Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 21
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    67.6     68        0    4.5
Qui1     Qui    33.3     51        0    3.1
Qui2     Qui    38.8    134        0    4.9
Qui3     Qui    30.3     99        0    4.2
Qui4     Qui    45.3     95        0    3.2
Rio1     Rio    60.9    115        0    4.8
Rio2     Rio    66.3     86        0    4.6
Rio3     Rio    67.1     76        0    5.0
Rio4     Rio    90.3     72        0    6.6