Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 29
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     22        0    2.9
Qui1     Qui    48.2     56        0    5.2
Qui2     Qui     2.5     40        0    4.3
Qui3     Qui    64.5     76        0    5.0
Qui4     Qui    84.5     58        0    4.7
Rio1     Rio     4.2     48        0    5.5
Rio2     Rio     1.7     59        0    4.2
Rio3     Rio     0.0     96        0    6.4
Rio4     Rio     5.9     68        0    6.9