCTT":194699, "GGCTC":154036, "GGCTG":994246, "GGCCA":236537, "GGCCT":135887, "GGCCC":126333, "GGCCG":29916, "GGCGA":42894, "GGCGT":24479, "GGCGC":15431, "GGCGG":24661, "GGGAA":12969458, "GGGAT":3472947, "GGGAC":1755558, "GGGAG":11558998, "GGGTA":568042, "GGGTT":397476, "GGGTC":337082, "GGGTG":108576, "GGGCA":445179, "GGGCT":370130, "GGGCC":299555, "GGGCG":51047, "GGGGA":13315688, "GGGGT":833150, "GGGGC":685127, "GGGGG":56822985 }, "overrepresented_sequences": { } }, "read1_after_filtering": { "total_reads": 36627727, "total_bases": 5065717056, "q20_bases": 5017442236, "q30_bases": 4866068337, "q40_bases": 4866068337, "total_cycles": 141, "quality_curves": { 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"T":[39.6015,39.6251,39.6991,39.6541,39.6653,39.7164,39.6993,39.718,39.7006,39.6955,39.7184,39.7166,39.7386,39.688,39.6965,39.736,39.6824,39.7131,39.7171,39.6824,39.7144,39.6991,39.6735,39.6851,39.6837,39.6667,39.6749,39.6954,39.7015,39.6763,39.6756,39.6144,39.7013,39.6964,39.6897,39.5514,39.6437,39.6416,39.6004,39.6689,39.518,39.6404,39.5287,39.6214,39.6212,39.4175,39.3901,39.174,39.2531,39.144,39.15,39.182,39.195,39.1944,39.2514,39.1787,39.4232,39.4883,39.5584,39.5531,39.6295,39.5893,39.575,39.602,39.5935,39.5717,39.5548,39.5845,39.5671,39.5633,39.5367,39.5598,39.5349,39.569,39.5497,39.5704,39.5206,39.5587,39.5533,39.5224,39.5454,39.5192,39.4889,39.5017,39.5009,39.5254,39.4805,39.467,39.5031,39.4472,39.3888,39.4177,39.4148,39.4244,39.4205,39.4666,39.4577,39.371,39.3896,39.4176,39.4499,39.3991,39.4039,39.3864,39.4055,39.399,39.4109,39.4449,39.438,39.3768,39.3797,39.3799,39.4202,39.2888,39.412,39.3429,39.4004,39.3333,39.3421,39.3367,39.3817,39.3674,39.2932,39.2938,39.2754,39.2726,39.277,39.2703,39.2699,39.2711,39.2645,39.2442,39.2858,39.2515,39.2575,39.1887,39.1349,39.1774,39.0855,39.0369,38.7163], 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"ATGTC":379921, "ATGTG":11551623, "ATGCA":72769, "ATGCT":78495, "ATGCC":30448, "ATGCG":383170, "ATGGA":8574882, "ATGGT":10586682, "ATGGC":152254, "ATGGG":4311895, "ACAAA":155026, "ACAAT":136335, "ACAAC":21006, "ACAAG":48797, "ACATA":162569, "ACATT":186017, "ACATC":21454, "ACATG":81006, "ACACA":29391, "ACACT":19789, "ACACC":15758, "ACACG":400724, "ACAGA":65776, "ACAGT":76898, "ACAGC":8102, "ACAGG":33471, "ACTAA":102762, "ACTAT":117976, "ACTAC":17611, "ACTAG":41607, "ACTTA":112808, "ACTTT":329913, "ACTTC":89762, "ACTTG":78625, "ACTCA":49786, "ACTCT":71074, "ACTCC":464199, "ACTCG":9267, "ACTGA":55370, "ACTGT":76722, "ACTGC":9798, "ACTGG":31455, "ACCAA":48777, "ACCAT":408359, "ACCAC":26458, "ACCAG":12902, "ACCTA":12273, "ACCTT":58219, "ACCTC":67458, "ACCTG":10070, "ACCCA":14189, "ACCCT":80759, "ACCCC":94688, "ACCCG":5792, "ACCGA":7288, "ACCGT":10585, "ACCGC":2986, "ACCGG":5382, "ACGAA":716716, "ACGAT":913894, "ACGAC":76367, "ACGAG":387222, "ACGTA":980912, "ACGTT":1306298, "ACGTC":483108, "ACGTG":450594, "ACGCA":6680, "ACGCT":9048, "ACGCC":4859, "ACGCG":116502, "ACGGA":543678, "ACGGT":507966, "ACGGC":31702, "ACGGG":234437, "AGAAA":17752259, "AGAAT":15095958, "AGAAC":154132, "AGAAG":6538333, "AGATA":17586449, "AGATT":17772244, "AGATC":295626, "AGATG":7684914, "AGACA":52667, "AGACT":54337, "AGACC":21590, "AGACG":420508, "AGAGA":12965860, "AGAGT":7705708, "AGAGC":228701, "AGAGG":3922447, "AGTAA":13961474, "AGTAT":18585059, "AGTAC":199352, "AGTAG":7206667, "AGTTA":16697231, "AGTTT":26974805, "AGTTC":398785, "AGTTG":9712342, "AGTCA":452500, "AGTCT":133315, "AGTCC":89780, "AGTCG":496908, "AGTGA":8710311, "AGTGT":11384109, "AGTGC":101209, "AGTGG":3972915, "AGCAA":51302, "AGCAT":57695, "AGCAC":406890, "AGCAG":28899, "AGCTA":39523, "AGCTT":72294, "AGCTC":37083, "AGCTG":24199, "AGCCA":387385, "AGCCT":33355, "AGCCC":43456, "AGCCG":3746, "AGCGA":387636, "AGCGT":428662, "AGCGC":28023, "AGCGG":219337, "AGGAA":7293970, "AGGAT":6686990, "AGGAC":85069, "AGGAG":3453531, "AGGTA":7544562, "AGGTT":10481795, "AGGTC":167196, "AGGTG":4725312, "AGGCA":26777, "AGGCT":37404, "AGGCC":19594, "AGGCG":188214, "AGGGA":3517015, "AGGGT":4552110, "AGGGC":69493, "AGGGG":2897207, "TAAAA":43003206, "TAAAT":47639187, "TAAAC":466377, "TAAAG":16801589, "TAATA":40199522, "TAATT":48521341, "TAATC":641473, "TAATG":20556612, "TAACA":129584, "TAACT":154676, "TAACC":47813, "TAACG":837364, "TAAGA":13402638, "TAAGT":16415975, "TAAGC":558625, "TAAGG":7405447, "TATAA":42225695, "TATAT":68501323, "TATAC":639735, "TATAG":23014630, "TATTA":50645829, "TATTT":86509027, "TATTC":1068449, "TATTG":30797023, "TATCA":205000, "TATCT":393690, "TATCC":251849, "TATCG":1508713, "TATGA":19947300, "TATGT":31793549, "TATGC":259861, "TATGG":10773658, "TACAA":139358, "TACAT":207466, "TACAC":18596, "TACAG":79466, "TACTA":117880, "TACTT":226090, "TACTC":65631, "TACTG":70181, "TACCA":22675, "TACCT":51453, "TACCC":62882, "TACCG":7713, "TACGA":989321, "TACGT":1335249, "TACGC":65416, "TACGG":587987, "TAGAA":16990949, 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"CACTG":14504, "CACCA":413467, "CACCT":18206, "CACCC":29464, "CACCG":5536, "CACGA":10682, "CACGT":405322, "CACGC":4971, "CACGG":6345, "CAGAA":79062, "CAGAT":95241, "CAGAC":11313, "CAGAG":41446, "CAGTA":72907, "CAGTT":121691, "CAGTC":395926, "CAGTG":51426, "CAGCA":11379, "CAGCT":12703, "CAGCC":9718, "CAGCG":4919, "CAGGA":36392, "CAGGT":50707, "CAGGC":8565, "CAGGG":28704, "CTAAA":153699, "CTAAT":129457, "CTAAC":21494, "CTAAG":46734, "CTATA":168391, "CTATT":210442, "CTATC":30379, "CTATG":80906, "CTACA":17892, "CTACT":28054, "CTACC":14844, "CTACG":7639, "CTAGA":62040, "CTAGT":97259, "CTAGC":6719, "CTAGG":105057, "CTTAA":149748, "CTTAT":178164, "CTTAC":24862, "CTTAG":63588, "CTTTA":219026, "CTTTT":947840, "CTTTC":431063, "CTTTG":153227, "CTTCA":69488, "CTTCT":468909, "CTTCC":637627, "CTTCG":19321, "CTTGA":91322, "CTTGT":137821, "CTTGC":14613, "CTTGG":54302, "CTCAA":56965, "CTCAT":34883, "CTCAC":28508, "CTCAG":28008, "CTCTA":39503, "CTCTT":457647, "CTCTC":761292, "CTCTG":22715, "CTCCA":405868, "CTCCT":560095, "CTCCC":881787, "CTCCG":7163, "CTCGA":13910, "CTCGT":18144, "CTCGC":4864, "CTCGG":8448, "CTGAA":466051, "CTGAT":73932, "CTGAC":13170, "CTGAG":32715, "CTGTA":88472, "CTGTT":140921, "CTGTC":23049, "CTGTG":54960, "CTGCA":11752, "CTGCT":22712, "CTGCC":9786, "CTGCG":4351, "CTGGA":40376, "CTGGT":97656, "CTGGC":8117, "CTGGG":264615, "CCAAA":69132, "CCAAT":26963, "CCAAC":32154, "CCAAG":15508, "CCATA":405713, "CCATT":38765, "CCATC":398711, "CCATG":12448, "CCACA":16935, "CCACT":31185, "CCACC":28322, "CCACG":6303, "CCAGA":33032, "CCAGT":393715, "CCAGC":9741, "CCAGG":12395, "CCTAA":23966, "CCTAT":24338, "CCTAC":15198, "CCTAG":10835, "CCTTA":26133, "CCTTT":331982, "CCTTC":440300, "CCTTG":20694, "CCTCA":40405, "CCTCT":523475, "CCTCC":753481, "CCTCG":5850, "CCTGA":15749, "CCTGT":19727, "CCTGC":8686, "CCTGG":12276, "CCCAA":48334, "CCCAT":30432, "CCCAC":29804, "CCCAG":35191, "CCCTA":19603, "CCCTT":269437, "CCCTC":539397, "CCCTG":12010, "CCCCA":54768, "CCCCT":328395, "CCCCC":555757, "CCCCG":6797, "CCCGA":7117, "CCCGT":7948, "CCCGC":3922, "CCCGG":4464, "CCGAA":12899, "CCGAT":16037, "CCGAC":4406, "CCGAG":6348, "CCGTA":8342, "CCGTT":25040, "CCGTC":17592, "CCGTG":7398, "CCGCA":2943, "CCGCT":4325, "CCGCC":4236, "CCGCG":2793, "CCGGA":6845, "CCGGT":8718, "CCGGC":3976, "CCGGG":5839, "CGAAA":868545, "CGAAT":834047, "CGAAC":44892, "CGAAG":387324, "CGATA":1090440, "CGATT":1276104, "CGATC":106802, "CGATG":464629, "CGACA":7474, "CGACT":10049, "CGACC":5940, "CGACG":161135, "CGAGA":524208, "CGAGT":590199, "CGAGC":33184, "CGAGG":262487, "CGTAA":970932, "CGTAT":1263535, "CGTAC":91384, "CGTAG":448782, "CGTTA":1371153, "CGTTT":1983514, "CGTTC":139289, "CGTTG":532060, "CGTCA":16894, "CGTCT":460152, "CGTCC":16156, "CGTCG":229171, "CGTGA":418850, "CGTGT":720688, "CGTGC":36706, "CGTGG":244319, "CGCAA":7220, "CGCAT":8656, "CGCAC":3846, "CGCAG":4539, "CGCTA":6701, "CGCTT":14105, "CGCTC":7248, "CGCTG":4851, "CGCCA":3473, "CGCCT":6405, "CGCCC":6527, "CGCCG":2772, "CGCGA":130851, "CGCGT":176587, "CGCGC":20757, "CGCGG":91016, "CGGAA":525689, "CGGAT":681824, "CGGAC":74459, "CGGAG":266861, "CGGTA":578259, "CGGTT":828155, "CGGTC":71782, "CGGTG":306731, "CGGCA":4201, "CGGCT":20679, "CGGCC":5197, "CGGCG":90561, "CGGGA":263087, "CGGGT":390517, "CGGGC":32545, "CGGGG":244595, "GAAAA":20910051, "GAAAT":22470038, "GAAAC":229055, "GAAAG":8011080, "GAATA":15839676, "GAATT":20536403, "GAATC":299681, "GAATG":7870045, "GAACA":58313, "GAACT":461611, "GAACC":30124, "GAACG":330052, "GAAGA":7637966, "GAAGT":8439052, "GAAGC":109301, "GAAGG":3368839, "GATAA":16352832, "GATAT":23835965, "GATAC":246621, "GATAG":8904409, "GATTA":16739428, "GATTT":29317375, "GATTC":486620, "GATTG":10219799, "GATCA":72988, "GATCT":177043, "GATCC":133797, "GATCG":591366, "GATGA":8267262, "GATGT":11843651, "GATGC":107966, "GATGG":4362105, "GACAA":53739, "GACAT":64818, "GACAC":8436, "GACAG":32006, "GACTA":41340, "GACTT":90029, "GACTC":37137, "GACTG":27155, "GACCA":12293, "GACCT":28342, "GACCC":35538, "GACCG":4196, "GACGA":422139, "GACGT":623618, "GACGC":24750, "GACGG":323949, "GAGAA":7590817, "GAGAT":8113461, "GAGAC":108558, "GAGAG":9664291, "GAGTA":6571569, "GAGTT":9245346, "GAGTC":139087, "GAGTG":4995805, "GAGCA":159526, "GAGCT":37370, "GAGCC":19217, "GAGCG":219155, "GAGGA":3903440, "GAGGT":4354639, "GAGGC":59842, "GAGGG":2228444, "GTAAA":19069341, "GTAAT":19317420, "GTAAC":214561, "GTAAG":7144728, "GTATA":24237873, "GTATT":29178518, "GTATC":432640, "GTATG":11833851, "GTACA":72938, "GTACT":78525, "GTACC":26271, "GTACG":588401, "GTAGA":8677083, "GTAGT":10153863, "GTAGC":117734, "GTAGG":4454694, "GTTAA":19017936, "GTTAT":28285408, "GTTAC":331780, "GTTAG":9604371, "GTTTA":26527456, "GTTTT":46372219, "GTTTC":756128, "GTTTG":16358632, "GTTCA":137138, "GTTCT":276120, "GTTCC":154192, "GTTCG":890608, "GTTGA":11101183, "GTTGT":15320876, "GTTGC":151140, "GTTGG":5546995, "GTCAA":103480, "GTCAT":127737, "GTCAC":395741, "GTCAG":48830, "GTCTA":89816, "GTCTT":268850, 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"CTCCA":4495674, "CTCCT":3286514, "CTCCC":2292468, "CTCCG":264095, "CTCGA":725648, "CTCGT":383161, "CTCGC":262601, "CTCGG":475874, "CTGAA":75443, "CTGAT":51353, "CTGAC":28243, "CTGAG":23539, "CTGTA":51322, "CTGTT":43518, "CTGTC":25542, "CTGTG":383942, "CTGCA":25878, "CTGCT":23051, "CTGCC":13258, "CTGCG":3208, "CTGGA":31101, "CTGGT":5870, "CTGGC":5319, "CTGGG":66172, "CCAAA":17556376, "CCAAT":10491509, "CCAAC":5838204, "CCAAG":26296, "CCATA":10923951, "CCATT":8362376, "CCATC":4372807, "CCATG":35317, "CCACA":6218786, "CCACT":3991826, "CCACC":3522076, "CCACG":247243, "CCAGA":36252, "CCAGT":18385, "CCAGC":14197, "CCAGG":7292, "CCTAA":9791138, "CCTAT":8401441, "CCTAC":4422032, "CCTAG":17479, "CCTTA":7218991, "CCTTT":7076622, "CCTTC":3334856, "CCTTG":20606, "CCTCA":3949195, "CCTCT":3784877, "CCTCC":2296645, "CCTCG":253362, "CCTGA":31801, "CCTGT":23561, "CCTGC":13137, "CCTGG":7333, "CCCAA":6791013, "CCCAT":4231855, "CCCAC":3016335, "CCCAG":25086, "CCCTA":4986457, "CCCTT":3374169, "CCCTC":2261858, "CCCTG":18139, "CCCCA":3586481, "CCCCT":2741274, "CCCCC":4763589, "CCCCG":234135, "CCCGA":477179, "CCCGT":232775, "CCCGC":177413, "CCCGG":4613, "CCGAA":1085783, "CCGAT":769685, "CCGAC":447625, "CCGAG":4332, "CCGTA":945342, "CCGTT":393089, "CCGTC":320781, "CCGTG":6438, "CCGCA":224058, "CCGCT":227436, "CCGCC":196035, "CCGCG":89068, "CCGGA":4481, "CCGGT":3145, "CCGGC":4148, "CCGGG":2648, "CGAAA":2519829, "CGAAT":1433054, "CGAAC":883802, "CGAAG":8391, "CGATA":1499166, "CGATT":1003996, "CGATC":713431, "CGATG":6503, "CGACA":672688, "CGACT":501513, "CGACC":395770, "CGACG":226462, "CGAGA":6862, "CGAGT":4618, "CGAGC":2999, "CGAGG":3664, "CGTAA":1320936, "CGTAT":1396127, "CGTAC":579496, "CGTAG":4078, "CGTTA":827677, "CGTTT":761223, "CGTTC":330485, "CGTTG":4929, "CGTCA":547585, "CGTCT":418045, "CGTCC":257815, "CGTCG":541001, "CGTGA":5773, "CGTGT":392448, "CGTGC":3661, "CGTGG":4281, "CGCAA":557691, "CGCAT":379909, "CGCAC":229482, "CGCAG":4167, "CGCTA":475299, "CGCTT":359981, "CGCTC":211904, "CGCTG":3498, "CGCCA":297006, "CGCCT":185339, "CGCCC":170422, "CGCCG":447623, "CGCGA":203647, "CGCGT":115834, "CGCGC":90098, "CGCGG":2077, "CGGAA":32556, "CGGAT":4904, "CGGAC":3206, "CGGAG":3585, "CGGTA":3420, "CGGTT":4523, "CGGTC":3022, "CGGTG":378082, "CGGCA":2980, "CGGCT":377370, "CGGCC":4677, "CGGCG":3335, "CGGGA":10850, "CGGGT":2059, "CGGGC":2224, "CGGGG":4444, "GAAAA":2464944, "GAAAT":1359809, "GAAAC":702390, "GAAAG":739449, "GAATA":1210513, "GAATT":942321, "GAATC":560586, "GAATG":29853, "GAACA":641972, "GAACT":418831, "GAACC":312633, "GAACG":133927, "GAAGA":704002, "GAAGT":61402, "GAAGC":47713, "GAAGG":369037, "GATAA":1243647, "GATAT":968933, "GATAC":499922, "GATAG":28629, "GATTA":811703, "GATTT":779169, "GATTC":367840, "GATTG":6734, "GATCA":518159, "GATCT":824752, "GATCC":225524, "GATCG":122042, "GATGA":30559, "GATGT":9611, "GATGC":5535, "GATGG":25914, "GACAA":613099, "GACAT":401869, "GACAC":229535, "GACAG":7961, "GACTA":413903, "GACTT":307171, "GACTC":153820, "GACTG":5393, "GACCA":296973, "GACCT":181726, "GACCC":158329, "GACCG":71614, "GACGA":124866, "GACGT":87795, "GACGC":49433, "GACGG":3251, "GAGAA":793277, "GAGAT":389338, "GAGAC":169954, "GAGAG":543344, "GAGTA":74990, "GAGTT":60256, "GAGTC":40603, "GAGTG":381327, "GAGCA":56486, "GAGCT":46176, "GAGCC":37680, "GAGCG":122923, "GAGGA":628605, "GAGGT":55112, "GAGGC":43310, "GAGGG":353274, "GTAAA":853548, "GTAAT":512138, "GTAAC":315247, "GTAAG":12957, "GTATA":607919, "GTATT":482130, "GTATC":602270, "GTATG":6455, "GTACA":327917, "GTACT":196793, "GTACC":131918, "GTACG":86674, "GTAGA":365098, "GTAGT":6885, "GTAGC":3909, "GTAGG":383245, "GTTAA":468228, "GTTAT":694247, "GTTAC":208039, "GTTAG":5084, "GTTTA":415042, "GTTTT":401875, "GTTTC":215060, "GTTTG":9107, "GTTCA":215194, "GTTCT":250139, "GTTCC":102690, "GTTCG":38245, "GTTGA":7130, "GTTGT":10745, "GTTGC":11017, "GTTGG":6577, "GTCAA":307564, "GTCAT":291993, "GTCAC":174138, "GTCAG":5569, "GTCTA":250674, "GTCTT":169772, "GTCTC":126917, "GTCTG":5660, "GTCCA":122079, "GTCCT":95829, "GTCCC":77357, "GTCCG":67717, "GTCGA":100654, "GTCGT":458666, "GTCGC":397878, "GTCGG":10921, "GTGAA":14459, "GTGAT":8397, "GTGAC":5313, "GTGAG":13142, "GTGTA":732964, "GTGTT":390483, "GTGTC":42230, "GTGTG":14989, "GTGCA":5591, "GTGCT":16519, "GTGCC":4186, "GTGCG":2056, "GTGGA":14227, "GTGGT":390860, "GTGGC":5379, "GTGGG":19288, "GCAAA":398091, "GCAAT":257251, "GCAAC":143939, "GCAAG":6356, "GCATA":252217, "GCATT":187317, "GCATC":107270, "GCATG":5664, "GCACA":138068, "GCACT":100312, "GCACC":59367, "GCACG":35839, "GCAGA":8390, "GCAGT":7440, "GCAGC":5114, "GCAGG":6816, "GCTAA":282384, "GCTAT":251961, "GCTAC":119917, "GCTAG":2922, "GCTTA":178161, "GCTTT":194242, "GCTTC":120232, "GCTTG":4952, "GCTCA":123185, "GCTCT":120647, "GCTCC":56553, "GCTCG":33079, "GCTGA":6642, "GCTGT":381387, "GCTGC":4808, "GCTGG":7913, "GCCAA":176552, "GCCAT":169323, "GCCAC":84398, "GCCAG":5864, "GCCTA":122347, "GCCTT":88450, "GCCTC":57432, "GCCTG":6949, "GCCCA":87284, "GCCCT":66315, "GCCCC":68476, "GCCCG":32795, "GCCGA":53883, "GCCGT":394074, "GCCGC":20503, "GCCGG":2466, "GCGAA":103589, "GCGAT":75027, "GCGAC":42554, "GCGAG":3079, "GCGTA":62836, "GCGTT":40719, "GCGTC":407769, "GCGTG":3836, "GCGCA":33205, "GCGCT":26130, "GCGCC":24707, "GCGCG":19068, "GCGGA":3426, "GCGGT":2111, "GCGGC":2454, "GCGGG":3942, "GGAAA":1028394, "GGAAT":352195, "GGAAC":159667, "GGAAG":418394, "GGATA":344030, "GGATT":265525, "GGATC":171783, "GGATG":25612, "GGACA":149991, "GGACT":100716, "GGACC":82701, "GGACG":9824, "GGAGA":596485, "GGAGT":54742, "GGAGC":41038, "GGAGG":379825, "GGTAA":63508, "GGTAT":41268, "GGTAC":28019, "GGTAG":11867, "GGTTA":47717, "GGTTT":40591, "GGTTC":25515, "GGTTG":14233, "GGTCA":42849, "GGTCT":22092, "GGTCC":17751, "GGTCG":378170, "GGTGA":12799, "GGTGT":8602, "GGTGC":4422, "GGTGG":394944, "GGCAA":49389, "GGCAT":31473, "GGCAC":20173, "GGCAG":7605, "GGCTA":42007, "GGCTT":30631, "GGCTC":20668, "GGCTG":378942, "GGCCA":33727, "GGCCT":20210, "GGCCC":18911, "GGCCG":6209, "GGCGA":5581, "GGCGT":4667, "GGCGC":3262, "GGCGG":4524, "GGGAA":819334, "GGGAT":214404, "GGGAC":87061, "GGGAG":358034, "GGGTA":40204, "GGGTT":33136, "GGGTC":22041, "GGGTG":18574, "GGGCA":28357, "GGGCT":24728, "GGGCC":19683, "GGGCG":5368, "GGGGA":372691, "GGGGT":38191, "GGGGC":21196, "GGGGG":1181578 }, "overrepresented_sequences": { } }, "command": "fastp -i /mmfs1/gscratch/scrubbed/sr320/chil-wgbs/Qui2 (paired)_R1.fastq.gz -I /mmfs1/gscratch/scrubbed/sr320/chil-wgbs/Qui2 (paired)_R2.fastq.gz -o output/13-wgbs/trimmed/Qui2_R1.fq.gz -O output/13-wgbs/trimmed/Qui2_R2.fq.gz --detect_adapter_for_pe --trim_poly_g --trim_front1 10 --trim_front2 10 --length_required 50 --thread 16 --json output/13-wgbs/fastp/Qui2.fastp.json --html output/13-wgbs/fastp/Qui2.fastp.html " }