Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    30.3     33        0   40.0
Qui1     Qui    50.0     16        0   17.0
Qui2     Qui    37.9     29        0   33.0
Qui3     Qui    40.0     30        0   39.0
Qui4     Qui    40.0     15        0   18.5
Rio1     Rio    11.1     27        0   36.0
Rio2     Rio     3.6     28        0   32.0
Rio3     Rio    22.0     41        0   47.0
Rio4     Rio    13.8     29        0   30.5