BAM´@HD VN:1.0 SO:unsorted @SQ SN:Chromosome_10A LN:41401248 @SQ SN:Chromosome_2A LN:98156180 @SQ SN:Chromosome_4A LN:93973257 @SQ SN:Chromosome_6A LN:76092957 @SQ SN:Chromosome_1B LN:231619483 @SQ SN:Chromosome_5B LN:125625032 @SQ SN:Chromosome_6B LN:129267145 @SQ SN:Chromosome_7B LN:183991082 @SQ SN:Chromosome_8B LN:108828118 @SQ SN:Chromosome_9B LN:91966420 @PG ID:Bismark VN:v0.25.1 CL:"bismark --genome data/13-wgbs-genome -1 output/13-wgbs/trimmed/Qui2_R1.fq.gz -2 output/13-wgbs/trimmed/Qui2_R2.fq.gz --score_min L,0,-0.6 --parallel 8 -p 2 --temp_dir /tmp/13-wgbs-Qui2-1874711 --output_dir output/13-wgbs/bismark" @PG ID:samtools PN:samtools PP:Bismark VN:1.22.1 CL:/mmfs1/gscratch/srlab/sr320/miniforge3/envs/myflow/bin/samtools view -bSh - @PG ID:samtools.1 PN:samtools PP:samtools VN:1.22.1 CL:/mmfs1/gscratch/srlab/sr320/miniforge3/envs/myflow/bin/samtools view -h /mmfs1/gscratch/scrubbed/sr320/github/project-ostrea-chil/output/13-wgbs/bismark/Qui2_R1.fq.gz.temp.1_bismark_bt2_pe.bam @PG ID:samtools.2 PN:samtools PP:samtools.1 VN:1.22.1 CL:/mmfs1/gscratch/srlab/sr320/miniforge3/envs/myflow/bin/samtools view --threads 4 -bSh - @PG ID:samtools.3 PN:samtools PP:samtools.2 VN:1.22.1 CL:/mmfs1/gscratch/srlab/sr320/miniforge3/envs/myflow/bin/samtools view -h --threads 1 output/13-wgbs/bismark/Qui2_pe.bam @PG ID:samtools.4 PN:samtools PP:samtools.3 VN:1.22.1 CL:/mmfs1/gscratch/srlab/sr320/miniforge3/envs/myflow/bin/samtools view -bS --threads 1 - Chromosome_10A »wChromosome_2A”¾ÙChromosome_4A ë™Chromosome_6A‰Chromosome_1B›;Î Chromosome_5BÈâ|Chromosome_6BÉu´Chromosome_7B*{÷ Chromosome_8BÖ•|Chromosome_9BÔK{